New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 891847	80 (0.910)	4 (0.080) +GGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGT	3/160	10.2	7.4%	coding (61/147 nt)	USA300HOU_0844	hypothetical protein
	?	CP000730	= 2031785	95 (1.080)					coding (51/291 nt)	USA300HOU_1886	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAG  >  CP000730/891710‑891985                                                                                                                                          |                                                                                                                                           aTTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAact                                                                                                                                         <  1:424874/141‑1 (MQ=255)  ttGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAacta                                                                                                                                        <  2:44686/141‑1 (MQ=255)  ttGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAacta                                                                                                                                        <  1:216045/141‑1 (MQ=255)    gggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactact                                                                                                                                      >  2:229942/1‑141 (MQ=255)     ggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                                                                     >  1:659125/1‑141 (MQ=255)     ggAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                                                                     >  1:628375/1‑141 (MQ=255)       ttcccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGcc                                                                                                                                   >  1:555462/4‑141 (MQ=255)       ttcccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGcc                                                                                                                                   >  1:481184/4‑141 (MQ=255)         tCCAATTTCTCTTTGTTGGGGCCCATCCCCATCTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCACTCAACTACTGCCaa                                                                                                                                 <  2:617259/141‑1 (MQ=255)          ccAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAat                                                                                                                                <  1:259481/141‑1 (MQ=255)             aTTTCTCTTTGTTGGGGCCCATCTCCAACTTGCATTGCCTGTAGAATGTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGGCTAGAATTGAAAAAAGCTTGTTAGAAGCGCATTTTCGTTCAGTCAACTACTGCAAAtata                                                                                                                             >  2:876793/1‑141 (MQ=14)              tttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATaa                                                                                                                            >  1:904059/1‑141 (MQ=255)              aattctctgtatgGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATaa                                                                                                                            <  1:638554/130‑1 (MQ=255)              aattctctgtatgGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATaa                                                                                                                            <  1:638534/130‑1 (MQ=255)               ttCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGAGTTCGGGCCCCGGACTAGAATGCAAAAAAGCGTGGTACAAGCGCCTTTTCGTTCAGTCAACTACTGCCAATATAAc                                                                                                                           >  1:287660/1‑141 (MQ=14)                tctcTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACt                                                                                                                          <  1:146486/141‑1 (MQ=255)                     ttgttgGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGtt                                                                                                                     >  2:87319/1‑140 (MQ=255)                        ttgGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTagag                                                                                                                  <  1:65066/141‑1 (MQ=255)                           gggCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTCGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCACTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCAt                                                                                                               <  1:426846/141‑1 (MQ=255)                           ggcaccATCCCGAACTTGCATTGCCTGTAGAATTGCTTTTCGAAATTCTCTGTGTTGGGGCCACTGACTAGAATTGAAAAAAGCATGTTACAAGCGAATTTTCGTTCAGTCCACTACTGCAAATATAACTTCGTAGAGCAt                                                                                                               <  1:901796/137‑1 (MQ=11)                            ggCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATa                                                                                                              <  2:957681/141‑1 (MQ=38)                             gCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAg                                                                                                             <  1:676627/141‑1 (MQ=38)                                cATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAGAATGCTAGTTGCGAGCGCTTTTTTGGTTAACCAACTACAGCCGATAGAACTTGCTAGAGCATAggaa                                                                                                          >  2:814502/1‑138 (MQ=11)                                cATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAAc                                                                                                          >  1:915758/1‑141 (MQ=35)                                 aTCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACa                                                                                                         >  2:665165/1‑141 (MQ=34)                                 aTCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACa                                                                                                         <  2:824737/141‑1 (MQ=34)                                   ccccAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACAtt                                                                                                       <  2:256078/141‑1 (MQ=32)                                    cccAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTg                                                                                                      >  1:397196/1‑141 (MQ=32)                                     ccAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGa                                                                                                     <  2:746641/141‑1 (MQ=32)                                        aCTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTTAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGAttt                                                                                                  >  2:519008/1‑141 (MQ=17)                                        aCTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGAttt                                                                                                  >  1:389024/1‑141 (MQ=32)                                         cTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGGATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTa                                                                                                 >  1:627754/1‑141 (MQ=17)                                          ttGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTATAAGCGCATTTTCGTTCAGTGAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTAt                                                                                                >  2:965083/1‑141 (MQ=17)                                                tGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCa                                                                                          <  2:122003/141‑1 (MQ=32)                                                 gCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAg                                                                                         <  1:73438/141‑1 (MQ=32)                                                  ccTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGc                                                                                        >  2:71334/1‑141 (MQ=32)                                                     gTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAACAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTg                                                                                     >  1:497864/1‑141 (MQ=17)                                                     gTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTg                                                                                     <  2:326028/141‑1 (MQ=32)                                                      tAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGATTTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACGACTGCCAATCTAACTTCTTAGAGCATAGAACATTGTTTTATTTCCCAGCCTGt                                                                                    >  2:500476/1‑141 (MQ=11)                                                       aGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGtt                                                                                   >  2:745767/1‑141 (MQ=34)                                                         aaTTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGtttt                                                                                 <  1:307241/141‑1 (MQ=35)                                                           tttCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCa                                                                               <  1:674479/141‑1 (MQ=38)                                                              cTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATaa                                                                            >  2:965830/1‑141 (MQ=39)                                                                 ttCGAAATTCTCGTTGTTGGGGCCCCTGTCTAGAATTGAAAAAAGCTTGTTCCAAGCGGATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGCACATTGATTTATGTCCCAGCCTGTTTTCATAAGcc                                                                         <  2:649638/141‑1 (MQ=14)                                                                 taagactaactctGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGcc                                                                         <  2:775171/132‑1 (MQ=255)                                                                   cGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCcac                                                                       <  1:489340/141‑1 (MQ=255)                                                                     aaaTTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAg                                                                     <  2:287660/141‑1 (MQ=255)                                                                      aaTTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGc                                                                    >  1:859347/1‑141 (MQ=255)                                                                        ttCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTa                                                                  >  1:916960/1‑141 (MQ=255)                                                                            ctGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAAtgt                                                              <  2:265413/141‑1 (MQ=255)                                                                             tgtgTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAAtgtg                                                             <  2:24724/141‑1 (MQ=255)                                                                                 ttGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAATTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTAtt                                                         <  1:57458/141‑1 (MQ=255)                                                                                  tGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTAttt                                                        >  1:399248/1‑141 (MQ=255)                                                                                       ccccTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTaaaaa                                                   <  1:6531/141‑1 (MQ=255)                                                                                           tGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAgg                                               <  2:540581/141‑1 (MQ=255)                                                                                             aCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGaa                                             >  2:319053/1‑141 (MQ=255)                                                                                               tAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATa                                           <  1:581677/141‑1 (MQ=255)                                                                                                 gAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACa                                         >  2:352628/1‑141 (MQ=255)                                                                                                 gAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACa                                         <  1:324362/141‑1 (MQ=255)                                                                                                   gtttgccagtcagtGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATg                                       <  1:297431/128‑1 (MQ=255)                                                                                                    ttGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGa                                      <  2:252015/141‑1 (MQ=255)                                                                                                    ttGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGa                                      <  1:281481/141‑1 (MQ=255)                                                                                                        aaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTaa                                  >  1:565009/1‑141 (MQ=255)                                                                                                        aaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTaa                                  <  1:673652/141‑1 (MQ=255)                                                                                                        aaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTaa                                  <  1:392774/141‑1 (MQ=255)                                                                                                           aaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAAc                               >  2:512498/1‑141 (MQ=255)                                                                                                           aaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAAc                               <  1:241395/141‑1 (MQ=255)                                                                                                            aGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACt                              >  2:499662/1‑141 (MQ=255)                                                                                                                 gTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGc                         <  1:41504/141‑1 (MQ=255)                                                                                                                  ttACAGGCGCATGTACGTTCAGTCAACTACTTCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGACTGTTTTCATACGCCACAGCTAATACGACTCGAAAAATATGAGTACATGAGTAAAACTCATGCa                        <  2:291448/141‑1 (MQ=18)                                                                                                                  ttACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCa                        <  1:964930/141‑1 (MQ=255)                                                                                                                   ttcAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCAt                       >  2:436852/3‑141 (MQ=255)                                                                                                                       aGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAACCTGTTTTCATAAACCACAACTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGa                   <  2:541477/141‑1 (MQ=255)                                                                                                                        gcgcATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGaa                  >  2:438058/1‑141 (MQ=255)                                                                                                                        gcgcATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGaa                  >  2:407373/1‑141 (MQ=255)                                                                                                                         cgcATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGGAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGaaa                 <  2:487820/141‑1 (MQ=255)                                                                                                                            aTTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATAc              <  1:205143/141‑1 (MQ=255)                                                                                                                               ttCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATAAGTAATAAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTaa           <  2:915758/141‑1 (MQ=255)                                                                                                                                      aGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTaa    <  1:677604/141‑1 (MQ=255)                                                                                                                                        tCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAGACTCATGCATAAGAAATACTAATTTCTAAAg  <  1:963582/141‑1 (MQ=255)                                                                                                                                          |                                                                                                                                           ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCATCCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGTTTTCATAAGCCACAGCTAATGTGTATTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTAAAG  >  CP000730/891710‑891985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.