| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 284,238 | G→T | 6.1% | H463N (CAT→AAT) | ptsG ← | PTS family glucose/glucoside (glc) porter component IIABC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 284,238 | 0 | G | T | 6.1% | 249.3 / 3.2 | 75 | H463N (CAT→AAT) | ptsG | PTS family glucose/glucoside (glc) porter component IIABC |
| Reads supporting (aligned to +/- strand): ref base G (42/28); new base T (2/3); total (44/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCCCCGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGACCAGGTGTT > CP000730/284098‑284377 | aTCCCCGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTtgatg < 2:753101/141‑1 (MQ=255) tCCCCGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTtgatga < 2:460664/141‑1 (MQ=255) ccccGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGaa < 1:51237/141‑1 (MQ=255) cccGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAg > 1:389856/1‑141 (MQ=255) cccGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAg > 1:9768/1‑141 (MQ=255) cGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAgtg < 2:106734/141‑1 (MQ=255) cGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAgtg < 2:758487/141‑1 (MQ=255) gAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAgtgt > 1:47230/1‑141 (MQ=255) gAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAgtgt > 2:369834/1‑141 (MQ=255) ggCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGtgtg < 2:705557/140‑1 (MQ=255) aGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGtgtg < 1:783992/141‑1 (MQ=255) tcAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGt < 1:493064/141‑1 (MQ=255) cAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAACTTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATTAAGTGTGACGCGTAGtc < 2:490423/141‑1 (MQ=255) cATTTTTGATAACTGTAACGTGAGGCCCATAAATTGCTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTg > 2:396563/1‑141 (MQ=255) aTTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGGTTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGAGGAAGGGTGGCGCGTAGTCTCGTTgg > 2:665355/1‑140 (MQ=255) aTTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTCTGGCACCAGTACTTTCGAGCACTACTTTACAGACTCTGTCACTTTGATGAAGTGTGACGCGTAGTCTCGTTGc > 1:270589/1‑141 (MQ=255) tttGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGcaca > 1:723922/1‑141 (MQ=255) tGATACCTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTNGCacaac > 2:590722/1‑141 (MQ=255) tGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTgactgtt < 1:342811/141‑7 (MQ=255) tttttttaCGTGAGGCCCATAAATTACTTGCACACCAGTGCGTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCATAACAGTc > 2:514113/8‑141 (MQ=255) cTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATTCTTTAGCGACGTTGGCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCag > 1:276306/1‑140 (MQ=255) gTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACg < 1:496315/141‑1 (MQ=255) tAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGa > 2:382330/1‑141 (MQ=255) aCGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGAtt > 2:146847/1‑141 (MQ=255) aGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAAt > 2:558461/1‑141 (MQ=255) aGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCGCGTTGCACAACAGTCAACGATTTCAAt < 1:340813/141‑1 (MQ=255) ggCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGGCAACGAGTTCAATg > 2:498414/1‑141 (MQ=255) gCCCATAACTTACTTGCCCACCGGTGCCTTGCTGGTTTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTCGTCTCGTTGCACAACCGTCAACGATTTCAATGt < 2:276306/141‑1 (MQ=255) gCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGt < 1:376897/141‑1 (MQ=255) cATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTAt > 1:602355/1‑141 (MQ=255) aTAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATc < 2:156298/141‑1 (MQ=255) tAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATTAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCt > 1:352191/1‑141 (MQ=255) tAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATTAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCt > 1:352202/1‑141 (MQ=255) ttACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGc > 1:253015/1‑141 (MQ=255) ttACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGc < 1:669330/141‑1 (MQ=255) tACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGcc < 1:646081/141‑1 (MQ=255) aCTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCt > 2:605854/1‑141 (MQ=255) aCTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCt > 1:683336/1‑141 (MQ=255) cTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTc > 1:173322/1‑141 (MQ=255) ttGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTcc > 1:160846/1‑141 (MQ=255) aGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGc > 1:303815/1‑141 (MQ=255) aGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGc > 2:342419/1‑141 (MQ=255) tGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGcaa > 2:100855/1‑141 (MQ=255) tGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGcaa > 1:692943/1‑141 (MQ=255) gCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGcaac > 1:176705/1‑141 (MQ=255) ccTTGCTGGATTACACCTTTGGCACCAGTACTTTTGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGcaaca > 1:269063/1‑141 (MQ=255) acacCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGct < 2:510656/141‑1 (MQ=255) acCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGctct < 2:775351/141‑1 (MQ=255) cTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCGCCCAAACCAGCAACAATAGTTTGTGCTCttt > 2:75974/1‑141 (MQ=255) tttGGCACCAGTACTTTCGAGTAATACTTTATCGTCTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACATCAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTc < 2:599880/141‑1 (MQ=255) tttGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCTTCCCAAACCAGCAACAATAGTTTGTGCTCTTTc > 2:223446/1‑141 (MQ=255) tttGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTc > 1:716047/1‑141 (MQ=255) gCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCAAAAACCAGCAACAATAGTTTGTGCTCTTTCAGTa > 1:629204/1‑141 (MQ=255) cACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAg > 1:173889/1‑141 (MQ=255) aCCAGTACGTTCGCGTAATACTTGATCGACTTGGTCATTTTGCTGGAGTGTGACGCGTAGTCTCGTTGCACACCAGTCAACGATTTCCATGTTATCTTTGCCTCCCAAACCTGCAACAATAGTTTGTGCTCTTTCAGTAGc < 1:652805/141‑1 (MQ=255) cAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGtt > 1:513598/1‑91 (MQ=255) cAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGtt < 2:513598/91‑1 (MQ=255) cAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCt < 2:315875/141‑1 (MQ=255) aGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTc < 1:332152/141‑1 (MQ=255) cTTTCGAGTAATACTTTATCGACTTTGTCATTTTGCTGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCCATGTTATCTTTGCCCCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACt > 2:290582/1‑141 (MQ=255) ttCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACttg < 1:782372/141‑1 (MQ=255) cGAGTAATACTGTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACttgtt > 2:273285/1‑141 (MQ=255) gAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACttgttg < 1:472554/141‑1 (MQ=255) tAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGtgc < 2:500486/141‑1 (MQ=255) aTACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCACCTTGTTGtgctg > 1:418610/1‑141 (MQ=255) aTACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGtgctg > 1:418550/1‑141 (MQ=255) aTACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGATTGTGCTCTTTCAGTAGCCTCAACTTGTTGtgctg > 1:444679/1‑141 (MQ=255) tACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGtgctgc < 2:160846/141‑1 (MQ=255) tACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGtgctgc < 1:657485/141‑1 (MQ=255) aTCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCttt > 1:17065/1‑141 (MQ=255) cTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTAtctt > 2:58094/1‑141 (MQ=255) cTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTAtctt < 1:763552/141‑1 (MQ=255) tttGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTAtcttc > 2:212109/1‑141 (MQ=255) cATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGAc > 2:298783/1‑141 (MQ=255) aTTTTGATTAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGAcc < 2:352191/141‑1 (MQ=255) aTTTTGATTAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGAcc < 2:352202/141‑1 (MQ=255) ttGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGACCAgg < 2:330342/141‑1 (MQ=255) tgaAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGACCAGGTGtt > 2:420652/1‑141 (MQ=255) tgaAGTGTGACGCGTAGTCTCGTTGCACAACAGACAACGGTTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGACCAGGTGtt > 2:165121/1‑141 (MQ=255) | ATCCCCGAGCAATTCTTCAATTTCATTTTTGATAACTGTAACGTGAGGCCCATAAATTACTTGCACACCAGTGCCTTGCTGGATTACACCTTTGGCACCAGTACTTTCGAGTAATACTTTATCGACTTTGTCATTTTGATGAAGTGTGACGCGTAGTCTCGTTGCACAACAGTCAACGATTTCAATGTTATCTTTGCCTCCCAAACCAGCAACAATAGTTTGTGCTCTTTCAGTAGCCTCAACTTGTTGTGCTGCAGCTTTATCTTCTCGACCAGGTGTT > CP000730/284098‑284377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |