| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,380 | 1 | . | C | 98.2% | 178.2 / ‑4.1 | 55 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (24/30); total (24/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| * | NC_000913 | 4,296,380 | 2 | . | G | 98.2% | 179.9 / ‑3.9 | 55 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (24/30); total (24/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
GTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑CCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGTTGG > NC_000913/4296126‑4296668 || gtaatattGTAGGTGGGTTAATGAGTTTATGCCGAAGCCGACATCAACGCCGGAGGAGACGCTTAACGCGTCTTATCAGGCCTAGGCCAGACAGCGCAATAGCCTGATTGAGCGTGATTTTGTAGGTAGGATAGGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTGATCCGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAACGCCTGATGCGACGCTTGCCGCGTCtt < 1:436181/294‑1 (MQ=11) ccggtgacgcccaaTCCGGCATCAACGCCTTATGCTATGCTTGCCGCGTCTTATCAGGCCTTCGCTCGTAAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTgg < 1:23566/288‑1 (MQ=11) cgCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAAttt > 2:444667/2‑301 (MQ=255) cgtcATCCGGCATCAACGCCTGATGCGACGCTTGCCGAGTCTTAGCAGGCCTACGACAGACAGCGCGATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAAttttt < 1:180877/298‑1 (MQ=11) cATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTc < 2:576360/301‑1 (MQ=255) cATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTc < 2:467233/301‑1 (MQ=255) aaCGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCacac < 2:505753/301‑1 (MQ=255) gATGCGACGCTTGCCGCATCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTa < 2:214422/300‑1 (MQ=255) tgACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCaaa < 1:378876/300‑1 (MQ=255) gACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCaaaa > 2:378881/1‑300 (MQ=255) cgTATTATCAGGCATACGCCAGACAGCGCAATAGCCTGATTTAGCTTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 1:36634/300‑1 (MQ=255) gTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATCCCTGATTCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACTCCCTGTATCAAACCCTTCCATTCa > 1:534153/1‑300 (MQ=255) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGc < 2:252802/301‑1 (MQ=255) tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGACTTTTTATGTCGGATACGGCGTTTACGCCGC‑ATCCGACA‑TCCATGCCTGCTTCGTCGCTTGCCGCGTCTTTTCAGGCC‑TATTTTCACCTTTGGTTAATTTTTCAAACTATTCACCCCCCGTCTCTAACCCTGCCCTACCGCta > 1:310943/1‑299 (MQ=11) tctccTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGtt < 2:642754/298‑1 (MQ=255) tgtgctcttccgatctcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCaa < 2:694244/285‑1 (MQ=255) ccTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTAGCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGttaga > 1:642742/1‑298 (MQ=255) cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCCGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGTTCGGATAAGGCGTTTACGCCGC‑ATCCGACC‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TCTCTTAACCGTTGGTTAATTTTTCAAACTCTTCCCACCCGGTATCCAACCCTTCCATACAGCT‑CAGGTTCaa > 1:630006/1‑300 (MQ=255) cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCaa > 2:635767/1‑300 (MQ=255) ttcacgagagagCGCGATACCCTGATTTAGCGTGAGTTTGTAGGTCAGATAAGGCGTTTAGACCGCATCCGACATCAACGCCTGATGTGACGCTTAACGCGTCTTATCAGGCCGACGCCAGACAGCACAATAGCCTGATTTAGCGTGATGTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACCCCCGGTATAAAACCCTTCCATACAGCT‑CAGGTTCAAcc < 2:503317/295‑1 (MQ=17) cAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTTCCGCGTCTTATCAGGCC‑TCTCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCCAACCCTTCCATCCAGCT‑CAGGTTCAACCACTgaaccg > 1:88736/1‑296 (MQ=255) cAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCaaagatcggaagagcgt > 1:694231/1‑285 (MQ=255) tgCCTGATTTAGTGTGATTTTGTAGGTCGGATAAGGCGTTTAAGCGGCGTCCGACATCAACGCCGGATGCGACGCTTAACGCGTCTTATCAGGCCTCCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCt < 1:103028/300‑1 (MQ=255) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGCTCAACCAGTGCAGCGCCTTTTGCta > 2:103028/1‑300 (MQ=255) cccgATTTGTCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCAGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTg < 1:444426/298‑1 (MQ=255) ccTGATTGAGCGTGATTTGGTAGGTCGGTTAAGGCGGTTAGGCCGCATCCGAAATCAACGACTGATGCGACGCTTAACGCGTGTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCAGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTg < 1:23709/301‑1 (MQ=18) cgctcttccgatctggTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGACCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAGACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc < 1:129112/287‑1 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc < 1:7025/300‑1 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc < 2:231554/300‑1 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCg > 1:171372/1‑301 (MQ=255) aTTTTGTAGGTCGGATAAGGCGTTTAGGCCGAATCCGACATCAACGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATaa < 1:360163/300‑1 (MQ=255) tAGGTCGGATAAGGCGTTTATGCCGCATCAGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACcttc < 2:366265/301‑1 (MQ=255) ggTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACcttctt > 2:32388/1‑301 (MQ=255) ggTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGACCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctcagatcggaagagca > 2:129113/1‑287 (MQ=255) gaaTAGGGCGTTTATACCACATCCGACATCAGCGCCAGATGAGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCTCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCAGATAAGGCGTTTACGCCGC‑ATCCAACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCAc < 1:646512/298‑1 (MQ=21) tttagaccGCACCAGACATCAACGCCTGATGCGACGCTCACAGCGTCTTATCAGGCCTAAGCCAGACAGGGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGaa < 1:226660/294‑1 (MQ=25) gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAcatcat > 2:364622/1‑301 (MQ=255) ccTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGa < 2:637383/300‑1 (MQ=255) cTTAACGCGTCTGATCAGGCCTACGCCAGACAGCGCAATGTCCGGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCgg < 1:117639/301‑1 (MQ=255) ttAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCggg < 2:171373/301‑1 (MQ=255) tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTCCTCGGAATAACCGGTTCGGGAAATTGCagag > 1:395861/1‑301 (MQ=255) ttCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGc < 1:635756/300‑1 (MQ=255) cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCTGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGttt > 1:113984/1‑301 (MQ=255) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATAcc < 2:163272/296‑1 (MQ=255) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGTACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGt > 2:339493/1‑301 (MQ=255) ccTGATTTAGCGGGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTg < 2:630017/299‑1 (MQ=255) cTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCagatcggaagagcacacgtctgaactccagtca > 2:86834/1‑270 (MQ=38) tatcGTGATTTTGTAGGTCGGATAAGGCGTGTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCAtcgtcg < 2:395866/298‑1 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGTATATCATTCCCGCCCAGTACTCGGAATAATCGGTTCGGTAAATTGCAGTGCTGTGTTTGAAATACCAGGTTGCTTTTTCATCTTCgg > 1:574763/1‑300 (MQ=38) gCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACGTCATTCCCGCTCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCgg > 2:149005/1‑300 (MQ=255) gCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTATCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCgg > 2:380806/1‑300 (MQ=255) aTTTTGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGCGCTGCGGTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTaa > 2:344586/1‑301 (MQ=255) tttGTAGGTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCAGGAACTGGGAAT‑ACCGGTTTCGGGAATTGGAGGGCTGCGGTTGAAAATCCAAGTTGGCTTGTTAACGGCCGCCTTTAtt > 2:152470/1‑299 (MQ=37) gTCGGATAAGGCGTTTACGCCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTACTGCCCACg > 1:223786/1‑300 (MQ=255) aTAAGCCTTTTA‑‑CCCCGATGCGACACTCAATCCTTCATGCAACCCTT‑CCGCGTTTTTTCCGGCCTTGCCTTACCCTTTGGTT‑ATTTTTCCAACCTTTCCCCCCCCGTTTCCAACCCCTCCCTTCCGGTGCGGTTTCAACCACGGCGCCTCCTTTTCTTTTTCCTCCTCATTAAATCCTCCTCCCCCGTTAAGGACCATCATCCCCG‑CCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGTTgg < 1:152469/301‑1 (MQ=255) || GTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑CCGC‑ATCCGACA‑TCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCC‑TATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCT‑CAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGTTGG > NC_000913/4296126‑4296668 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |