New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 800977	85 (0.960)	4 (0.080) +ACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGGCCCC	3/160	10.2	7.0%	intergenic (+111/‑240)	hisC1/USA300HOU_0748	histidinol‑phosphate transaminase/hypothetical protein
	?	CP000730	= 1470058	100 (1.130)					intergenic (‑105/‑240)	USA300HOU_1370/rnhA	hypothetical protein/possible ribonuclease H
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTGACTTTTCGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTAAACACGTGTTA  >  CP000730/1469919‑1470197                                                                                                                                            |                                                                                                                                            gCTGACTTTTCGTCATCTTCTGTGTTGGGACTCACACCCCAGGTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGGTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTAGAAGCGCATTTTCGTTCAGGCaa                                                                                                                                            >  2:661176/1‑141 (MQ=11)  cTGACTTTTCGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAac                                                                                                                                           >  1:955936/1‑141 (MQ=39)       ttttCGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGTCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactactt                                                                                                                                      >  2:445621/1‑140 (MQ=255)       ttttCGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAactactt                                                                                                                                      >  2:711034/1‑140 (MQ=38)       ttttCGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                                                                      >  2:845398/1‑141 (MQ=38)       ttttCGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                                                                      >  1:452501/1‑141 (MQ=39)           cGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCaa                                                                                                                                  <  2:329169/141‑1 (MQ=38)            gTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAat                                                                                                                                 >  2:869901/1‑141 (MQ=39)              cATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                                                               >  1:639247/1‑141 (MQ=38)                tcttctGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATaa                                                                                                                             <  2:752462/141‑1 (MQ=35)                  ttctGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACa                                                                                                                           <  2:974875/141‑1 (MQ=35)                     tgtgTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCg                                                                                                                        <  1:135317/141‑1 (MQ=38)                     tgtgTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCg                                                                                                                        <  2:969428/141‑1 (MQ=37)                      gtgtTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGt                                                                                                                       >  2:562418/1‑141 (MQ=38)                      gtgtTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGt                                                                                                                       >  2:238301/1‑141 (MQ=39)                       tgtTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTa                                                                                                                      <  1:335631/141‑1 (MQ=39)                        gtTGGGACCCACACCCCACCTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTag                                                                                                                     <  1:959882/141‑1 (MQ=37)                          tGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTagag                                                                                                                   <  1:255023/141‑1 (MQ=38)                              ccccACCCCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATa                                                                                                               <  1:777298/140‑1 (MQ=25)                               cccACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAg                                                                                                              <  1:41769/141‑1 (MQ=35)                                ccACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGa                                                                                                             >  1:460574/1‑141 (MQ=35)                                ccACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTG‑AAAAAGCTTGTGACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGaa                                                                                                            >  1:91683/1‑141 (MQ=255)                                  acacCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAAc                                                                                                           >  1:715921/1‑141 (MQ=34)                                    acCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACAt                                                                                                         >  2:218049/1‑141 (MQ=34)                                      cccAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTg                                                                                                       >  1:184632/1‑141 (MQ=34)                                       ccAACTCGCATTGCCTGTAGAATTTATTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGa                                                                                                      >  1:637834/1‑141 (MQ=21)                                         aaCTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGAtt                                                                                                    >  2:365209/1‑141 (MQ=35)                                          ccTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGAttt                                                                                                   <  2:956316/140‑1 (MQ=25)                                          aCTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGAttt                                                                                                   >  1:455622/1‑141 (MQ=35)                                             cGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATg                                                                                                >  2:422485/1‑141 (MQ=33)                                             cGCATTGCCTGTACAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATg                                                                                                <  2:39280/141‑1 (MQ=17)                                               cATTGCCTGTAGAATTTCTTTTTTTTTTTTTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTc                                                                                              >  2:932310/1‑141 (MQ=11)                                               cATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTc                                                                                              >  1:278778/1‑141 (MQ=32)                                               cATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTc                                                                                              >  2:705884/1‑141 (MQ=32)                                                 ttGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTccc                                                                                            >  2:609561/1‑141 (MQ=32)                                                     cTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGcc                                                                                        <  1:41406/141‑1 (MQ=32)                                                       gTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTCTGTCCCAGCCTg                                                                                      >  1:49708/1‑141 (MQ=17)                                                       gTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTg                                                                                      >  2:868188/1‑141 (MQ=32)                                                         aGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGaa                                                                                    >  1:431572/1‑141 (MQ=34)                                                           aaTTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAga                                                                                  <  1:497016/141‑1 (MQ=35)                                                             tttCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAgatg                                                                                <  1:923445/141‑1 (MQ=38)                                                             tttCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTAGGTCCCAGCCTGAAgatg                                                                                <  2:165063/141‑1 (MQ=37)                                                              ttcgaaaagAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAgatga                                                                               >  1:4840/9‑141 (MQ=255)                                                                cgaaaagAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATATATGTCCCAGCCTGAAGATGAtt                                                                             >  2:805164/7‑141 (MQ=255)                                                                cTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGAtt                                                                             >  2:962417/1‑141 (MQ=40)                                                                 ttttCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGAttt                                                                            <  1:581036/141‑1 (MQ=40)                                                                 ttttCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGAttt                                                                            <  2:226450/141‑1 (MQ=40)                                                                 ttttCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGAttt                                                                            <  2:270134/141‑1 (MQ=40)                                                                 ttttCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAATCTCGATCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGAttt                                                                            <  1:687048/141‑1 (MQ=255)                                                                 ttttCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATGGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGAttt                                                                            >  1:517460/1‑141 (MQ=255)                                                                    tCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGAtttttt                                                                         >  2:542154/1‑141 (MQ=255)                                                                      gAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTa                                                                       >  2:203170/1‑141 (MQ=255)                                                                          ttCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGaa                                                                   >  1:461152/1‑141 (MQ=255)                                                                           tttttatgtTGGAGACCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTTCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAg                                                                  >  2:232934/7‑141 (MQ=17)                                                                           tctcTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAg                                                                  <  1:580068/141‑1 (MQ=255)                                                                           tctcTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAg                                                                  <  1:869901/141‑1 (MQ=255)                                                                           tctcTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAg                                                                  >  1:251510/1‑141 (MQ=255)                                                                             tctGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGta                                                                >  1:856861/1‑141 (MQ=255)                                                                              ctGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGtat                                                               >  1:940900/1‑141 (MQ=255)                                                                                gtgtTGGGGCCCCTGACTATAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACCGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTatat                                                             <  1:676059/141‑1 (MQ=255)                                                                                  gtTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTa                                                           <  2:377317/141‑1 (MQ=255)                                                                                   ttGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGGTTTTTTTAGGAAGTATATTAc                                                          >  2:695964/1‑141 (MQ=255)                                                                                   ttGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTAc                                                          >  2:644413/1‑141 (MQ=255)                                                                                     ggggCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAg                                                        <  1:422485/141‑1 (MQ=255)                                                                                      gggCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGt                                                       <  2:257540/141‑1 (MQ=255)                                                                                      gggCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGt                                                       <  2:514562/141‑1 (MQ=255)                                                                                      gggCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGt                                                       >  1:185787/1‑141 (MQ=255)                                                                                        ttcctttacttttaTTGGAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATAAAACATCGTAGAGCATAGAACTTTTAGTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGtac                                                     <  2:935933/128‑1 (MQ=18)                                                                                            cTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACg                                                 >  1:484610/1‑141 (MQ=255)                                                                                              gACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTa                                               >  1:97022/1‑141 (MQ=255)                                                                                                 tAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATAATTTTTTTAGGAAGTATATTACAGTACTACGTATTa                                            >  2:594476/1‑141 (MQ=255)                                                                                                   gAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGa                                          >  1:593133/1‑141 (MQ=255)                                                                                                       tGAAAAAAGCTTGTTTCAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAat                                      <  1:814164/141‑1 (MQ=255)                                                                                                       tGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAat                                      <  1:324323/141‑1 (MQ=255)                                                                                                       tGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAat                                      >  1:312077/1‑141 (MQ=255)                                                                                                          aaaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAatcat                                   >  1:456520/1‑141 (MQ=255)                                                                                                           aaaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAatcatc                                  <  2:639247/141‑1 (MQ=255)                                                                                                            aaaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCt                                 <  1:532680/141‑1 (MQ=255)                                                                                                             aaGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCtt                                <  2:816385/141‑1 (MQ=255)                                                                                                              aGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCttt                               >  2:454735/1‑141 (MQ=255)                                                                                                               gCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTg                              >  2:343220/1‑141 (MQ=255)                                                                                                                  tGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTTGTTTGTATTTTACAGTACTACGTATTAGAAAATCATCTTTGAAt                           >  2:860474/1‑141 (MQ=21)                                                                                                                  tGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAAt                           <  1:95533/141‑1 (MQ=255)                                                                                                                  tGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGACTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAACATCATCTTTGAAt                           >  1:859017/1‑141 (MQ=255)                                                                                                                    ttACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCa                         >  1:403552/1‑141 (MQ=255)                                                                                                                     tACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAg                        <  1:537666/141‑1 (MQ=255)                                                                                                                     tACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAg                        >  1:26994/1‑141 (MQ=255)                                                                                                                      aCAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCGTAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGc                       <  1:238301/141‑1 (MQ=255)                                                                                                                        aaGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGa                     >  1:404686/1‑141 (MQ=255)                                                                                                                         aGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGCAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAg                    <  1:962417/141‑1 (MQ=255)                                                                                                                         aGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCAGCTTTGAATCAGCGAg                    >  1:815877/1‑141 (MQ=255)                                                                                                                            gcATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTAt                 >  2:373571/1‑141 (MQ=255)                                                                                                                            gcATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTAt                 <  2:460574/141‑1 (MQ=255)                                                                                                                              aTTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGGATCAGCGAGTAttt               <  2:461152/141‑1 (MQ=255)                                                                                                                                 ttCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTaa            >  1:837344/1‑141 (MQ=255)                                                                                                                                   cGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTAAac          <  2:715921/141‑1 (MQ=255)                                                                                                                                     ttCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTAAacac        >  1:94553/1‑141 (MQ=255)                                                                                                                                       cAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTAAACACgt      <  1:956447/141‑1 (MQ=255)                                                                                                                                        aGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTAAACACgtg     >  2:694451/1‑141 (MQ=255)                                                                                                                                           cAACTACTGCCAATATAACATCGTAGAGCATAGAAAATTGATTTATGTCCCAGCATGAAGATGATTTTTTTAGAAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTAAACACGTGTTa  <  1:931515/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                            GCTGACTTTTCGTCATCTTCTGTGTTGGGACCCACACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGGGGCCCCTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACATCGTAGAGCATAGAACATTGATTTATGTCCCAGCCTGAAGATGATTTTTTTAGGAAGTATATTACAGTACTACGTATTAGAAAATCATCTTTGAATCAGCGAGTATTTTAAACACGTGTTA  >  CP000730/1469919‑1470197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.