Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 2,046,844 C→T 12.8% intergenic (+52/+37) putP → / ← camS SSS family solute:sodium (Na+)/proline symporter/pheromone lipoprotein CamS

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,046,8440CT12.8% 191.0 / 16.8 70intergenic (+52/+37)putP/camSSSS family solute:sodium (Na+)/proline symporter/pheromone lipoprotein CamS
Reads supporting (aligned to +/- strand):  ref base C (30/31);  new base T (3/6);  total (33/37)
Fisher's exact test for biased strand distribution p-value = 4.85e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.88e-01

CATATGTTGTAAGTAAACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAATTTCATAGTTATCGA  >  CP000730/2046704‑2046984
                                                                                                                                            |                                                                                                                                            
cATATGTTGTAAGTAAACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGAc                                                                                                                                              >  2:42304/1‑141 (MQ=255)
  tatGTTGTAAGTAAACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTa                                                                                                                                            >  2:131742/1‑141 (MQ=255)
   atGTTGTAAGTAAACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACCAATGTTAGTCATAATTTTGATTaa                                                                                                                                           <  1:17917/141‑1 (MQ=38)
      ttgtAAGTAAACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACAt                                                                                                                                        >  2:30401/1‑141 (MQ=255)
       tgtAAGTAAACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACCAATGTTAGTCATAATTTTGATTAACAtt                                                                                                                                       <  1:597198/141‑1 (MQ=38)
        gtaagtaaACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACCAATGTTAGTCATAATTTTGATTAACAtta                                                                                                                                      <  1:771029/141‑2 (MQ=38)
          aagtttaCTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGt                                                                                                                                    >  2:437287/7‑141 (MQ=255)
              aaaCTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACCAATGTTAGTCATAATTTTGATTAACATTAGTACCt                                                                                                                                <  1:556427/141‑1 (MQ=37)
                  ttACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACCAATGTTAGTCATAATTTTGATTAACATTAGTACCttttt                                                                                                                            <  1:484109/141‑1 (MQ=37)
                    aCTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTttat                                                                                                                          <  1:28568/141‑1 (MQ=255)
                     cTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTttatt                                                                                                                         >  2:67217/1‑141 (MQ=255)
                       aaaaaaCCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTtattat                                                                                                                       <  1:571625/141‑1 (MQ=255)
                        aaaaaCCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATc                                                                                                                      <  1:258157/141‑1 (MQ=255)
                               tGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAAtt                                                                                                               >  2:86394/1‑141 (MQ=255)
                               tGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAAtt                                                                                                               >  2:605206/1‑141 (MQ=255)
                                 gTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTAGGATCTTTAATTTa                                                                                                             >  1:42905/1‑141 (MQ=255)
                                        tgttgAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACaattaa                                                                                                      >  2:775180/1‑141 (MQ=255)
                                            gAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTAc                                                                                                  >  1:660944/1‑141 (MQ=255)
                                            gAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTAc                                                                                                  <  2:219686/141‑1 (MQ=255)
                                            gAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTAc                                                                                                  <  1:496262/141‑1 (MQ=255)
                                              aaCTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTg                                                                                                >  2:249736/1‑141 (MQ=255)
                                              aaCTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTACTATCTTTAATTTACAATTAATTACTg                                                                                                >  2:623440/1‑141 (MQ=255)
                                                  gACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTaaa                                                                                            >  2:362953/1‑141 (MQ=255)
                                                   aCTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAat                                                                                           <  1:420946/141‑1 (MQ=255)
                                                    cTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAata                                                                                          <  1:267820/141‑1 (MQ=255)
                                                     ttAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAatat                                                                                         >  2:653422/1‑141 (MQ=255)
                                                      tAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATg                                                                                        <  1:703393/141‑1 (MQ=255)
                                                        aaCAAAGTTCGTGACCTCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGaa                                                                                      >  2:52770/1‑141 (MQ=255)
                                                        aaCAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTGACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGaa                                                                                      <  2:44239/141‑1 (MQ=255)
                                                         aCAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAAc                                                                                     >  2:473388/1‑141 (MQ=255)
                                                           aaaGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAACATTATGACTAACATTGGTACCTTTCTATTATATTTAATTTACAATTAATTACTGTAAATATGAACtt                                                                                   <  1:674895/141‑1 (MQ=255)
                                                           aaaGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACtt                                                                                   >  2:576493/1‑141 (MQ=255)
                                                            aaGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAGCTTg                                                                                  >  2:48780/1‑141 (MQ=255)
                                                            aaGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTg                                                                                  <  1:275734/141‑1 (MQ=255)
                                                             aGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGc                                                                                 >  1:628718/1‑141 (MQ=255)
                                                              gTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCg                                                                                >  2:478261/1‑141 (MQ=255)
                                                                            tAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCt                                                                  <  1:436377/141‑1 (MQ=255)
                                                                            tAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCt                                                                  >  2:534979/1‑141 (MQ=255)
                                                                             agagAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCtt                                                                 <  1:722762/141‑1 (MQ=255)
                                                                             agagAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCtt                                                                 <  1:669396/141‑1 (MQ=255)
                                                                              gagaAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCttt                                                                <  1:224654/141‑1 (MQ=255)
                                                                              gagaAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCttt                                                                >  1:468646/1‑141 (MQ=255)
                                                                                    aataatTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCtt                                                          <  1:680676/141‑1 (MQ=255)
                                                                                     ataatTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTa                                                         <  2:193218/141‑1 (MQ=255)
                                                                                       aatTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACt                                                       <  1:254586/141‑1 (MQ=255)
                                                                                               aGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTGAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAg                                               <  2:385047/141‑1 (MQ=255)
                                                                                                gTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTATATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGc                                              <  2:314832/141‑1 (MQ=255)
                                                                                                gTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGc                                              <  1:554888/141‑1 (MQ=255)
                                                                                                  cTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCAc                                            <  1:110069/141‑1 (MQ=255)
                                                                                                    aaagataatAAAAAGGTACCAATGTTAGTCATAATTTTGATTAACATTAGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGt                                          >  2:436977/9‑141 (MQ=21)
                                                                                                    aaagataatAAAAAGGTACCAATGTTAGTCATAATTTTGATTAACATTAGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGt                                          >  2:245845/9‑141 (MQ=21)
                                                                                                     aaCAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGtg                                         >  2:511839/1‑141 (MQ=255)
                                                                                                          aTTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGtggttgg                                    <  1:493295/141‑1 (MQ=255)
                                                                                                           ttAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGtggttggt                                   <  2:687311/141‑1 (MQ=255)
                                                                                                             aaaaaGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTa                                 >  1:435325/1‑141 (MQ=255)
                                                                                                             aaaaaGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTa                                 <  2:513367/141‑1 (MQ=255)
                                                                                                               aaaGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTAcc                               >  1:268935/1‑141 (MQ=255)
                                                                                                                aaGGTACTAATGTTAATCAAGATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCa                              <  2:244403/141‑1 (MQ=255)
                                                                                                                     aCTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCttt                         >  1:106800/1‑141 (MQ=255)
                                                                                                                     aCTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCttt                         >  1:369377/1‑141 (MQ=255)
                                                                                                                     aCTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCttt                         >  1:751390/1‑141 (MQ=255)
                                                                                                                         aTGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTGATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATa                     >  2:94936/1‑141 (MQ=255)
                                                                                                                         aTGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATa                     <  1:249736/141‑1 (MQ=255)
                                                                                                                          tGTTAGTCATAATTTTGATTAACATTAGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATAc                    >  1:440335/1‑141 (MQ=38)
                                                                                                                          tGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATAc                    <  2:436926/141‑1 (MQ=255)
                                                                                                                              aaTCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAAt                >  1:389285/1‑141 (MQ=255)
                                                                                                                               gtCATAATTTTGATTAACATTAGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAAtt               <  2:684943/140‑1 (MQ=255)
                                                                                                                                     aTTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAATTTCATAg         <  2:314544/141‑1 (MQ=255)
                                                                                                                                        aTGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAATTTCATAGTTa      <  1:180260/141‑1 (MQ=255)
                                                                                                                                         tGACTAANATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACAAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAATTTCATAGTTAt     <  2:589617/141‑1 (MQ=255)
                                                                                                                                         tGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTCATTAAAGCACGTGGTTGGGTACCATCTGTAATACGAATTTCATAGtaac     >  2:585920/1‑138 (MQ=255)
                                                                                                                                           acttacttTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAATTTCATAGTTATc  >  2:396934/1‑140 (MQ=255)
                                                                                                                                            cTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAATTTCATAGTTATCGa  <  1:495968/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
CATATGTTGTAAGTAAACTTACTAAAAAACCTGGTGCATTTGTTGAAACTGACTTAAACAAAGTTCGTGACATCGTTAGAGAAAAATAATTCATAAGTCTTAACAAATTAAAAAGGTACTAATGTTAATCAAAATTATGACTAACATTGGTACCTTTTTATTATCTTTAATTTACAATTAATTACTGTAAATATGAACTTGCGGTTCTTTGTCATCTTTTGTCTTACTAATTAAAGCACGTGGTTGGTTACCATCTTTAATACGAATTTCATAGTTATCGA  >  CP000730/2046704‑2046984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: