| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 52495 = | 41 (0.840) | 52 (1.070) +T |
3/258 | NT | 58.3% | intergenic (+105/‑568) | USA300HOU_0043/USA300HOU_0044 | hypothetical membrane protein/possible transcriptional regulator |
| ? | CP000730 | = 52988 | 34 (0.700) | intergenic (+598/‑75) | USA300HOU_0043/USA300HOU_0044 | hypothetical membrane protein/possible transcriptional regulator | |||||
TTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAAT > CP000730/52358‑52634 | ttttttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTg > 2:355466/1‑141 (MQ=255) tttttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGa < 2:278439/141‑1 (MQ=255) ttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAACTGTTGTGGAAATCGAGTTAaat > 2:268223/1‑141 (MQ=255) ttAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGAAAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGaaaa > 2:308293/1‑140 (MQ=255) tAAAGCATTAGATGCCTTAGAGGAAGAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCCGGATAATGTAGTCTTAATCGTTGTGAAATACGAACAATGTTGTGGTAATCGCCTGAagta > 1:304304/1‑141 (MQ=255) gtactAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCa > 2:288942/5‑141 (MQ=255) cATTAGATGTCTAAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAACGGTTCTTGATTTCGCGTGAAATAATCag < 2:123537/141‑1 (MQ=255) cATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCag < 2:254503/141‑1 (MQ=255) cATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGAGTGAAATAATCag > 2:411014/1‑141 (MQ=255) aatcacgcgaagaacacgtgatctcatcatagtaatcctttgaaaccatcgtagtaatcgtgcgaaaatcgcgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCaga > 2:398938‑M1/127‑141 (MQ=255) aGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCATAGGa > 2:85749/1‑141 (MQ=255) gCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCg > 1:532454/1‑141 (MQ=255) tAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTg < 2:154218/141‑1 (MQ=255) aaaGAAATAGTTTTTCACTGAAAGTATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAAGCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATAGTTTGa > 2:408690/1‑141 (MQ=255) aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATTAGAGGAATCGTTTGaa < 1:283537/141‑1 (MQ=255) aaGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAAGCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGaa < 2:110060/141‑1 (MQ=255) cactctaaataatcaagtgaatattttgaaataataggaataatctcgtgaaaatcgcgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGaaa > 2:281398‑M1/113‑141 (MQ=255) aGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCg > 1:470149/1‑141 (MQ=255) gTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgt < 1:459534/141‑1 (MQ=255) ttttCACTGAAAATATTTATAGAAATAATTAAAATTAATTAATATCAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCgtag < 2:185625/141‑1 (MQ=255) aatGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATc < 1:180249/139‑1 (MQ=255) aCTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATc < 2:444145/141‑1 (MQ=255) cTGAGAATATTTATAGTTATAATTAAAATTAAGTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACG‑AAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgc < 2:200001/141‑1 (MQ=255) aaaTATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgcg > 1:236917/1‑141 (MQ=255) tatTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaa < 2:132841/141‑1 (MQ=255) tttATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAGTCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAt < 2:31714/141‑1 (MQ=255) ttATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATc > 1:561413/1‑141 (MQ=255) taATTAAAATTAATTAATATTAAGCAAGGATAATGTAGTCTTAAGCGTTCTGAAATACGAAAAATGTTGTGGAAAGCGCGTGAAACAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAaat < 2:246144/141‑1 (MQ=255) aaattaaTTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCag > 1:546121/1‑141 (MQ=255) aattaattAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCAAGATCAATAAACaga > 1:59974/1‑141 (MQ=37) aattaattAATATTAAGCCAGGATAATGTAGTCTGAATCGTTCTGAACTACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga < 1:75589/141‑1 (MQ=255) aattaatATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGaa < 2:328836/141‑1 (MQ=255) ttAAGCCAGGAAAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGa < 1:569138/141‑1 (MQ=255) cacataaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGaaa > 1:268223‑M1/58‑141 (MQ=255) aGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAat > 1:114062/1‑141 (MQ=255) cgtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTg < 1:140889‑M1/59‑1 (MQ=255) gtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGaa > 2:240670‑M1/55‑60 (MQ=255) gtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGaa < 1:240670‑M1/6‑1 (MQ=255) gtgaaataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAatca < 1:564353‑M1/87‑1 (MQ=255) aataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaaa < 2:492379‑M1/52‑1 (MQ=255) ataatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTg < 1:273524‑M1/26‑1 (MQ=255) ataatcagaggaatcgtttgaaatcatcgtagcaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGGAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCgta > 1:382644‑M1/50‑141 (MQ=255) taatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGttt > 1:185872‑M1/49‑73 (MQ=255) taatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGttt < 2:185872‑M1/25‑1 (MQ=255) taatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCAc < 1:567286‑M1/56‑1 (MQ=255) aaatcagaggtatcgtttgaaatcatcgtagtaatcgcgcaaaaatcgCGTGTAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGCTAATCACGTGAAATATTCAGGGGAATCGTTTGAAAGCATCgtag > 2:304304‑M1/49‑141 (MQ=255) actccgtggaatcgtctgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGCGGAATCGTTTGAACGCATCgtagt > 1:418597‑M1/48‑141 (MQ=255) aatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGaaa < 1:522246‑M1/29‑1 (MQ=255) aatcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGaaa > 2:522246‑M1/48‑76 (MQ=255) tcagaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTaa < 2:78071‑M1/96‑1 (MQ=255) agaggaaacgtttgaaaaaatactaaaaattgcgtgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATc > 2:532454‑M1/44‑141 (MQ=255) gaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGttt > 2:473324‑M1/43‑122 (MQ=255) gaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGttt < 1:473324‑M1/80‑1 (MQ=255) gaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcg < 1:504868‑M1/99‑1 (MQ=255) gaggaatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcg < 2:321003‑M1/99‑1 (MQ=255) gTCTTAAACGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGAGCGAAAATCACTTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgc < 1:444695/141‑1 (MQ=255) agctgaaTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgc < 1:554669/136‑1 (MQ=255) aatcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgcg > 1:177836‑M1/39‑141 (MQ=255) atcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGttt < 2:348340‑M1/25‑1 (MQ=255) atcgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa > 1:457563‑M1/38‑141 (MQ=255) aaTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaa < 1:511833/141‑1 (MQ=255) cgtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGGAATAATAAGCGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaa < 2:177836‑M1/106‑1 (MQ=255) aTCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAACTAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGaaa > 1:530835/1‑141 (MQ=255) gtttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGa < 2:432612‑M1/18‑1 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCagag > 2:562476‑M1/34‑49 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCagag < 2:308628‑M1/16‑1 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCagag < 1:562476‑M1/16‑1 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCagag > 1:308628‑M1/34‑49 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgcg > 1:183832‑M1/34‑81 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATcgcgcg < 2:183832‑M1/48‑1 (MQ=255) tttgaaatcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAt > 1:519146‑M1/34‑141 (MQ=255) cGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAt > 1:281398/1‑141 (MQ=255) cTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACg > 2:519146/1‑141 (MQ=255) atcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa > 1:486350‑M1/28‑76 (MQ=255) atcatcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGa < 2:486350‑M1/49‑1 (MQ=255) taataaaagtaatggagtgaaaataaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGa > 2:228529‑M1/27‑141 (MQ=255) catcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa < 1:433765‑M1/116‑1 (MQ=255) catcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa > 1:321003‑M1/26‑141 (MQ=255) atcgtagtaatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGa < 1:88636‑M1/82‑1 (MQ=255) atagtaaaaattgcgggaaaatcaCGTGAAATAATCAGAGGAAACGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaaa > 1:308293‑M1/25‑141 (MQ=255) taagAAAAATGTTGTGGAAATCGAGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTTAAATAATCAGAGGAATCGTGTGAAATCATCGTAGTAATCGCGAGAAAAACACGTGattt > 2:113094/4‑138 (MQ=14) aaatctcgtgaaaatcaTGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCag > 1:411014‑M1/18‑141 (MQ=255) aaaTGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCag > 1:375303/1‑141 (MQ=255) taTGCTGTGCAAATCTCGTGAAATAATGTGAGGAAACGTTTGAAGTCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga < 2:530835/140‑1 (MQ=11) aatcgcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCaga > 1:288942‑M1/17‑141 (MQ=255) tgttgtGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATGATCGTAGTAATCGCGCGAAAATCACGAGAAATAATCAGAgg > 1:398938/1‑141 (MQ=255) tcgcgcgaaaatcaTGGGAAATAATCAAGGGAAACGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGATGAATCGTTTGAAATCTTCGTAGTCATCGCGCGAAAATCACGTGAAATAATCTGAgg > 1:408690‑M1/15‑141 (MQ=255) gcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGaa < 2:426269‑M1/61‑1 (MQ=255) gcgcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATAGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAataagagaaa < 2:216821‑M1/129‑4 (MQ=255) gtgGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAAGCACGTGAAATAATCAGAGGAATc > 1:446574/1‑141 (MQ=25) gcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt < 1:189507‑M1/79‑1 (MQ=255) gcgaaaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt > 2:189507‑M1/11‑89 (MQ=255) gcgaaaatcaCGCGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt > 2:72974‑M1/11‑89 (MQ=255) gcgaaaatcaCGCGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGtt < 1:72974‑M1/79‑1 (MQ=255) cgaaaatccCGTGAAATAAGCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAGAATCACGTGAAATAATCAGAGGAACCGTTTGAAATCATCGGAGTAATCGCGCGAaaataacgtgaaataatacgggaaaacg < 1:343219‑M1/132‑12 (MQ=255) aaatcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGttt > 1:85749‑M1/7‑141 (MQ=255) atcaCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGa > 1:541963‑M1/5‑141 (MQ=255) aCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAAt < 1:355005‑M1/140‑1 (MQ=255) | TTTTTTAAAGCATTAGATGCCTTAAAGAAATAGTTTTTCACTGAAAATATTTATAGATATAATTAAAATTAATTAATATTAAGCCAGGATAATGTAGTCTTAATCGTTCTGAAATACGAAAAATGTTGTGGAAATCGCGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAATCATCGTAGTAATCGCGCGAAAATCACGTGAAATAATCAGAGGAATCGTTTGAAAT > CP000730/52358‑52634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |