| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1885475 = | 59 (0.900) | 3 (0.050) | 3/242 | NT | 5.2% | intergenic (‑257/+69) | fmtB1/USA300HOU_1748 | cell surface anchored protein/possible rhodanese domain sulfurtransferase |
| ? | CP000730 | 1885505 = | 54 (0.880) | intergenic (‑287/+39) | fmtB1/USA300HOU_1748 | cell surface anchored protein/possible rhodanese domain sulfurtransferase | |||||
AAATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1885622‑1885475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttggtgtCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTACAACTT > CP000730/1885505‑1885644 AAATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGC > 2:200725/1‑141 AATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCT < 2:245462/141‑1 ATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTT < 1:381665/141‑1 TGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTG < 1:69256/141‑1 GGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGG < 1:86423/141‑1 GGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCACGGTGCAATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGG < 1:206656/141‑1 gATTGATGCCGGAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGGTG < 1:957/140‑1 CATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGGTG < 1:117891/141‑1 CATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGGTG > 2:193785/1‑141 AATGTCGAAGGCGGCATGCACGCATGGGGTGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGCAACCGAAAC‑GTTACTTGGTGTCATTACAAATGT < 1:563280/141‑1 AATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATT < 2:69777/72‑1 AATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGGTGTCATTACAAATGTAATATTATT > 1:69777/1‑72 CTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCT > 1:713009/1‑141 CTTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCT < 2:180657/141‑1 TTGGTGTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACATTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTA < 2:663979/141‑1 GTCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTACAACT > 1:641430/1‑141 TCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTACAACTT < 2:609909/141‑1 AAATGGCATTGATGCCGTAAATGTCGAAGGCGGCATGCACGCATGGGGCGATGAAGGTTTGGAAATAAAAAGTATTTAAAGTAGTGACATAATTTAAAATAATATTACATTTGTAATGACACCAAGTAA‑CGTTTCGGTTGCTTGGTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1885622‑1885475‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttggtgtCATTACAAATGTAATATTATTTTAAATTATGTCACTACTTTAAATACTTTTTATTTCCAAACCTTCATCGCCCCATGCGTGCATGCCGCCTTCGACATTTACGGCATCAATGCCATTTGCCTCTAAATATTCTACAACTT > CP000730/1885505‑1885644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |