New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2031785	95 (1.080)	4 (0.080) +ACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCC	3/160	10.2	7.7%	coding (51/291 nt)	USA300HOU_1886	hypothetical protein
	?	CP000730	= 2866882	72 (0.820)					intergenic (‑281/+172)	USA300HOU_2711/noc	hypothetical membrane protein/possible transcriptional regulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTGTCTTTT  >  CP000730/2866742‑2867019                                                                                                                                             |                                                                                                                                           ggTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCa                                                                                                                                            <  1:525761/141‑1 (MQ=255)   ttCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAac                                                                                                                                          <  2:94718/141‑1 (MQ=255)     cAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAacta                                                                                                                                        >  2:609371/1‑141 (MQ=255)      aaaTGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactac                                                                                                                                       <  1:538201/141‑1 (MQ=255)      aaaTGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactac                                                                                                                                       >  2:610845/1‑141 (MQ=255)        aTGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                                                                     >  1:705175/1‑141 (MQ=255)            aaGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                                                                                                                                 <  2:777693/141‑1 (MQ=255)               tataTCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTATTGCCAatat                                                                                                                              <  1:867046/141‑1 (MQ=255)               tataTCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                                                              <  2:672575/141‑1 (MQ=255)                atatCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAAtata                                                                                                                             >  1:268714/1‑141 (MQ=255)                atatCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAAtata                                                                                                                             >  1:268491/1‑141 (MQ=255)                atatCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAAtata                                                                                                                             <  1:116689/141‑1 (MQ=255)                  atCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAc                                                                                                                           <  2:364442/141‑1 (MQ=255)                   tCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACt                                                                                                                          >  2:705734/1‑141 (MQ=255)                      aGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAATATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTTCCAATATAACTTCg                                                                                                                       <  2:645256/141‑1 (MQ=255)                      aGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCg                                                                                                                       <  1:425679/141‑1 (MQ=255)                         tCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTag                                                                                                                    >  1:51697/1‑141 (MQ=255)                           aaaTTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTAGTagag                                                                                                                  >  1:971558/1‑141 (MQ=255)                               tAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATa                                                                                                              >  2:948189/1‑141 (MQ=255)                                aGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAg                                                                                                             >  2:664479/1‑141 (MQ=255)                                  ggAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGaa                                                                                                           >  1:843493/1‑141 (MQ=255)                                    aGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACa                                                                                                         >  2:66163/1‑141 (MQ=255)                                           cAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGAttt                                                                                                  <  2:548760/141‑1 (MQ=255)                                           cAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGAttt                                                                                                  >  1:147942/1‑141 (MQ=255)                                            aGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTa                                                                                                 <  2:332401/141‑1 (MQ=255)                                                       tttCGCAAAATTTATTTCGTCGTCCCACCCCGGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCATTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTGTGTCCCAGCCt                                                                                      >  1:58233/1‑141 (MQ=14)                                                            cAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCa                                                                                 <  1:970383/141‑1 (MQ=255)                                                              aaaTTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAAc                                                                               >  1:567134/1‑141 (MQ=255)                                                               aaTTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACa                                                                              >  2:532134/1‑141 (MQ=255)                                                               aaTTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACa                                                                              >  2:323293/1‑141 (MQ=255)                                                                  ttatttCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACANTGATTTATGTACNAGCCTGATCAACatat                                                                           <  1:611716/141‑1 (MQ=255)                                                                     tttCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACatataaa                                                                        >  2:204680/1‑141 (MQ=255)                                                                      ttCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACatataaat                                                                       >  2:882584/1‑141 (MQ=255)                                                                       tcgtcgTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACatataaata                                                                      >  1:152562/1‑141 (MQ=255)                                                                        cgtcgtCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACatataaatat                                                                     <  1:13611/141‑1 (MQ=255)                                                                        cgtcgtCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACatataaatat                                                                     <  2:960321/141‑1 (MQ=255)                                                                        cgtcgtCCCACCCCAGCAAGGTTGAAAAAAAAAAAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCG‑AGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACatataaatata                                                                    <  2:243462/141‑1 (MQ=18)                                                                              cccACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAAttt                                                               >  2:154834/1‑141 (MQ=255)                                                                                  ccccAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTAt                                                           <  1:145272/141‑1 (MQ=255)                                                                                     cAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGTGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGtt                                                        <  1:725592/141‑1 (MQ=255)                                                                                              tGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTaaa                                               <  1:610845/141‑1 (MQ=255)                                                                                               gACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTaaaa                                              >  2:305995/1‑141 (MQ=255)                                                                                                aCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATTAACATATAAAGATAAATTTTTATGTTTCACGTAAAAc                                             <  1:766401/141‑1 (MQ=255)                                                                                                aCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGtttaaaaaaaaaa                                             <  2:177162/141‑11 (MQ=255)                                                                                                aCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAc                                             <  1:204680/141‑1 (MQ=255)                                                                                                aCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAc                                             >  2:59151/1‑141 (MQ=255)                                                                                                 cTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑a                                           >  1:417466/1‑141 (MQ=255)                                                                                                   aGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑aaa                                         >  2:877497/1‑141 (MQ=255)                                                                                                         gAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAAGATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑aaaaaaaaa                                   >  2:929352/1‑141 (MQ=255)                                                                                                         gAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCAAGTaaaaa‑aaaaaaaaa                                   <  2:38893/141‑1 (MQ=255)                                                                                                           aaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGa                                 >  2:436649/1‑141 (MQ=255)                                                                                                            aaaaGCTTGTTACAAGCGCATTTTCGTTAAGTCAACTACTGACAATATAACTTCGTAGAGAATAGAACATTGATTTATGTACCAGCCTAATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAA‑AAAAAAAAAGAc                                <  2:150946/141‑1 (MQ=21)                                                                                                             aaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACa                               <  1:948189/141‑1 (MQ=255)                                                                                                               aGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACaaa                             >  1:877657/1‑141 (MQ=255)                                                                                                                gCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGGCTAGGTAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAg                            >  2:282806/1‑141 (MQ=255)                                                                                                                  ttGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCt                          >  2:265642/1‑141 (MQ=255)                                                                                                                   tGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAACAAAAAAAAAAGACAAAGCt                          >  2:628196/1‑141 (MQ=255)                                                                                                                          aGCGCATTTTCGTTCAGTCAACTACTGCCATTATCACTTCGTAGAGCATAGAACATTGATTTATGTACAAGCCTGATCAACATATAAATATAAATTTTTATATTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGAt                  <  2:480804/141‑1 (MQ=255)                                                                                                                          aGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACCTTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGAt                  <  1:587041/141‑1 (MQ=255)                                                                                                                          aGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGAt                  <  1:223259/141‑1 (MQ=255)                                                                                                                          aGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGAt                  <  1:748475/141‑1 (MQ=255)                                                                                                                           gcgcATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATc                 >  1:521927/1‑141 (MQ=255)                                                                                                                                ttttCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGc            <  1:538009/141‑1 (MQ=255)                                                                                                                                 tttCGTTAAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCt           <  2:934547/141‑1 (MQ=255)                                                                                                                                   tCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCttt         <  1:362682/141‑1 (MQ=255)                                                                                                                                   tCGTTCAGTCAACTACTGCAAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCttt         <  1:195594/141‑1 (MQ=255)                                                                                                                                   aaattCTGTCAACTACTGTCAATTTAACTTTGAATAGCATAGAACATTGATATATTTACCAGCCTAATAAAAATATAAATATAAATTTTTATTTTTCAAAAAAAAA‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCttt         <  2:605917/138‑1 (MQ=255)                                                                                                                                    cattCAGTCAACTATTGTTAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGAACAAAAAAAAAAAATAAATTTTTAAATTTCACAAAAAAA‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTg        <  1:52630/139‑1 (MQ=21)                                                                                                                                    cGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCtttt        >  1:330750/1‑140 (MQ=255)                                                                                                                                        cAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTGTCtt    >  2:100344/1‑141 (MQ=255)                                                                                                                                         aGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTGTCttt   <  1:323293/141‑1 (MQ=255)                                                                                                                                         aGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTGTCttt   <  1:958053/141‑1 (MQ=255)                                                                                                                                          gtaaaCTACTGCAAATATAACTTCGTAGAGAATAGAACATTAAATTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATATTTCACGTAAAAA‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTGTCtttt  <  2:456559/138‑1 (MQ=255)                                                                                                                                             |                                                                                                                                           GGTTCAAATGAAAGTATATCCAGCTCAAATTAGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAGCAAGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTCGTAGAGCATAGAACATTGATTTATGTACCAGCCTGATCAACATATAAATATAAATTTTTATGTTTCACGTAAAAC‑AAAAAAAAAGACAAAGCTGTTATGATCTTAGCTTTGTCTTTT  >  CP000730/2866742‑2867019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.