| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2256396 = | 68 (1.040) | 4 (0.070) | 4/230 | NT | 6.1% | intergenic (+49/+72) | deoD2/dps | purine‑nucleoside phosphorylase/Dps family stress protein |
| ? | CP000730 | 2256443 = | 62 (1.070) | intergenic (+96/+25) | deoD2/dps | purine‑nucleoside phosphorylase/Dps family stress protein | |||||
GATGTATCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGTTGGCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2256548‑2256396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGTT > CP000730/2256443‑2256581 GATGTATCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAAT > 1:182603/1‑141 ATGTATCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATG > 1:359624/1‑141 TGTATCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGT < 2:239456/141‑1 TATCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGT < 2:167341/141‑1 TCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGTTG < 2:404587/141‑1 AGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGTTGGC < 1:715903/141‑1 GAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGTTGGCT < 2:516914/141‑1 GAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGTTGGCT < 1:299322/141‑1 CAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACAT‑TCTGGGCGTATCCCCATTTATGTGTTGGCTTTTATTTATATTATTACTTAT > 2:375136/1‑141 ATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATA > 2:159977/1‑141 TAAATGGGGATACGCCCA‑GAATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCA > 1:501253/1‑141 AATGGGGATACGCCCA‑GAATGTGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTAACGCAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCACTCCGACAAACATAGCTGCCGATACATCTTC > 2:622745/1‑141 TGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTC > 1:662632/1‑141 TGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTC > 1:223367/1‑141 TGTTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTC > 1:450367/1‑141 TTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGA < 1:251615/141‑1 TTGGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGA < 1:773778/141‑1 GGCTTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATT < 2:79820/141‑1 TTTTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCG < 2:613406/141‑1 TTATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGTT > 2:241615/1‑141 GATGTATCAGAAGATATGTTTATAGGTATGCAAACATCAGTAGATAAACATAATTGGATGTTTAAATCTTACTTAAGCTAATCTACAGATAAGTAATAATATAAATAAAAGCCAACACATAAATGGGGATACGCCCA‑GAATGTGTTGGCTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2256548‑2256396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgtgttggcttttATTTATATTATTACTTATCTGTAGATTAGCTTAAGTAAGATTTAAACATCCAATTATGTTTATCTACTGATGTTTGCATACCTATAAACATATCTTCTGATACATCATCGCCAGCATTACCAGCAATTTCGATTGCGTT > CP000730/2256443‑2256581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |