Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0009133,424,2570G→C100.0% 1.1 3noncoding (2527/2904 nt)rrlD23S ribosomal RNA of rrnD operon
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (2/0):  ref base (1/0):  total (3/0)

CTTAAAGGGTCAGGGAGAACTCATCTCGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCTTCCGCATTTAGCTACCGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCATCACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCG  >  NC_000913/3423983‑3424420
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                   
cTTAAAGGGTCAGGGAGAACTCATCTCGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCTTCCGCATTTAGCTACCGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGATCGGGACCGAACTGTCTCCCGACGTTCTAAACCCACCTCGCGTACCACTTTAGATGGCGACCAGCACGCCCCTTGAGACCTACTTCACcccccgactctagtgcacacacata                                                                                                                                            >  2:249881/1‑279 (MQ=11)
                                                                                                                   ccAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGATAGGTACCCAACTGTCCCACGACGTCCTAACCCCAACTCGCGTAACCCTTTAAATAGCGCACACCCTCACCCTTGGGACCTCCTCCCGCCCCAGGATGTGATGAGCCTACATCTAGCTGCCAGACACCGACCTCCATATGACCTCTCGGGCGTTATCCACCTGTCCCCCGCGGTATACCTTTTCGCCCACGAGCGCTGCCCCTGCCATTccgtacacacggaccacctt                        >  2:171647/1‑282 (MQ=2)
                                                                                                                                          ctctCGTACTAGGAGCAGCCCCCCTCAGCTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTCCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCTCACCCTTAGGACCTACTTCACCCCCAGGATGTGATGAGACGACATCGAGGTGCCAAACACCGCAGTCGATCTCAACTCTTGGGCGGTATCAGCCTGTTATCTCCGGAGTCCCTTTTATCCTTTGAGCGCTGGTCCTTGCAGTCAGAACCACCggccaaccatgctctcccttggtgcgtccttg  >  1:310006/1‑270 (MQ=11)
                                                                                                                                                                                                                                                                                  |                                                                                                                                                                   
CTTAAAGGGTCAGGGAGAACTCATCTCGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCTTCCGCATTTAGCTACCGGGCAGTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCATCACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCG  >  NC_000913/3423983‑3424420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.