Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,708,805	T→C	13.2%	R629R (CGT→CGC)	rsxC →	SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	1,708,805	0	T→C	13.2%	2.4 ‑0.4 ‑0.1	46	R629R (CGT→CGC)	rsxC	SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  new base (3/4):  ref base (19/16):  total (23/23)
Fisher's exact test strand distribution p-value = 6.91e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.88e-01

CCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAA  >  NC_000913/1708508‑1709105                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                               ccGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGCTCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGTCGATCCGCGCAAAGCCGCACGCGACGCCGCGATTGCCGGTGc                                                                                                                                                                                                                                                                                                              >  1:28412/1‑300 (MQ=255)   gTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCACCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGACCAGCAACAAGCTCATGCCGAACACAAAGAAAAGGGCGCTCCCAGCAAAGCCGCCGTCGCAGCGGCAATTCCCAGTGCCaa                                                                                                                                                                                                                                                                                                           >  1:119529/1‑301 (MQ=21)             aGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCCAAGCGCGCAAGCCGGAACCGCAACGAGCTAATGCGGAACCAGAAGCACACGTCTATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCACGGGCCAACGCACGCAAg                                                                                                                                                                                                                                                                                                 >  1:411508/1‑301 (MQ=21)                  gagCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCCAAGCCGCCGTCGCAGCCGCTATTGCCCGTTCCAAAGCGCGCACGCTGGCACAGCAACAGGCTAATGCCGAACCAGAACAACAGTGGGATCCCCGCACAGCCGCCCCCTCACCCGCTCTTGCACGTCCCAAACCAccccaacggaa                                                                                                                                                                                                                                                                                            >  2:590059/1‑291 (MQ=18)                          aaGGCAGAACTGCAGCCAACTACCGACGCAGCAACCG‑TTCCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCCCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAAc                                                                                                                                                                                                                                                                                    <  1:669173/300‑1 (MQ=14)                            ggCAGAACTGCAGCAAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTCTTGCCCGTGCCACAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAAAACAGGATGATCCGCGCAAAGACGCCGTCGAAGCAGCTATTCCCCGCGCCaacagcagaacgatgacacagcaacag                                                                                                                                                                                                                                                                                  >  1:213592/1‑276 (MQ=18)                                gAACGGAAGCAAAACAAAGAGGAAGAAACAG‑TGGCGGAACCAGGAAAAACTGC‑CGGGGAAGCAGCCAGCGACCGCGACAAAGCGCGCAAACGGGAAAAGCAACAGGGTAAGGCGGAACCAGAAGAACAGGCCGATCCGGGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGGGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGc                                                                                                                                                                                                                                                                                <  2:570824/299‑1 (MQ=11)                                    accagcaAACTAACAAGCCAGCAAACG‑GTGCTGCACCCCGTAAAATTGC‑CTCGGAAGCAGCTAGTGCCGGCACCAACACTCCAAAGCTGGAAAAGCAACAGCCTAATGCGGAACCAGAACCACAGGTCGATCCCCGCAATGCCGCCGTCGAAGCCGCTATGGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                                                                                                                                                                                                                                                          <  1:332944/299‑1 (MQ=17)                                     gcagcaAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCCAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCCCCAAGCCGCCGTCGAAGCCGCTATTCCCCGTGCCAACGCACGCCAGATGGCACAGCAACCGGATAAtcc                                                                                                                                                                                                                                                                          >  1:642242/1‑298 (MQ=18)                                      cagcaAACTACAGACGCAGACACAG‑TTGTTGATCCCAGTAAAACTGC‑CGTTGAAGCAGCTATCGCACGTGAAAAAGCGCGAAAGCTGGAAAAGCAACAGGATACTGCCGACACAGACGCACAGGTCGATCCTCGCAAAGCCGCCGTCGAATCCGCTATTGCCCGTGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAAGGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                                                                                                                                                                                                                                                          <  1:733487/299‑1 (MQ=17)                                          aaaCTAACCACGCAG‑AACCGTTTGCTGTGTCAGCTAAAAGTGCGCGTT‑AAGAAGCTATGTCCGGCGCAAAAGCGGCAAAGCTGGAAAGTAAACAGGTACATGAGGAACCAGTACCACGGGTGGAGCGGCGGAAAACCGCCTTATAAGCCGGGATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGAGCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGcc                                                                                                                                                                                                                                                                   <  1:751802/301‑1 (MQ=9)                                                aacggcgcagacacgttgtcggagcaaacaaaaaCAGC‑GGTTGAAGCAGCCGTCGACGAGGCCAGAGCGCGGAAGCTGGAACAGAAGCAGGCGAAAGCCGAAGCAGAGGTGAAGGTGGATCCGCGCAAGGACGGCGTCGAAGCAGCTATTGCCCGTGCAAAAGCGCGGAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGaac                                                                                                                                                                                                                                                              <  2:273991/271‑1 (MQ=14)                                                    ccgagcaACCG‑TTGCTGACGCCCGGAAAACGGC‑CGGGGAAGCAGCGATCGGCCGAGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAg                                                                                                                                                                                                                                                         <  1:590084/298‑1 (MQ=17)                                                     gcagcaACCG‑TTGCTGAACCACGAAAAACTGC‑CGTGGAAGCAGCTAGCACCCGCGCCAAAGCGAGCAAGCTGGAACAGCAAAAGGCTAATGCGGAACCAGAACAGCCGGTCAAGCCGCGCAAAGCCGCCGTATAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACTGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAATGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATTC‑CGAGCCAGAACAACAg                                                                                                                                                                                                                                                         <  1:14629/300‑1 (MQ=17)                                                                ttGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACATGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCCAAGACGCAATTGACCGTCCCAAACCACACAACCTGGAACAGCAACAGGCCAATACGCGA‑CCAGAACAAAAG‑CTCCATCcgc                                                                                                                                                                                                                                              >  1:345137/1‑300 (MQ=17)                                                                ttGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCAGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCCATTCCCCGCGCCAAGGCACGCAAGCTGGACCAGCAACAGGCTAATGC‑GGAGCCACAAGAACAG‑TTAGATCcgcg                                                                                                                                                                                                                                             >  1:206297/1‑301 (MQ=17)                                                                  agtgagccaaagaaaaCTGG‑CGTAAGAGCAGATAAGGCCCGGGACGAAGCGGGCAAGACGGAACAGCAACAGGATAATGCGGAACCAGAAAAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCAGCTATGGCCCGGGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCgcgc                                                                                                                                                                                                                                            <  1:153512/288‑1 (MQ=14)                                                                          aCGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCTCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGCACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGAGCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAACTGGAACAGCCACCAGCTAATGC‑CGAGCCCGaaacaaaggtagagacgcggcaccccgc                                                                                                                                                                                                                                     >  1:239215/1‑274 (MQ=14)                                                                                  cgtgacagtcatgaagcTATCGCCCGCGCAGAAGCGCGAAAGAGGGAACAGCAACAGGATAATGCCGAAGCAGAAAAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCGCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGACCAGGGCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAg                                                                                                                                                                                                                            <  1:254196/287‑1 (MQ=14)                                                                                                                        tcacccggAAGAGCAACAGGACAATACGGAACCGAACCCACCAGACGATCGGCGCAAACACCCCGTACAAGCCGTGATTGACCCCGCCAAAGCACTGCAGCTGAAACCGCAACAAGCTAAGGCTGAACCAGAATACCTGGTCGATACAGGAAAAGCCGCCGTCGAAGCAGCTATGGCCCGTTCCTAAGGAAGAAAACTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATACGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGTCAAAGCGCGCAAACGGGAACAg                                                                                                                                                                                      <  1:528892/295‑1 (MQ=9)                                                                                                                                    gCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCCACCTGGACCAGCCACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCCAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAACATGGAACAGCCACAGGCTAATTC‑CGAACCAGAAGAACAGAGTCACCCCGC‑CAACGACGCCCACCAAGCCACTATTGACCCACCCAAAGCCCCCACACgccaccacgacaccgctca                                                                                                                                                                           >  2:355687/1‑282 (MQ=14)                                                                                                                                          ggCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGCAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGCACAGCAACAGGCTAATGC‑CGAACCCGCACAACCG‑GTCGCTCCGCCCAAAGCCGCCGCGCAAACCGCTCCTTCCGCAGCCCAAACCACCCAACGGGAACAGCCACCGGccactcccgcg                                                                                                                                                                    >  1:202667/1‑291 (MQ=14)                                                                                                                                                  ctgcaccccacctacaGGTGGATCCCCGTAATGCGGCCGCTGAACCAGCTAGTCCGCTCGCCCAAGCTCGCAAGCTGGAACCGCAACATGCCAATGCGGAACCAGAACAGCAGGTCGATCCGCTCACAGCCACCGTCGAATCCGCTATTCCCCGCGCCACAGCACGCAAGCTGGAACAGCAACATGCTAATGC‑CGACCCAGCACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaag                                                                                                                                                             <  1:750999/287‑1 (MQ=11)                                                                                                                                                    aacgcagcacaaacggtcagtgcccgaaaaGCCCCCAGCGAACCCGCTATTACCGGTGCCAAAGAGCGTAAGCGGGAACCGCAACAGGCTAATGCGGAACCAGAAAAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGTTAATGC‑CGATCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaaga                                                                                                                                                            <  1:158257/272‑1 (MQ=14)                                                                                                                                                        cAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAg‑g                                                                                                                                                                                                                                                       >  2:696211/1‑204 (MQ=255)                                                                                                                                                          gAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCCAAGCCGCCGTCGAAGCAGCTATTGCCCGTGCCAAAGCGCGCAAGCGGGAACAGCAACAGGCTAATGC‑CGAGACAGAACAACAG‑GTCGATCCGGGCACAGACTCACACGCACACGCACTAGACCGATCCAAAGCGCGAATAAGTGCAGATCAACCGACACATGCGGAGACCCAAGGACAggaag                                                                                                                                                    >  1:631506/1‑298 (MQ=14)                                                                                                                                                                            cgaaaaGCCGGCGTCGAAGCGGCGATAGCAGGCGCAAAAGCACGGAAGCAGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGCCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTAGTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCg                                                                                                                                  <  1:198954/298‑1 (MQ=14)                                                                                                                                                                                           aaggagctcggagcgggtacaaaaGCG‑GCAAGATGGCAGAGCAACAGTCTAATGCCGACCCAGAAGGAGCGGTCGATCGGCTCAAACCCGTGGCCTAAGCCGCTATTTCCCGCGCAAAAGCCCGCAAGCTGGAACATCAACAGGATAATGC‑CGAGCCAGAACAACCG‑GCCCATCCGCGAAAAGCCGCCGTCGAAGTCGCTATTGCCCTAGCCAAAGCGCGCAAACTGGAACAGCAACCGGCTAATGCGGATCCAGAAGAACAGGTTGCTCCGCGCAAAGCTGCCGTCGAAGCGGCTATTg                                                                                                                   <  1:228004/279‑1 (MQ=255)                                                                                                                                                                                                cGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAACGCCGCCGTCGAAGCGGCTATTGCCCGGACCCAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCGCCGCGCAACGCTGccctacaccacgctattgaccg                                                                                                               >  1:39142/1‑280 (MQ=14)                                                                                                                                                                                                        cccATGCCACAACGCGCAAGCCTGCAAGGGAACAGCTTAATGCGGAACAAGCACAACAGGTCGAGCCGCGCAAAGCCGCCGTCGAAGGCGCCATTACCCGTGCCAAAACACTAAAGCTGTAACAGCAACAGGCTAATGC‑GGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGc                                                                                                      <  1:97027/301‑1 (MQ=14)                                                                                                                                                                                                        cccATGCCAAGGCGACCAAGACGGAACAGCACCAGTCAAGTGCGGAACCAGCAACAAGGGGCGATCAGCGCAACGCCGCATGGTACGCCGCCACTGCCCGGGCAAAAGACAGCAAGCTGGAACCGCAACAGGTCAATGC‑CGAGCCAGAACAAAAG‑GGCGAGCCGAGCAAAGCCGCAGTCGAAGCCGCTATGGCCCGAGCCAAAGCGCGAAAACGGGAATAGCAACAGGCGAATGCGGAGCAAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCGATTGCACGCGCCAAAGc                                                                                                      <  1:157251/301‑1 (MQ=255)                                                                                                                                                                                                            tGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAGAGCCGCCGTCGAAGCCGCTATTGGCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGATAATGC‑CGAGCCAGAACAACAG‑ATCGATGAGCGCAACGCCGCCGTCGAAGCCGCTATTACCCGAGCCAACGCGCGCAAACGGGAGCACAAACCGGATGATACGGAGCCCGAGGAGCAGGTGTAGCCGCGCAACGCTGCAGTCGCAGCGGCTATTCCCGGCGCCAGAGCACg                                                                                                   >  1:670173/1‑300 (MQ=14)                                                                                                                                                                                                                                    gCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAACGCCGCCGTCGAAGCGGCTCTTACCCGCGCCCCAGCCCGCAAACCGGCACAGCAACCGGCTAATCCGGGGCCAGAAGAACAGGTTGAACCACGCAAAGCGCCCCTCGAGACGGCTATTACCCGCCCCCAACAACGCAACACGGAGCACAAACAGGCtgaa                                                                          >  2:101101/1‑298 (MQ=14)                                                                                                                                                                                                                                          ggCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCGGCTATTGCCCGAACCAAAGCGCGCAAAAGGGAACAGCAACAGGCTAAAGCGGAGGCGGAGGAACAGTTCGGACCGCGCAAAGCTGCCATCGCAGAGGCGATTGCCCGGCCCACAGGACGCAAGACGGCACACCAGCAgacaaagtgcgta                                                                    >  1:671924/1‑289 (MQ=14)                                                                                                                                                                                                                                          ggCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGc                                                                                                                                                                                     >  1:22505/1‑188 (MQ=255)                                                                                                                                                                                                                                             caagactgAACCAAAAGATCCCGTCTATGCTGGCAACGCCGGCGTCCAACTCGCCATGCCCCGTGCCAAAGCACACAAGCTGGCACAGCAACAGGCTAATGC‑TGACCCAGAACACCAG‑GTCGACCCGCGCAAATCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCa                                                                 <  1:262591/294‑1 (MQ=14)                                                                                                                                                                                                                                                     aaCCACAAGAACCGGCTGATCCGGCCACGGCCGCCGTCGAGGCCGCCAGTGCCCGTGAAAAAGCGCGCAAGCTGAAACAGCAAAAGGCAAATGC‑CGCGCCAGAACAACAG‑GACGACCCGTGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAAc                                                          <  1:432892/300‑1 (MQ=17)                                                                                                                                                                                                                                                        gagcaacacacggagATCCGCGCAAAGCGGACGTCGAACGCGCAATTACCCGTGCCAAAGCACGCAAGAGGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGc                                                                        <  1:116129/269‑1 (MQ=17)                                                                                                                                                                                                                                                             gaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGGACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCCAAAGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCAGCGCAAAGCTGCCGTCGAAGCGGCTCTTGCACGCGCCAAAGCAAGACAACAGGCACCGCAACAGGCCAAtcagacacgagacacaacggttgca                                                  >  1:325288/1‑276 (MQ=14)                                                                                                                                                                                                                                                             gaaCAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAAACGGCTCATGCGGCGCCCGCACGACAGGTTGATCCACCGAAAGCTGCCGTCGAAACGTCTCTTGACCGCGCACAAGCACAAAAGATGGAACCGCAACAGGCTAGTCCGATGCCACAACAACAgataact                                                  >  1:662189/1‑294 (MQ=14)                                                                                                                                                                                                                                                             aacacgccataTCCGCTCAAATCCTCCAGCGAAGTACCTATTGACCCGGACAAGGGACGCAAGCGGGCACCGCCACAGCAGACGGC‑CGAGCCAGAACAACTG‑GGTGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCTCAAACTGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATc                                                 <  1:481944/291‑1 (MQ=17)                                                                                                                                                                                                                                                                 aGGTTGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCCGAGACAGAAGAACAGGTTGAACCGCGCAACGCCACCGTAGAAGCGACTCTTGCACGCGCCAAGGCCCGCAAACTGGACCACCAACAGGCAGATCCGGTGCCACAAACACAggacgcaccac                                              >  2:625456/1‑291 (MQ=14)                                                                                                                                                                                                                                                                  ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCACCAGGCTAATGCGGTACCCGAAGAACAGGTTGATCcgcg                                             >  1:457238/1‑300 (MQ=255)                                                                                                                                                                                                                                                                           gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAAGGCGGAGCCAGAAGAAAGGGTTGATCCGCGCCAACCTGCCGCCGAAGCGGCTCTTTGCCGCGCCAAGGCACGCAAGCCGGACCAGCAACAGGCCAAGGCGTTCCCACAAGACCAGGTTGCACCGCGCAACCCGGcg                                   >  1:218427/1‑300 (MQ=17)                                                                                                                                                                                                                                                                                               ccGCTATGGCCCGTGCAAAAGCACGCACGTGGCGACAGCAACAGGCACATGC‑GAAACAAGAACAACAG‑GTGGAGCCGCGCAAAGCCGCCGTCGAAGCCGCGATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTGGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGcc                 <  1:261/299‑1 (MQ=17)                                                                                                                                                                                                                                                                                               ccGATATTGCCCCTGCCAAAGCACGCAAGCGGGACAAGCAACATGACAACGA‑CGAGCCAGAACAACAG‑GTCGAGCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAGCGGGAACAGCAACCGGCTAATGCGGAGCAAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATGGCAGGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGcc                 <  1:90384/299‑1 (MQ=18)                                                                                                                                                                                                                                                                                                            tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCCAACGGGAACAGCAACCGGCTAATTCGGAGCCAGAAGAACCGGTTGATCCGCGCAACGCTGCCGTCGAAGCGGCTATTGCACGCGCCCAAGCACTCCAGCTTGCACAGCAACACGCTAATGCCGTCCCCAACGAACAGGTTGCTCCGCGCAAACGGGCAGTTGCCCACGCTCTCTCCCGCGCACCGGCCcaa  >  2:299371/1‑301 (MQ=17)                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                               CCGTAAAGCGCAAGCCAGAGCGAAACAGGCAGAACTGCAGCAAACTAACGACGCAGCAACCG‑TTGCTGATCCACGTAAAACTGC‑CGTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAACAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGC‑CGAGCCAGAACAACAG‑GTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTACCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTTGCCGCGGCTATTGCCCGCGCTCAGGCCAAA  >  NC_000913/1708508‑1709105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.