| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2021630 = | 70 (1.070) | 3 (0.050) | 3/232 | NT | 4.6% | intergenic (+189/+71) | yfkA/ykhA | possible dehydrogenase/acyl‑CoA hydrolase |
| ? | CP000730 | 2021695 = | 61 (1.040) | intergenic (+254/+6) | yfkA/ykhA | possible dehydrogenase/acyl‑CoA hydrolase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTTGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAATCTGTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2021782‑2021630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaatctgtctttATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTTCAACACGTTGTGGTGCTGTATCATAAAACCATTTTTCAACATCATCTTCTGGAT > CP000730/2021695‑2021831 TGTTGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTA > 1:412968/1‑141 TTGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACA > 1:732827/1‑141 TTGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACA > 2:764022/1‑141 TTGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACA > 1:72007/1‑141 TGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGTAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAA > 1:645805/1‑141 TGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATACTCCACCTACAA > 1:351386/1‑141 AACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAATC < 2:710968/141‑1 ACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAATCT < 1:665620/141‑1 CGAAGAAAATCACTTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAATCTG < 2:228607/141‑1 AAAAATATAAAGACAGATTGTTAAGGATGCATTGAACTGTTATGTTCGAATATTCCACCTACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGAC > 1:404977/1‑141 ATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTT > 2:299699/1‑141 GATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTT > 1:658498/1‑141 ACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTTCAACACGTTGTGGTGCTGTATCATAAAACCATTTTTCAACATCAT > 2:576950/1‑141 ACAATCTGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTTCAACACGTTGTGGTGCTGTATCATAAAACCATTTTTCAACATCAT < 1:190001/141‑1 TGTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTTCAACACGTTGTGGTGCTGTATCATAAAACCATTTTTCAACATCATCTTCTG > 2:673342/1‑141 GTCTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTTCAACACGTTGTGGTGCTGTATCATAAAACCATTTTTCAACATCATCTTCTGG > 1:109384/1‑141 CTTTATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTTCAACACGTTGTGGTGCTGTATCATAAAACCATTTTTCAACATCATCTTCTGGAT < 1:44583/141‑1 TGTTGAACGAAGAAAAGCACGTCGCATTGAAAGTAAACAAACAATTGAATATTTAGCTCAAGTGCAACATATTAGAGACTAAAAATATAAAGACAGATTGTTAAGGATGAATTGAACTGTTATGTTCGAATATTCCACCTACAATCTGTCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2021782‑2021630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaatctgtctttATATTTTTAGTCTCTAATATGTTGCACTTGAGCTAAATATTCAATTGTTTGTTTACTTTCAATGCGACGTGCTTTTCTTCGTTCAACACGTTGTGGTGCTGTATCATAAAACCATTTTTCAACATCATCTTCTGGAT > CP000730/2021695‑2021831 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |