New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 800994	47 (0.720)	5 (0.080)	3/244	NT	9.5%	intergenic (+128/‑223)	hisC1/USA300HOU_0748	histidinol‑phosphate transaminase/hypothetical protein
	?	CP000730	= 801032	51 (0.830)					intergenic (+166/‑185)	hisC1/USA300HOU_0748	histidinol‑phosphate transaminase/hypothetical protein

TAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTGAGAGTATTCAGTGTAAAA  >  CP000730/800854‑801133                                                                                                                                              |                                                                                                                                            tAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACT                                                                                                                                             <  2:450857‑M1/141‑1 (MQ=255)   aaTACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAg                                                                                                                                           >  2:212781/1‑141 (MQ=255)     tACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATGTCTCTTTGTTAGGGCCCCGCCGGCA‑AGGTTGACTAGaa                                                                                                                                         >  2:74018/1‑141 (MQ=255)        gAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTTTTGGGGCCCCGCCGGCC‑AGGTTGACTAGAATTg                                                                                                                                      >  1:205239/1‑141 (MQ=255)         aaTAGTAAGTGGGGAGTGGGACAGAAATGATACTGTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGa                                                                                                                                     <  1:727009/141‑1 (MQ=255)          aTAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGaa                                                                                                                                    <  1:214975/141‑1 (MQ=255)            aGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGaaaa                                                                                                                                  >  2:492084/1‑141 (MQ=255)                aGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGc                                                                                                                              <  2:337786/141‑1 (MQ=255)                       aGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTAc                                                                                                                       <  2:644186/141‑1 (MQ=38)                         tGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACaa                                                                                                                     >  1:501774/1‑141 (MQ=39)                            gACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcg                                                                                                                  <  1:119784/141‑1 (MQ=38)                            gACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAgcg                                                                                                                  <  1:418877/141‑1 (MQ=39)                              cAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTgaacgaaaatgcgcttgtaacaagctttt                                                                                                                <  1:61913‑M1/141‑30 (MQ=255)                              cAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCa                                                                                                                <  1:246242/141‑1 (MQ=39)                               aGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCAt                                                                                                               <  1:739395/141‑1 (MQ=255)                               aGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCACAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGAAAAAAAAAAAAAAAAGCTTGTTACAAGCGCAt                                                                                                               <  2:226607/141‑1 (MQ=14)                                 aaaTGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTTAAAAAAGCTTGTTACAAGCGCAttt                                                                                                             <  1:455875/141‑1 (MQ=255)                                    tGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCg                                                                                                          >  2:375478/1‑141 (MQ=255)                                     gATACTTTCGCAAAATTTATTTCTTTGTCGCGACCCAACTTGCATTGTCTGTAGAAATTGGGAATCTAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTgaacgaaaatgcgcttgtaacaagcttttttcaatt                                                                                                         <  1:424503‑M1/141‑37 (MQ=255)                                      atattatcgtaaaatttatttcgtCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTgaacgaaaattcgcttgtaacaagcttttttcaattc                                                                                                        <  1:318252‑M1/131‑38 (MQ=255)                                      aTACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCCTTTTCGtt                                                                                                        >  2:745603/1‑141 (MQ=255)                                         cTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCag                                                                                                     >  1:473946‑M2/1‑139 (MQ=255)                                          tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTgaacgaaaatgcgcttgtaacaagcttttttcaattctagt                                                                                                    <  1:222359‑M1/141‑42 (MQ=255)                                          tttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCagt                                                                                                    >  1:644322‑M2/1‑138 (MQ=255)                                           ttCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCagtc                                                                                                   >  1:642690‑M2/1‑137 (MQ=255)                                              gtaaaattTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCAGTAGTTGACTgaacgaaaattcgcttgtaacaagcttttttcaattctagtcaa                                                                                                 <  1:49258‑M1/139‑45 (MQ=255)                                              gCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCagtcaac                                                                                                >  2:54265‑M2/1‑134 (MQ=255)                                              gCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCagtcaac                                                                                                >  1:555390‑M2/1‑134 (MQ=255)                                                   atttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                           <  1:642063/141‑1 (MQ=32)                                                   atttatttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTg                                                                                           >  1:348808/1‑141 (MQ=32)                                                         ttCGTCGTCCCACCCCAACTTGCCTTGTGTTTAGGCTGGTGGGATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAata                                                                                     >  2:626074/1‑141 (MQ=11)                                                         ttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGGAGTTGGGGATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACGAGCGCA‑TTTCGTTCAGTCAACTACTGCCAatat                                                                                    <  2:683593/141‑1 (MQ=11)                                                         ttCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCCATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTAAAAAAAAATAAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAata                                                                                     <  2:440543/141‑1 (MQ=11)                                                          tcgtcgTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                    >  1:621621/1‑141 (MQ=35)                                                          tcgtcgTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                    >  2:397779/1‑141 (MQ=35)                                                                 cccACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTg                                                                             >  1:728417/1‑141 (MQ=35)                                                                  ccACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGt                                                                            <  1:43572/141‑1 (MQ=35)                                                                       ccAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGc                                                                       <  1:212781/141‑1 (MQ=35)                                                                          aCTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCAtt                                                                    <  1:149626/141‑1 (MQ=37)                                                                            ttGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGa                                                                  >  1:358623/1‑141 (MQ=38)                                                                               cATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACa                                                               >  1:458690/1‑141 (MQ=38)                                                                                 ttGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACAtt                                                             >  1:503029/1‑141 (MQ=39)                                                                                             aTTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGtctc                                                 <  1:228919/141‑1 (MQ=39)                                                                                                gggAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAg                                              >  2:419654/1‑141 (MQ=40)                                                                                                ggattcccAATTTCTCTTTGTTGGGGCCCCGCCGACA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGACAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAg                                              >  1:188995/7‑141 (MQ=255)                                                                                                 ggAATCCACTTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGc                                             >  2:404380/1‑141 (MQ=255)                                                                                                 ggAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGc                                             >  1:450831/1‑141 (MQ=255)                                                                                                 ggAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGc                                             >  2:571046/1‑141 (MQ=40)                                                                                                    aTCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCa                                          >  1:485197/1‑141 (MQ=40)                                                                                                    aTCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTGGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCa                                          >  1:567368/1‑141 (MQ=255)                                                                                                        aaTTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGc                                      <  1:381814/141‑1 (MQ=255)                                                                                                             ctctTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTAAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAgtgt                                 <  1:75257/141‑1 (MQ=255)                                                                                                              tctTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGtgtg                                <  2:437131/141‑1 (MQ=255)                                                                                                                  tgttgGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAatg                            <  1:457445/141‑1 (MQ=255)                                                                                                                         gCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAggg                     >  1:737764/1‑140 (MQ=255)                                                                                                                           cccGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTga                   <  2:701182/141‑1 (MQ=255)                                                                                                                            ccgccgGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGAGTGAATGATAAGGTgag                  >  1:773710/1‑141 (MQ=255)                                                                                                                             cgccgGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTgaga                 <  1:81597/141‑1 (MQ=255)                                                                                                                             cgccgGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTgaga                 >  2:462466/1‑141 (MQ=255)                                                                                                                                       ggTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTGAGAGTATTCAgt        >  1:447088/1‑141 (MQ=255)                                                                                                                                        gTTGACTgaacgaaaatgcgcttgtaacaagcttttttcaattctagtcaaccttgccggcggggccccaacaaagagaaattggattcccaatttctacagacaatgcaagttggggtgggacgacgaaataaattttgc       >  1:555390‑M1/1‑7 (MQ=255)                                                                                                                                        gTTGACTgaacgaaaatgcgcttgtaacaagcttttttcaattctagtcaaccttgccggcggggccccaacaaagagaaattggattcccaatttctacagacaatgcaagttggggtgggacgacgaaataaattttgc       >  2:54265‑M1/1‑7 (MQ=255)                                                                                                                                         ttGACTAGAATTGAAAAAAGCTTGTTACAAGCGAATTTTCGTTCagtcaactactgccggcggggccccaacaaagagaaattggattcccaatttctacagacaatgcaagttggggtgggacgacgaaataaattttac      <  1:49258‑M2/141‑98 (MQ=255)                                                                                                                                          tGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTgagaaaaaaaaaaata     <  2:693118/141‑13 (MQ=255)                                                                                                                                           gACTgaacgaaaatgcgcttgtaacaagcttttttcaattctagtcaaccttgccggcggggccccaacaaagagaaattggattcccaatttctacagacaatgcaagttggggtgggacgacgaaataaattttgcgaa    >  1:642690‑M1/1‑4 (MQ=255)                                                                                                                                            aCTgaacgaaaatgcgcttgtaacaagcttttttcaattctagtcaaccttgccggcggggccccaacaaagagaaattggattcccaatttctacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaa   >  1:644322‑M1/1‑3 (MQ=255)                                                                                                                                            aCTAGAATTGAAAACAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTGAGATTATTCAGTGTaaa   <  1:341437/141‑1 (MQ=255)                                                                                                                                            aCTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCagtcaaccttgccggcggggccccaacaaagagaaattggattcccaatttctacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaa   <  1:222359‑M2/141‑101 (MQ=255)                                                                                                                                             cTgaacgaaaatgcgcttgtaacaagcttttttcaattctagtcaaccttgccggcggggccccaacaaagagaaattggattcccaatttctacagacaatgcaagttggggtgggacgacgaaataaattttgcgaaag  >  1:473946‑M1/1‑2 (MQ=255)                                                                                                                                              |                                                                                                                                            TAAATACGAATAGTAAGTGGGGAGTGGGACAGAAATGATACTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCCGCCGGCA‑AGGTTGACTAGAATTGAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTGAACATTGATTTATGTCTCAAGCTCAATGCAGTGTGAATGATGAGGTGAGAGTATTCAGTGTAAAA  >  CP000730/800854‑801133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.