| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,442,896 | A→T | F401Y (TTC→TAC) | secY ← | preprotein translocase membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,442,896 | 0 | A | T | 90.5% | 187.1 / 10.0 | 63 | F401Y (TTC→TAC) | secY | preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base A (2/4); new base T (26/31); total (28/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.19e-01 | |||||||||||
GAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTC > NC_000913/3442600‑3443189 | gAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTTGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCgtagta > 2:387427/1‑301 (MQ=255) tatGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACgg < 2:122682/301‑1 (MQ=255) tatGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGAACTGCAAATCACACGGATGACACCATCAGGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATGTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGAACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACgg < 1:221647/301‑1 (MQ=255) aatGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACgg < 2:582143/300‑1 (MQ=255) cGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTAAGGCATAATTTCTTGACGGAAGCACGACCTTTCATTTTTACTCTCCGTAACTTCTCGGTCGACCAATCATCGTCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGTCATCATCAGAGTTTTCATTTGAACCATAAAGTCCTTAATCACGACAACAACGATAAGCAGTGAGGACACAACCTAGTAGAACGTTaat > 1:226635/1‑299 (MQ=255) tGCTTCGGCTCGGCACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACTGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCggg > 2:572382/1‑301 (MQ=255) gCTTCGGCTCGGCACTGCGAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGa > 2:286311/1‑301 (MQ=255) tcggctcggcACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCa > 2:100785/1‑301 (MQ=255) ctcggcCCTGCAAATCACACGGATGACACCATCACGCTCTACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGAACGAACTTTCCTTTTTACTCTCCCTAACTTTGCGGGCGACCAATTATCCGCCATAGCCTTTCAGGTTCGCCTTCTTCTATTCGGACTCGTACTGACTGGAAGTCATCAGAATTTGCACTTTAACCATAAAGTCCGTAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCTCGCATGAACTCCGGGATCAGGc < 1:296051/300‑1 (MQ=255) ctcggcACTGCAAAGCACACGGATGACACCATCACGCTTAACGATTGTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTGTGCACTGGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGc < 2:596952/300‑1 (MQ=255) ccTGCGAATAACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCTTAATTTCTTGACGGAAGCACGAACTTTCCTTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCATAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTAGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCAACGTAGTAGAAAGGTACTTTAATTGCATCAAGCATGAACTCCGGGATCAGGCAGATaaa < 1:45689/300‑1 (MQ=255) aTCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAata < 1:236706/301‑1 (MQ=255) aTGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCa > 1:34072/1‑301 (MQ=255) tgaaaacagaaagcgaaaCGATAGTGCAGTGGTGGCATAATTTGTGTACGGAAGCACGAACTTTCAGTTTTACAAGCCTTAACTTCTCAGAAGACCGATAATCGACAGTAGAACTTAAGGTACGCATAATTCAAGGCAGAATCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCGAAAAAGGCAAGAATCACGACAACAACGATAAGCAGTGAGGTCACACCGTAGTAGAACGGTACGTGCATTGCATCACGCATGAACTGAGGGATAAGGCAGATAAAGGTAATATACAGCGCac < 1:363171/285‑1 (MQ=255) acacCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCacca > 2:414142/1‑301 (MQ=255) acacCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCacca > 2:630975/1‑301 (MQ=255) acacCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCacca > 2:136343/1‑301 (MQ=255) ccATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCaccaac > 2:305552/1‑300 (MQ=255) cACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAggg < 2:648245/301‑1 (MQ=255) gTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTAAGGCGGGTCATTACttt > 1:297439/1‑301 (MQ=255) gCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGa < 2:285171/300‑1 (MQ=255) gCATAAGTTCTTGACGGAAGCACGAACTTTCATTGTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCATAAATGCAGACTCATACTGACTGGACATCATCAGGGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGGTAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACTCATGAACTCCGGGATCAGGAAGATAAAGGTAATATACAGCGCCCCAACCAGCGTAAGGCGGGTCATTACTTTATCGa < 1:387422/300‑1 (MQ=255) cTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGc < 2:297443/301‑1 (MQ=255) tGACGGAAGAACGAACTTTCATTTTTACTCTCCGTAACTTCTCGTGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCg < 1:100784/301‑1 (MQ=255) aaCTTTCA‑TTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGa < 2:310470/301‑1 (MQ=255) tACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTgg < 1:414135/301‑1 (MQ=255) tACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTgg < 2:384405/301‑1 (MQ=255) ctcCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTTAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTACTAGAACGCAACCTTCATTGCATCACGCCTGAACTCCGGGATCAGGCAGCTACCGGTAATATACAGCGCACCCACCCGCGCCCGCCGGGTCCTTACCCTCTCGATCTACTTCGCCGTTTGCTCCCCCGCACCAACTccgcctac > 1:452208/1‑294 (MQ=255) ctcGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGAGGGTCATTACTTTATCGATATACTTCGCCGTTTGCGCCACCGGACGAATTCCTGGTACAAATGCACCGGa > 1:409415/1‑301 (MQ=255) cAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAAAATTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGGACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCACACCAACCAGGGTCAGGCGGATCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCAGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAgg < 1:572371/301‑1 (MQ=255) aaTTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGt < 1:286307/301‑1 (MQ=255) ccgatctgTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATc < 2:271086/294‑1 (MQ=255) aTCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTAt > 2:358441/1‑300 (MQ=255) ggCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATctg > 2:431367/1‑300 (MQ=255) gTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGCCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCCCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATcagatcgg > 1:271082/1‑294 (MQ=255) ccTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTc < 2:452215/299‑1 (MQ=255) tCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCgg < 2:34072/301‑1 (MQ=255) cAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATACAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCggg > 1:24076/1‑301 (MQ=255) attCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGtt < 1:41039/299‑1 (MQ=255) ttCGCCTTCTTCAATGCAGCCTCATACTGACTGGACATCATCCGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTg < 1:358436/300‑1 (MQ=255) tCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGaa > 1:541208/1‑301 (MQ=255) cttcttCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAAcc < 2:24076/301‑1 (MQ=255) tcttcAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCaa < 2:574270/301‑1 (MQ=255) ttcAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACg < 2:541218/301‑1 (MQ=255) aaaTGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGcc < 1:136342/300‑1 (MQ=255) gACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACATATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTaga > 2:524898/1‑301 (MQ=255) tCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGGCGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTagaaga < 2:226639/301‑1 (MQ=255) ctcttccgatcttcatcaGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACa < 2:414412/289‑1 (MQ=255) ctgactgGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGAGGGTCATTACTTTACCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCATCGGACTTCTACAGGCTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGCAGAAACag > 1:139090/1‑301 (MQ=255) actgGAGATCATAAGAGTTTGCACTTGAGCCATAAAGACCAGCATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCTCGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCATGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACagaag < 1:279190/301‑1 (MQ=255) tgGACATCAGCAGAGTTTGCACTTGAGCCATAAAATCCATAATCACGACCACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATAAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGAGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACagaagaa < 2:139091/301‑1 (MQ=255) tcatcaGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGGAGaacaaacaagatcggaagag > 1:414405/1‑289 (MQ=255) cACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCATGGTACAAATGCACCGGACTTCTCTAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTcgaagatcggaagagcgtcgggtagggaaagagtg > 1:128298/1‑272 (MQ=255) aCTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATaga > 1:548199/1‑301 (MQ=255) aTCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAATGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGAACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGCCTTCTTCAGGTTATCTGCTGTTTCACTCGGGTCGAAAACCAACGCCGTGTAGAAGCAACTGTAGAAGATGATTGAAGACTCACAGAGTAACACATAAAGCGGTTGc > 1:572288/1‑300 (MQ=255) aTCACGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAAATCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAAAAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGc > 1:404933/1‑300 (MQ=255) aCGACAACAACGATAAGCAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAg > 2:611331/1‑301 (MQ=255) aaGCAGTGAGGTCCCAACGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGGTCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCAATACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACATATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGc < 1:524888/301‑1 (MQ=255) cAGTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAAATCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCg < 2:404940/299‑1 (MQ=255) gTGAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAAt > 2:128240/1‑301 (MQ=255) gAGGTCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCTGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGAAAATATAGCGAAAttt > 1:402466/1‑300 (MQ=255) tCCCACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAAttgttg < 1:128239/300‑1 (MQ=255) cccACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGTGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTc < 2:409422/301‑1 (MQ=255) cccACCGTAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATtgttgt > 2:115905/1‑300 (MQ=255) | GAAAAATATGCGAAAAAATCAGCCTTGGCGCTGTTTATGCTTCGGCTCGGCACTGCAAATCACACGGATGACACCATCACGCTTAACGATTTTGCAGTTACGGCATAATTTCTTGACGGAAGCACGAACTTTCATTTTTACTCTCCGTAACTTCTCGGGCGACCAATTATCGGCCGTAGCCTTTCAGGTTCGCCTTCTTCAATGCAGACTCATACTGACTGGACATCATCAGAGTTTGCACTTGAGCCATAAAGTCCATAATCACGACAACAACGATAAGCAGTGAGGTCCCACCGAAGTAGAACGGTACTTTCATTGCATCACGCATGAACTCCGGGATCAGGCAGATAAAGGTAATATACAGCGCACCAACCAGGGTCAGGCGGGTCATTACTTTATCGATATACTTCGCCGTTTGCTCTCCCGGACGAATTCCTGGTACAAATGCACCGGACTTCTTCAGGTTATCTGCTGTTTCACGCGGGTTGAAAACCAACGCCGTGTAGAAGAAACAGAAGAAGATGATTGCAGACGCATAGAGTAACACATAAAGCGGTTGCCCAGGCTGCAAATACAGCGAAATTGTTGTC > NC_000913/3442600‑3443189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |