New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1098235	85 (0.960)	4 (0.080) +GGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTGT	3/160	10.2	7.2%	intergenic (+214/+135)	ktrC/rnjA	possible Trk family potassium (K+) transporter, NAD+ binding protein/metallo‑beta‑lactamase
	?	CP000730	= 2031785	95 (1.080)					coding (51/291 nt)	USA300HOU_1886	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCTTTTTGATTATTT  >  CP000730/1098100‑1098375                                                                                                                                          |                                                                                                                                             gggAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactac                                                                                                                                         <  1:104246/141‑1 (MQ=255) ggattcccAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTG‑AAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactact                                                                                                                                        >  2:408589/7‑141 (MQ=255)   gAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                                                                       <  2:534297/141‑1 (MQ=255)       ccAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                                                                                                                                   >  1:854628/1‑141 (MQ=255)        cAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAat                                                                                                                                  <  2:588005/141‑1 (MQ=255)         aaTTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAata                                                                                                                                 <  1:891902/141‑1 (MQ=255)          aTTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAat                                                                                                                                  <  1:892230/141‑1 (MQ=255)           tttCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAAtata                                                                                                                               >  1:57718/1‑141 (MQ=255)            ttCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATaa                                                                                                                              >  2:693172/1‑141 (MQ=40)              ctctTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACt                                                                                                                            >  1:83828/1‑141 (MQ=39)               tctTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAAATGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACtt                                                                                                                           <  2:140677/141‑1 (MQ=38)                  ttgttgGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGt                                                                                                                        >  1:205280/1‑141 (MQ=39)                  ttgttgGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGt                                                                                                                        <  2:496632/141‑1 (MQ=38)                   tgttgGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTa                                                                                                                       <  1:609286/141‑1 (MQ=38)                    gttgGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTag                                                                                                                      >  1:421999/1‑141 (MQ=39)                    gttgGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTag                                                                                                                      <  1:961727/141‑1 (MQ=38)                     ttgGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTaga                                                                                                                     <  2:1006/141‑1 (MQ=38)                        gggCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCa                                                                                                                  >  2:717926/1‑141 (MQ=38)                          gCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGCCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCAtt                                                                                                                >  1:820820/1‑141 (MQ=255)                          gCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCAtt                                                                                                                >  1:408640/1‑141 (MQ=39)                                 ccccAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACAtt                                                                                                         <  1:581428/141‑1 (MQ=255)                                   ccAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGa                                                                                                       <  2:808003/141‑1 (MQ=255)                                   ccAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGa                                                                                                       <  2:693047/141‑1 (MQ=40)                                    cAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGAt                                                                                                      >  1:204483/1‑141 (MQ=40)                                      aCTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAGTTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGAttt                                                                                                    >  1:821777/1‑141 (MQ=255)                                      aCTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAACGAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACCGCCAATATAACTTTGTAGAGCAtgtgtacttttggg                                                                                                    >  1:779169/1‑128 (MQ=11)                                           cATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGtc                                                                                               <  2:378889/141‑1 (MQ=39)                                             ttGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGtctc                                                                                             <  2:253381/141‑1 (MQ=40)                                             ttGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGtctc                                                                                             <  2:272818/141‑1 (MQ=40)                                              tGCCTGTAGAATTTCTTGTCGAAAT‑‑TCTCGATGGTGGGGCCCCTGACTAGAGTTGAAAAAAGCTGGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTGTGTAGATCAGTGAACATTGAGTTATGTCTCa                                                                                            >  2:340449/1‑141 (MQ=14)                                               gCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCaa                                                                                           >  1:363001/1‑141 (MQ=255)                                                ccTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAg                                                                                          >  2:898308/1‑141 (MQ=255)                                                 cTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGc                                                                                         <  2:138174/141‑1 (MQ=255)                                                   gTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCtc                                                                                       >  1:157636/1‑141 (MQ=255)                                                    tAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCtca                                                                                      <  1:821036/141‑1 (MQ=255)                                                        aTTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTcatcat                                                                                  <  1:907110/141‑1 (MQ=255)                                                         tttCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCata                                                                                 >  2:147032/1‑141 (MQ=255)                                                            cTTTTCGAAAT‑‑TCTCTATGTTGGTGCCGCTGACTAGCGTTGAAAAAAGCTTGTTACAAGCGGATTTTCGTTCAGTCAAAGACTGCCAATATAACTTTGTAAAGCATTGAACATTGATTTATGTCTCAAGTTCATCatatat                                                                              <  2:362715/141‑1 (MQ=17)                                                              tttCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATaa                                                                            <  2:70922/141‑1 (MQ=255)                                                               ttCGAAAT‑‑TCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCtcaatgcagtgtga                                                                           >  2:897952/1‑130 (MQ=255)                                                                tCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAg                                                                          <  1:23470/141‑1 (MQ=255)                                                                    aaT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGaaaa                                                                      >  2:184673/1‑141 (MQ=255)                                                                      t‑‑tCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGaaaaaa                                                                    >  2:859757/1‑140 (MQ=255)                                                                      t‑‑tCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAg                                                                    >  1:216072/1‑141 (MQ=255)                                                                        gtgtctATGTGGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAAAAAAAg                                                                    >  2:189156/4‑141 (MQ=255)                                                                          ctctATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGct                                                                  <  2:421999/141‑1 (MQ=255)                                                                            ctATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGctac                                                                <  1:609768/141‑1 (MQ=255)                                                                            ctATGTTGGGGCCCCTGACTAGAATTAAAAAAAGCTTGTTACAAGAGCATTTTCGGTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCACAAGCTCATCATATATAAAGAAAAAGctac                                                                <  1:852091/141‑1 (MQ=255)                                                                             tATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGctact                                                               >  2:91400/1‑141 (MQ=255)                                                                             tATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTAAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGctact                                                               >  1:222676/1‑141 (MQ=255)                                                                              aTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGgtacta                                                              <  2:738873/141‑1 (MQ=255)                                                                                    gtgCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATg                                                        <  2:709014/139‑1 (MQ=255)                                                                                    gggCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACa                                                           >  2:771482/1‑138 (MQ=255)                                                                                    gggCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACa                                                           <  1:771482/138‑1 (MQ=255)                                                                                      gCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATggg                                                      >  2:169642/1‑141 (MQ=255)                                                                                      gCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATggg                                                      >  2:385826/1‑141 (MQ=255)                                                                                       ccccTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGggt                                                     <  2:827604/141‑1 (MQ=255)                                                                                       ccccTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGggt                                                     >  2:511980/1‑141 (MQ=255)                                                                                        cccTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAGTATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGggtg                                                    >  1:758102/1‑141 (MQ=255)                                                                                         ccTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGggtgg                                                   <  1:137200/141‑1 (MQ=255)                                                                                             aCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAg                                               >  1:468493/1‑141 (MQ=255)                                                                                                  aaTTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTttaa                                          <  2:307315/141‑1 (MQ=255)                                                                                                    ttGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTttaatt                                        >  2:55102/1‑141 (MQ=255)                                                                                                     tGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTttaatta                                       <  2:408640/141‑1 (MQ=255)                                                                                                      gAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTttaattaa                                      >  1:803042/1‑141 (MQ=255)                                                                                                       aaaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTaaa                                     <  2:202988/141‑1 (MQ=255)                                                                                                        aaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTaaaa                                    >  2:948241/1‑141 (MQ=255)                                                                                                        aaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTaaaa                                    >  1:839786/1‑141 (MQ=255)                                                                                                           aaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTGATTAAAactt                                 <  1:441618/141‑1 (MQ=255)                                                                                                           aaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAactt                                 >  1:620304/1‑141 (MQ=255)                                                                                                              cTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAacttcac                              >  1:369895/1‑141 (MQ=255)                                                                                                               ttGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAacttcact                             >  1:842412/1‑141 (MQ=255)                                                                                                                tGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAacttcactt                            >  1:457502/1‑141 (MQ=255)                                                                                                                  ttACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAActtcacttca                          <  1:789041/141‑1 (MQ=255)                                                                                                                    aCAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAGGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCaaa                        >  1:45842/1‑141 (MQ=255)                                                                                                                       aGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGtt                     <  1:717926/141‑1 (MQ=255)                                                                                                                        gcgcCTTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTta                    >  2:488273/1‑141 (MQ=255)                                                                                                                               ttCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCtt             >  2:559275/1‑141 (MQ=255)                                                                                                                                tCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTTCTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCttt            <  1:267274/141‑1 (MQ=255)                                                                                                                                 cGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCtttt           <  1:664263/141‑1 (MQ=255)                                                                                                                                  gTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCttttt          <  2:653898/141‑1 (MQ=255)                                                                                                                                        tCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCTTTTTGattat    <  2:629112/141‑1 (MQ=255)                                                                                                                                         cAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTGCTAACAATGGGTGGTGAGTTTACTTAAAACTTCACTTCAAAGTTAGTAGCTTTTTGattatt   >  1:725676/1‑141 (MQ=255)                                                                                                                                          aaCTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCTTTTTGAttattt  <  1:957859/141‑1 (MQ=255)                                                                                                                                          aaCTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCTTTTTGAttattt  <  1:957860/141‑1 (MQ=255)                                                                                                                                          |                                                                                                                                             GGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAAT‑‑TCTCTATGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCATCATATATAAAGAAAAAGCTACTAACAATGGGTGGTGAGTTTAATTAAAACTTCACTTCAAAGTTAGTAGCTTTTTGATTATTT  >  CP000730/1098100‑1098375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.