Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	1,120,712	G→C	7.5%	R67P (CGC→CCC)	ylaN →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	1,120,712	0	G	C	7.5%	188.2 / 2.1	63	R67P (CGC→CCC)	ylaN	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (26/32);  new base C (3/2);  total (29/34)
Fisher's exact test for biased strand distribution p-value = 6.54e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

GAAATCTTGCATCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTGAGCTGCGCCGATTTTAT  >  CP000730/1120573‑1120852                                                                                                                                            |                                                                                                                                             gaAATCTTGCATCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCCAAAAGAAGTTGATTTTGCTGGTAAATTAGGTTTAGGTGACcgc                                                                                                                                             >  2:767288/1‑141 (MQ=255) gaAATCTGGCATCCGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACcgc                                                                                                                                             <  2:574461/141‑1 (MQ=255)    aTCTTGCATCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGaa                                                                                                                                          <  1:208017/141‑1 (MQ=255)        tGCATCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGCTTTAGTTGACCGCGAAGATg                                                                                                                                      <  1:524903/141‑1 (MQ=255)        tGCATCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATGATATGAAGAAGTACTAGATACACAAATGTTTGGGCTTCAAAAAGAAGTTGATTTTGCTGTTAAGTTCGGTGTAGTTGACAGCGAAGATg                                                                                                                                      >  1:237166/1‑141 (MQ=255)            tCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGcaa                                                                                                                                  >  2:753720/1‑141 (MQ=255)                     aGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTAt                                                                                                                         >  1:691753/1‑141 (MQ=255)                     aGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTAt                                                                                                                         >  2:844042/1‑141 (MQ=255)                      atacAAATAGAAAATTAAACAACACCTTCATGCCCATTATATAAAGAAGTACGAGATACACAAAAAAAAAAAAAAAAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATg                                                                                                                        <  2:567133/138‑1 (MQ=255)                       ttCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGGCGCCGACGCTGGCAAGCAAAttggat                                                                                                                       >  1:279439/1‑137 (MQ=255)                       ttCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCCCGAAGATGGCAAACAAATTATGt                                                                                                                       >  2:112003/1‑141 (MQ=255)                       ttCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTAATAGAAACACAAATGTTTGGCATTAATCTTGACGAAAAAGTCTCGGTTAAACGAGCGTTAGTTGACCCCGAAGATGGCAAACAAATTAGGt                                                                                                                       >  2:392933/1‑141 (MQ=255)                          aaCTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTAc                                                                                                                    >  2:57448/1‑141 (MQ=255)                            cgagacaagtaaaCAGTACCTGCATGCCCATGATATGACGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGGTGATTTTGCTGTTAAATTAGGTTTAGTTGACTGCGAAGATGGCAAACAAATTATGTTACGt                                                                                                                  <  2:145377/130‑1 (MQ=255)                            cTAGATGATTTAACATTACCGTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGt                                                                                                                  <  1:840862/141‑1 (MQ=255)                                      tAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGagaaag                                                                                                        <  1:515896/141‑1 (MQ=255)                                      tAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGagaaag                                                                                                        >  1:815611/1‑141 (MQ=255)                                       aaCATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGagaaaga                                                                                                       >  1:435874/1‑141 (MQ=255)                                             aCCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTc                                                                                                 <  1:753720/141‑1 (MQ=255)                                               cTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGCCTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTGTCaa                                                                                               >  1:308523/1‑141 (MQ=255)                                                     gCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGTCCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTAc                                                                                         <  1:767288/141‑1 (MQ=255)                                                     gCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTAc                                                                                         <  2:705655/141‑1 (MQ=255)                                                      cccATTATATGAAGAAGTACTAGATACACAATTGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACa                                                                                        <  2:439839/141‑1 (MQ=255)                                                        cATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATg                                                                                      <  2:299308/141‑1 (MQ=255)                                                         aTTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGa                                                                                     >  1:244833/1‑141 (MQ=255)                                                            ataagagaatgTACTAGATACACATATGTTTGTACTTCAAAAAGAAGTTGATTTGGCTGTTAAATTAGGTTTAGGTGACCGCGAAGATGTCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGc                                                                                  <  2:26821/131‑1 (MQ=255)                                                             tatGAAGAAGTACTAGGTACACAAATGTTTGGAGTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCt                                                                                 <  2:689038/141‑1 (MQ=255)                                                                aaacaagTTCTGGATACACAACGGTTTGGACTTCAAAAAGAAGTTGCTTTTGCTGTTAAATTACGTTTAGTTGACCGCGACGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCtttt                                                                              <  2:205029/137‑1 (MQ=255)                                                                    aagTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTacac                                                                          <  2:556845/141‑1 (MQ=255)                                                                    aagTACTAGATACACAAAGGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTacac                                                                          <  1:680422/141‑1 (MQ=255)                                                                        aCTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGt                                                                      <  2:257957/141‑1 (MQ=255)                                                                                    aaTGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAat                                                          >  2:466281/1‑141 (MQ=255)                                                                                     aTGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAata                                                         >  2:788299/1‑141 (MQ=255)                                                                                         ttGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAAtatata                                                     <  1:139667/141‑1 (MQ=255)                                                                                              cTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCat                                                >  2:608301/1‑141 (MQ=255)                                                                                                  aaaacGAAATTGATTTTGCTGTTAAATTAGATTTAGTTGACCGCGGAGATTGCAATCAGATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACATGTTTAAGGTTTAATATATAAGCttatta                                            >  2:417118/1‑141 (MQ=255)                                                                                                  aaaaaGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTa                                            >  1:77653/1‑141 (MQ=255)                                                                                                  aaaaaGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTa                                            >  2:363343/1‑141 (MQ=255)                                                                                                  aaaaaGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGAATATTa                                            >  2:416824/1‑141 (MQ=255)                                                                                                   aaaaaaAGTTGAGTTGGCTGTTAAATTAGGTTTAGTTGACCGGGAAGATGGCAAACAAATTATGTTACGGCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTaa                                           <  2:237166/141‑1 (MQ=255)                                                                                                    aaaGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTaaa                                          <  1:125726/141‑1 (MQ=255)                                                                                                     aagaagTTGATTTTGCTGGTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTaaaa                                         <  2:802300/141‑1 (MQ=255)                                                                                                      agaagTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAAt                                        >  1:553668/1‑141 (MQ=255)                                                                                                        aagTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATgg                                      >  2:401654/1‑141 (MQ=255)                                                                                                          gTTGATTTTGCTGTTAAATGAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCg                                    <  2:271191/141‑1 (MQ=255)                                                                                                            tgatcttgccactAAATTAGTCTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTAAGTCCTGAGAAAGAACTTTCAAAATTACAAGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTg                                  <  2:298404/129‑1 (MQ=255)                                                                                                             gATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTga                                 >  1:574037/1‑141 (MQ=255)                                                                                                              aTTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTgag                                <  2:168340/141‑1 (MQ=255)                                                                                                                 ttgttgTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGGTTAATATATACGCATATTAAAATGGCGTGAGata                             <  2:733057/141‑1 (MQ=255)                                                                                                                 ttcgtttttaaTTACTTTGAGTTGACCGTGAAGATTGCAAACAAATTTTGTTACGTCTTGAGAAATAACTTTCAAAATTACATGAAGCCTTTACACGTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGata                             <  2:306705/132‑1 (MQ=255)                                                                                                                 ttGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGata                             <  2:815611/141‑1 (MQ=255)                                                                                                                   ggtGTTAAATTAGGTGTAGTTGCCCGAGCAGCTGGCAAACAAATCATGGTACGGCGTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATc                           <  2:595464/139‑1 (MQ=255)                                                                                                                   gCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATc                           >  2:403039/1‑141 (MQ=255)                                                                                                                    cTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTCAGGTTTAATATATAAGCATATTAAAATGCTGGGAGATATCg                          >  2:151142/1‑141 (MQ=255)                                                                                                                    cTGTTAAAATCGGTCTATTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCg                          >  2:840064/1‑141 (MQ=255)                                                                                                                         aaaTTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAAt                     >  2:630813/1‑141 (MQ=255)                                                                                                                              aGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTGAGc                <  1:57448/141‑1 (MQ=255)                                                                                                                               ggTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGATTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTggggt               >  2:340474/1‑137 (MQ=255)                                                                                                                                 tttAGTTTGCCGCGAAGATGGCAAACAAATTATGTTACGTCTTGATAAAGAACTTTCAATATTACATGAAGCTTTTACACTTGTTTAAGTTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTGAGCTgc             <  2:847639/141‑1 (MQ=255)                                                                                                                                        gACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTGAGCTGCGCCGAtt      >  1:503252/1‑141 (MQ=255)                                                                                                                                        gACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTGAGCTGCGCCGAtt      <  1:605456/141‑1 (MQ=255)                                                                                                                                        gACCCCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTGAGCTGCGCCGAtt      <  1:112003/141‑1 (MQ=255)                                                                                                                                        gACCCCGAAGATGGCAAACAAAGTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGAAAATTGAGCTGCGCCGAtt      <  1:392933/141‑1 (MQ=255)                                                                                                                                          ccGCGAAGATGGCAAACAATGTAGGTTACGTCTTGAGAAAGAACTTTCAAAATCACATGAAGCTTTTACACTTGTTGAAGGTTTAATATACACGCAGATTAAAATGGCGTGAGATATCGACAATTGAGCTGCGCCGAtttt    <  1:166505/141‑1 (MQ=255)                                                                                                                                          ccGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGCTATCGACAATTGCGCTCGGCCGAtttg    >  2:378139/1‑140 (MQ=255)                                                                                                                                            gcgAAGATGGCAGACAAATTATGTTACGTCTTGAGAATTGACTTTCGAAAGTACAGGAAGCTTTTACACTTGTCTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATAGCGACAATGGATCTGCGCCGAatttct  >  2:568444/1‑139 (MQ=255)                                                                                                                                            |                                                                                                                                             GAAATCTTGCATCTGATTAAAGTTCAACTAGATAATTTAACATTACCTTCATGCCCATTATATGAAGAAGTACTAGATACACAAATGTTTGGACTTCAAAAAGAAGTTGATTTTGCTGTTAAATTAGGTTTAGTTGACCGCGAAGATGGCAAACAAATTATGTTACGTCTTGAGAAAGAACTTTCAAAATTACATGAAGCTTTTACACTTGTTTAAGGTTTAATATATAAGCATATTAAAATGGCGTGAGATATCGACAATTGAGCTGCGCCGATTTTAT  >  CP000730/1120573‑1120852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑