| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 1,963,768 | C→G | 100% | V365L (GTA→CTA) | hemG ← | protoporphyrinogen oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 1,963,768 | 0 | C | G | 100.0% | 290.6 / NA | 86 | V365L (GTA→CTA) | hemG | protoporphyrinogen oxidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (44/42); total (44/42) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TACTTTTCGGCAAACGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTACATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACCATCATGGGTATTTTCAATGTCTT > CP000730/1963630‑1963905 | tACTTTTCGGCAAACGATTGACAATTGTAAATTCAGGATCACCGTTAAATGCCATCATTTGACTTAAATCTCTACTTACTATCGATACTAACTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGAt < 2:263878/141‑1 (MQ=255) aCTTTTCGGCAAACGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATa > 2:311815/1‑141 (MQ=255) cgtaaaaCGCTTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAACCGATACTAATTCATTATCTGTATGCTCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACg < 2:96586/137‑1 (MQ=255) cGGTAAACGATTGACAATTTTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACg < 2:98247/141‑1 (MQ=255) cGGCAAACGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCCCg > 1:687573/1‑141 (MQ=255) cGGCAAACGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACg < 1:699453/141‑1 (MQ=255) cGGCAAACGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACg < 1:730063/141‑1 (MQ=255) cGGCAAACGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACg < 2:740234/141‑1 (MQ=255) cGGCAAACGATTGACAATTGTAAATTCAGGAGCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCCATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACg < 1:328897/141‑1 (MQ=255) aCGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCaa > 1:668444/1‑141 (MQ=255) gATTGACAATTGTAAATTCAGGATCACCCTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCaaaa < 1:480670/141‑1 (MQ=255) tGACAATTGTGAATTCAGGAGCACCGTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTCGATACGCACGAATCAAAacct > 2:393124/1‑141 (MQ=255) tGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAacct > 1:711295/1‑141 (MQ=255) tGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATAATCTCTATGATCATCAACCACAGAATCACCTGGTTTACCTAGATACGCACGAATCAAAccct > 2:287529/1‑141 (MQ=255) gtgaTTGTATATTCAGGAGCACCGTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAacctta < 2:601381/138‑1 (MQ=255) aCAATTTTAAATTCATGATCACCTTTAAATGTCATTATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCGAGCGCAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAacctta < 2:694534/141‑1 (MQ=255) aCAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAacctta < 2:456774/141‑1 (MQ=255) ttGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAaccttacctt < 1:509845/141‑1 (MQ=255) aaTTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATGCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAAACTTACCTTCCGgt > 1:782677/1‑141 (MQ=255) cAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACTAAACTACCCATAGGTTTACCTCGCTACGAGAAAATCAAAAACTTACATTGCGGTgtag > 1:183749/1‑141 (MQ=255) ttagcTTTAAATGGCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGCATCTAAACCTTACCTTCCGGTGTAGTAAAt < 2:173428/137‑1 (MQ=255) tCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAAt < 1:475667/141‑1 (MQ=255) tAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTAGGATCATCAACCACAGTATCACCTGGGTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGGGTAGAAAAGGGACAtt > 1:256405/1‑141 (MQ=255) aTGTCGTCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCAttttt < 1:702845/141‑1 (MQ=255) aTGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCAttttt < 1:266779/141‑1 (MQ=255) ttcatcaTTTGACTGAAATCTCTACGTAAAATCGATACTAATTCATTATCTGTATGACCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTc < 2:417433/140‑1 (MQ=255) gTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTc < 1:445412/141‑1 (MQ=255) gTCAGCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTc < 1:225591/141‑1 (MQ=255) ttAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCCACCAAAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTGTCGATGTCCAAGTAc > 1:68723/1‑141 (MQ=255) aaaTCTCTTCGTACAATCGATTCTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACAt < 1:335543/141‑1 (MQ=255) aaaTCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACAt > 2:722113/1‑141 (MQ=255) aaTCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATg > 1:444562/1‑141 (MQ=255) aaTCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTAGATGTCCAAGTACATg < 2:800292/141‑1 (MQ=255) caCGTACAATCGATACTAATTCATTATCTGCATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTaa < 1:495432/140‑1 (MQ=255) gTACCATCGATACTAATTCATTATCTGTATGAGCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGCACATGCGGTAATGt < 2:549296/141‑1 (MQ=255) gTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGt > 1:169055/1‑141 (MQ=255) gTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGt < 2:187880/141‑1 (MQ=255) gTACAATCGATACTAATTCAGTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAAGCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGt < 2:417382/141‑1 (MQ=255) acacTCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCt > 2:496370/1‑141 (MQ=255) aCAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTGCATGCGGTAATGTCt > 1:324822/1‑141 (MQ=255) aCAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAACTACATGCGGTAATGTCt > 2:786116/1‑141 (MQ=255) aTCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTa > 1:144455/1‑141 (MQ=255) tCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTATACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCTTTTTTTAATTACATGCGGTAATGTCTGTAt > 2:595408/1‑141 (MQ=255) gctACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATTCTCACGAATCAAAACCTTACCTTCCGGTATATTAACTCGCCATTTTTTTGATTTCCAAGTACATTCGGTAGTGTCTGTATCa > 2:316345/3‑141 (MQ=255) gATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCa > 2:629524/1‑141 (MQ=255) gATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCa > 2:682048/1‑141 (MQ=255) gATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCa < 2:407233/141‑1 (MQ=255) gATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCa > 1:687626/1‑141 (MQ=255) gATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCa > 2:502463/1‑141 (MQ=255) gATACTAATTCATTATCTGTATGATCATCAACCACAGTAGCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATcc > 2:68687/1‑140 (MQ=255) caTACTAATTCACTATCTGTATGATCATCAACCACATTATCACCTGGTTTACCTAGATACGGACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCa < 2:44565/140‑1 (MQ=255) ttcattcattcTCTGTATGATCATCAACCACAGTATCACCTGGTTTCCCTAGATCCGCACGACTCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCg < 1:397714/138‑1 (MQ=255) gtAATTCATTCTCTGTATTATCATCAACCACAGTATCCCCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCg < 1:397762/140‑1 (MQ=255) cTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCg > 1:282758/1‑141 (MQ=255) tAATTCCTTATCTGTATGACCAGCAACCACAGTATCACCTTTTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCTATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGt < 2:21944/141‑1 (MQ=255) aaaatCATTATCTGTATGATCATCAACCACAGAATCAACTCGTTTACATAGATCCACACGAATAAAAACCTTACCTTCGTGTGTAGTATATTGCCAGTTTTCCGGTCGTTTAGTCCATGCGGTAATGTCTGAATCA‑CTCGt < 2:775533/137‑1 (MQ=255) aTTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGc < 2:24782/141‑1 (MQ=255) ttATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGACACGCACGAATCGAAACCTTACCTTCCGATGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATTCGGTAATGTCTGTATCA‑CTCGTTCTCGCa > 1:321127/1‑141 (MQ=255) tATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCaa < 1:478170/141‑1 (MQ=255) tATCTGGATGATCATCAACCACAGTATCACCTGGTTTACCTAGACACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATTGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCaa < 1:38272/141‑1 (MQ=255) aTCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCC‑CTCGTTCTCGCAAt > 2:417997/1‑141 (MQ=255) tGTATGATCACCAACCACGGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGGACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTAc < 2:1022/141‑1 (MQ=255) aTGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCC‑CTCGTTCTCGCAATTACGaa > 2:7038/1‑141 (MQ=255) aTGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGaa < 1:740909/141‑1 (MQ=255) aTGATCATCAACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGaa > 2:688441/1‑141 (MQ=255) catcaACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCC‑CCCGTTCTCGCAATTACGAAGCCAg > 2:12789/1‑141 (MQ=255) catcaACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAg > 2:761790/1‑141 (MQ=255) catcaACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTAGCA‑CTCGTTCTCGCAATTACGAGGCCAg > 1:339918/1‑141 (MQ=255) cagcaACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGT‑TCATATCTTGCTCGCAATTACGAAGCCAg < 1:595408/138‑1 (MQ=255) atcaACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGt > 2:720488/1‑141 (MQ=255) tcaACCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTa > 1:636978/1‑141 (MQ=255) aaCCACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTAcc > 2:794186/1‑141 (MQ=255) ccACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCTTTGTTTATTTACATGCGGAAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACcat > 2:539103/1‑141 (MQ=255) ccACAGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACcat > 2:679287/1‑141 (MQ=255) cacaGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACcatc < 1:776807/141‑1 (MQ=255) aGTATCACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACCATCATg < 2:441693/141‑1 (MQ=255) cACCTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑TTCGTTCTCGCAATTACGAAGCCAGTACCATCATGGGTAt < 1:429109/141‑1 (MQ=255) ccTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACcatccagggaaata > 1:277930/1‑131 (MQ=255) ccTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CCCGTTCTCGCAATTACGAAGCCAGTACCACCATGGGCAttt > 2:21779/1‑141 (MQ=255) ccTGGTTTACCTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTATGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACCATCATGGGTGttt > 2:93789/1‑141 (MQ=255) tACCTAGATACTCACGAAGCAAAACCTTACCTTCCGTTATTGTAAATTGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATGA‑ATCGTTGCCGGAATTACGAAGCCAGTACCATCATGGGTATTTTCAATGt < 2:333065/141‑1 (MQ=255) tACCTAGATACGCCCGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACCATCATGGGTATTTTCAATGt < 2:68246/141‑1 (MQ=255) ccTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTTTTTTTTCAATTACATGCGGTAAGGTCTGTATCA‑CTCGTTCTCGCAATTACAAAGCCAGTACAATCATTGGTATTTTCAAttgct > 2:618920/1‑137 (MQ=255) ccTAGATACGCACGAATCAAAACCTTACCTGCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACCATCATGGGTATTTTCAATGTCt > 1:239888/1‑141 (MQ=255) ccTAGATACGCACGAATCAAAACATTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGCAGCCAGTACCATCATGGGTATTTTCAATGTCt > 2:319656/1‑141 (MQ=255) cTAGATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACCATCATGGGTATTTTCAATGTCtt > 2:85829/1‑141 (MQ=255) | TACTTTTCGGCAAACGATTGACAATTGTAAATTCAGGATCACCTTTAAATGTCATCATTTGACTTAAATCTCTACGTACAATCGATACTAATTCATTATCTGTATGATCATCAACCACAGTATCACCTGGTTTACCTACATACGCACGAATCAAAACCTTACCTTCCGGTGTAGTAAATGGCCATTTTTTCGATGTCCAAGTACATGCGGTAATGTCTGTATCA‑CTCGTTCTCGCAATTACGAAGCCAGTACCATCATGGGTATTTTCAATGTCTT > CP000730/1963630‑1963905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |