| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 330,730 | T→C | 5.2% | intergenic (+21/‑63) | esxA → / → esaA | ESAT‑6 family virulence protein/virulence protein EsaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 330,730 | 0 | T | C | 5.2% | 223.9 / 3.0 | 78 | intergenic (+21/‑63) | esxA/esaA | ESAT‑6 family virulence protein/virulence protein EsaA |
| Reads supporting (aligned to +/- strand): ref base T (46/27); new base C (2/2); total (48/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.31e-01 | |||||||||||
CTAAAGTAGAAAAATTTGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGATATTTTTT > CP000730/330594‑330870 | cTAAAGTAGAAAAATTTGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTcaca > 2:355110/1‑141 (MQ=255) tAGAAAAATTTGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGCCACAttagaa < 2:370697/141‑5 (MQ=255) aaaaTTTGCACAATTATTAGAAGAAATTCAACAACAAATGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAAtg > 1:417367/1‑141 (MQ=255) aaaaTTTGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAAtg > 1:325556/1‑141 (MQ=255) aaaaTTTGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGCCACAttagaaaatg < 1:509593/141‑9 (MQ=255) aaTTTGCACAATTATAAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAAtgtg < 1:538171/141‑1 (MQ=255) ttGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACCACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCt < 1:254626/141‑1 (MQ=255) ttGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCt > 1:765926/1‑141 (MQ=255) tacaATTATTAGAAGAANTTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTg > 1:492290/2‑141 (MQ=255) cacaATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTg < 2:779012/141‑1 (MQ=255) cacaATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTg > 1:448774/1‑141 (MQ=255) caATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCt > 2:597260/1‑141 (MQ=255) caATTATNAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGGAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCt < 2:589764/141‑1 (MQ=255) tattaGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATc < 1:101253/141‑1 (MQ=255) taGAAGAAATTAAACAACAATTGAATAGCACTGCTGAAGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCAtt > 1:567016/1‑141 (MQ=255) agaagaAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCAttt < 1:778239/141‑1 (MQ=255) aagaaATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCAttttt > 1:105606/1‑141 (MQ=255) aagaaATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCAttttt > 1:473915/1‑141 (MQ=255) agaaATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCAtttttt < 1:429936/141‑1 (MQ=255) aaaTTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTa < 1:99867/141‑1 (MQ=255) aTTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAg > 1:84518/1‑141 (MQ=255) aaaCAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGaaa > 1:212512/1‑141 (MQ=255) aacaacAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGaaaa > 1:393241/1‑141 (MQ=255) aacaacAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGaaaa > 1:494235/1‑141 (MQ=255) acaacaATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAaac < 2:494235/141‑1 (MQ=255) caaTTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTGATCATTTTTTTAAGAAAACAACt > 2:118213/1‑141 (MQ=255) aaTTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTg < 1:741918/141‑1 (MQ=255) ttGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGaa > 1:758284/1‑141 (MQ=255) tGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGaaa > 2:256335/1‑141 (MQ=255) gAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAg < 1:585104/141‑1 (MQ=255) gAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGACACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAg < 2:260422/141‑1 (MQ=255) aTAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGa > 2:82823/1‑141 (MQ=255) aGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGaaa > 2:571074/1‑141 (MQ=255) cACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATa > 2:55565/1‑141 (MQ=255) tgctgATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGc > 1:87396/1‑141 (MQ=255) tgctgATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGc > 2:597480/1‑141 (MQ=255) tgctgATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGc > 2:763291/1‑141 (MQ=255) ccGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGAAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAATAAAACAACTGAAAGGAAATAAGCATgaaaaa > 2:687851/1‑141 (MQ=255) ttCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATgaaaaagaa > 2:395750/1‑141 (MQ=255) tCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATgaaaaagaaa > 2:666992/1‑141 (MQ=255) cAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAAAAACTGAAAGGAAATAAGCATgaaaaagaaaa > 1:234342/1‑141 (MQ=255) aGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGAAAAAAAAAAAAAAAt < 2:10661/141‑1 (MQ=255) gAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAAtt > 2:721280/1‑141 (MQ=255) aaCAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTg > 1:175739/1‑141 (MQ=255) cAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGa > 1:758324/1‑141 (MQ=255) aaGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGAt > 2:378718/1‑141 (MQ=255) gACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGAttt > 2:455737/1‑141 (MQ=255) aCCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTa > 1:59233/1‑141 (MQ=255) aCCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTa > 2:524997/1‑141 (MQ=255) ccAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTAt < 1:607172/141‑1 (MQ=255) aacaacTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGc > 1:216644/1‑141 (MQ=255) caacTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCAt < 1:230476/141‑1 (MQ=255) caacTTTATAATAATAACGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGATTATCATTTTTTTAAGAAAACAGCTGAATGGAAATAAGAAAAAAAAAAAAAAATTGGATTTATGCAt < 2:20481/141‑1 (MQ=255) cTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTaa > 1:358327/1‑141 (MQ=255) cTTTCTAATAATGTCGGTTTTTAATAAGGAGTCTGAAAGTGGGATAGTGACTGTGTCTAATGTGGCTGTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTaa < 1:662097/141‑1 (MQ=255) taataaTTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGAAAAAAAAAAAAAAATTGGATTTATGCATTAATTGTc < 2:124620/141‑1 (MQ=255) aataatTTCGGTTTGCAAAAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAAGTGTCa < 2:676212/141‑1 (MQ=255) taatTTCGGTTTGAAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAAAAAAATTGGATTTATGCATTAATTGTCACt < 2:693937/141‑1 (MQ=255) gTTTGTAATAAGCATTCTGAAATTGGAAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGTTTTATGCATTAATTGTCACTTTAattat < 2:375381/141‑1 (MQ=255) gTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAattat > 1:535523/1‑141 (MQ=255) gTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAattat < 2:393241/141‑1 (MQ=255) tttGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAattatt < 1:140427/141‑1 (MQ=255) gCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATtata > 2:701444/1‑141 (MQ=255) tAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTg < 1:414358/141‑1 (MQ=255) aaGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTTATTTTACTACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGc > 2:554621/1‑141 (MQ=255) cATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCAAAAAAAAAAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCAt < 2:87396/141‑1 (MQ=255) ttCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCAtag > 2:571989/1‑141 (MQ=255) cTGAAATTGGCAAAGTCAAATTTTCTAATGTGGCTTTGCTTATCATTTTTTTACGAACACAACTGAAAGGAAATAAGCAAGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCAtagtt > 2:180309/1‑141 (MQ=255) tGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCAtagtta > 2:456113/1‑141 (MQ=255) ataagCAAAGCCACATTAGAAAATGTGACTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCAGAGTTAGTAt > 1:517451/5‑141 (MQ=38) aTTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTAt < 2:280146/141‑1 (MQ=255) tGGCAAAGTAAAATTTTATAATGTGGCTTTGCTTATCATTTTTTTAATAAAACAATTTAAATGAAATAAGCATAAAAAAGAAAAATTGGAGTTATGCATTAATTATGACTGTAATTATAAAAATTGCCATGGTTAGTATGa > 2:90932/1‑141 (MQ=255) gCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATAAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGata < 2:373454/141‑1 (MQ=255) cAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAGACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATATTTAGTATGatat > 2:423526/1‑141 (MQ=255) cAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGatat > 1:40695/1‑141 (MQ=255) cAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGatat < 2:175739/141‑1 (MQ=255) cAAAGCCACATTAGAAAATGTGACTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGctat > 2:761993/1‑141 (MQ=255) aGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGATAtttt > 1:596432/1‑141 (MQ=255) tCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGATAtttttt < 1:529171/141‑1 (MQ=255) | CTAAAGTAGAAAAATTTGCACAATTATTAGAAGAAATTAAACAACAATTGAATAGCACTGCTGATGCCGTTCAAGAACAAGACCAACAACTTTCTAATAATTTCGGTTTGCAATAAGCATTCTGAAATTGGCAAAGTCACATTTTCTAATGTGGCTTTGCTTATCATTTTTTTAAGAAAACAACTGAAAGGAAATAAGCATGAAAAAGAAAAATTGGATTTATGCATTAATTGTCACTTTAATTATTATAATTGCCATAGTTAGTATGATATTTTTT > CP000730/330594‑330870 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |