Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 4,296,268 | T→C | 32.3% | intergenic (+474/+168) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_000913 | 4,296,268 | 0 | T→C | 32.3% | 30.0 ‑1.5 ‑0.2 | 54 | intergenic (+474/+168) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
Reads supporting (aligned to +/- strand): new base (12/4): ref base (18/15): total (31/23) | ||||||||||
Fisher's exact test strand distribution p-value = 2.19e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.17e-01 |
TATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑A‑‑C‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAC > NC_000913/4295973‑4296562 | tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCTCGTCTTATCAGGCCTACGCCAGACAGCGCACTACCCTGACTTAGCTTGATTTTGTAGGTCGGATAAGCCGTTTACGCCg > 1:335587/1‑300 (MQ=255) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCCGACAGCGCAATAGCCTGCTTTCGCGTGATCTTGTAGGTCGGATAAGGCGTTTCAGTCGCACCCGAccta > 1:234195/1‑298 (MQ=255) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTGTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACCTCAACGCCTGATGCTACGATTAACGCGTCTTCTCAGGCCTACGCCAGACAGCCCACTCACCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGAGTTTACGCCGCATCCGACAt > 1:342332/1‑300 (MQ=11) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAACGTGATTTTGTAGGTCGGCTAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTCACGAGTCTGATCAGGCCTACGCCAGACAGCGGTATAGCCTGATTTCACGTAATTTTTTCTGTCGACTAAGGGGTTTACGCGGACTCCGACAt > 1:643245/1‑300 (MQ=11) tatagctctaaagtcTGATTTAGTGTGACGTTGTAGTTTGGATAAGGCGTTTACGCCGCATCCCACATCAACTCCTGATGCGACGCTCGCCGTGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCAACCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGcc < 1:673736/287‑1 (MQ=11) gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCCGGCCTACGCCAGACAGCGCAATAGCCTCATTTACCGTGATTTTCTCGGTCGGATACTGCGTTTACGCCCCATCCGACATCCACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTAAGCCATACACCGCCATATCCTGCTTTCCCGTTATTTTGTAGGTCGTCTACGCCTTTTCTCCCCCATCCGCCATctattcccgt > 2:587180/1‑291 (MQ=11) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACACCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGGTTCTGCCGCATCCGTCATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGCCCGCGCACTAGCCTGAGTTAGCGTGATTTTGTCGGTCGGATAAGGCGTTTCCGCCCCATTCGTCAtgcattccagttt > 2:582732/1‑289 (MQ=11) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTCCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACCCCTGCTGCGACGCTTAACGCGTCTTATCAGGCCTACGCCCGCCAGCGCAATAGCCTGCTTTAGCTTGATTTTGTATTTCGGATAATGCGTTTCCGCCGCCTCCGCCTTCAATCCCTgctccgccc > 1:566485/1‑291 (MQ=11) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCTGATAAGGCGTTTATGCCCCATCCGCCCTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAACAGCCTTATTTAGCGTGAGTTTGTATGTCGGATAAGCCGCTTACGcaacctacgaactcaatcccctattccgcc > 2:648309/1‑270 (MQ=11) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAAAGCCTGATGCGACGATTAACGCGTCTTCTCAGGCCTACGCCAGACCGAGCAATAGCCTGATTTAGCGTGCTTTTGTAGGACGGATAAGACGCTTACGCCGCCTCCGACATCAATGCCTGCTGCCACg > 1:367806/1‑299 (MQ=11) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGTCCTCCGCCCGACAGCGCAATCGCCTGATTTAGCGTGATTTTGTCGGTCGGATAAGGCTTTTACGCCGCATCCGACCTCAATGCCTGATGCGAGGCttgc > 2:605640/1‑298 (MQ=11) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCCGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAGGGCTGTTACGCCCCATCAGACGTCAACgaccggcgcagctcttac > 2:80672/1‑283 (MQ=11) gtgtcgtagctttgtagaatagccagcgccgcAGCTCACACCAACCTCTGACGCCATGCTTGCCTCGTCTTTTCAGGCCTACCCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCCTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTAACGCGTCTTATc < 1:321302/274‑1 (MQ=11) aTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCCGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATAAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTATCGTACTTTTGTAGGTCTGATAAGGAGTTTACGCCGCATCCGACATCAATGCCTTATACGACGCTTGCCGCGTCGTATc > 1:429638/1‑300 (MQ=11) gtaggccgctgaggctgttgccgccgcACGCGACAGCAACGCGGGGTGCGACGTTTGCCTCTGCTTATCAGGACTCCGCCAGAGCGGGCAATATCCTGATTTAGCGTGATTTGGTAGGTCGGATAAGGCGTTTAGTCCGCATCAGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc < 2:373747/279‑1 (MQ=11) tCGGTTAATGCGTTTACGCCGCATCCGAAAGCAACGCCTGATGCGACGCTTTCCGCGTCTTATCAGGCCTACGCCAGACAGCTCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatct < 1:605664/300‑4 (MQ=11) gCGTTTACGCCGCATCCGACATCAACGACTGCTGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGCTACGAAGCTTAACGCGTCTTATCCGGCATAAGCCAGACAGCGCAATCGCCTGACTTAGCGTGATTTTGTAGTTCGGTTACGGCGTTTACGCCGCCTACGCCACCATGGCCTGCTGCGCCTCTGGCCTCGTCTTAGCAGACCTaacttaacagtttt > 1:707188/1‑288 (MQ=11) cgccgcATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTGTGTAGGTCGGATAAGGCGTTTACGCCGCATACGACATCAATGCCTGATGCGACGCTTAACGCGTCTTATc > 2:321296/1‑274 (MQ=25) tAAGGCGTTTACGCCGCATGCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCAAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTGGGTCGGCTAAGACGTTGATGCCGCATCCGACATCAACACCTTATGCGGCGGTTAACGCGTCTTATCAGGCCTACGCCAGACGCCCAAATAGCCGGATGTAGCGTGAATTTGTAGGTCGGATCAGGCGATA‑‑C‑‑A‑‑C‑CAGCATCCGACATCAATGCCTAGTGGGACGATTGCCGCGTGTTCTACGGCGTATGTTAAcc > 1:739110/1‑300 (MQ=11) aggtgtttgtggagcgtaacGACATGATCGCCGGATGCGACGTTGGACGCGTCTTAGCAGGCCTACTGCAGCAAGCGCAAAAGCCTGATTTAGCGTGATTTTGTAGGGCGGAGAAGGCGTTGATGCGGCATCCGCCAGCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAcc < 2:530762/280‑1 (MQ=11) ggCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTTATTTTGTAGGTCGGATACGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCCATGCCTGATGCGACGCTTGCCGCGTCTCATGAGGCCTATGTTAACCGTTg > 2:257762/1‑301 (MQ=11) ccATCCAGGCCCGATGCGACGCTTGACGCAGCTTATGTGTCCGACGCAAGCCCACGCAAGGGCCTGATTTAGCTTAATTGTGGAAGTCGGATAAGGCGTGTATGCCGCATACTACATAAGCGCTTGAAGCGACGCTTAACGCTGCTGATCAGGCATACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc < 1:582756/296‑1 (MQ=11) ccgtcctggggcgcagctggctgtgtgtcaTCAGGACTAGGCCAGACAGCGCAAAAGGTTGATGTAGACGGAGTGTGTCGGCAGGATAAGGCGTGTATGCCGCAGCCGACAGCAACGCCTCATGCGACGCTTAACGCGTCGTATCAGGCCTACGCCAGACAGAGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCacac < 2:429627/272‑1 (MQ=14) cGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTCGCGTGATTTTGTCGGTCGGATCAGGCGTTTATGCCGCATCCGCCCTCAACGCCTGATGCTACGCTTAACGCGTCTTCTCAGGCCTACGCCAGACCGCGCCGTCGCCTGATTTATCGTGCTTTTATCGGTCGGATACTGCG‑TT‑‑T‑‑ACGC‑C‑GCCTCCGCCGTCACTGCCTGATGCGCCCCTTCCCTCATCTTCTCCGGCCTATCTTCACCTTTGGTTAATTTTTCAAACTCTTccctcc > 1:450962/1‑295 (MQ=11) cgaggcgcagctggcggctttttATCAGGCCTACGCCAGAACGCGCAAAGGCCTGGTTTAGCGTGAATGTGTAGGGCGGATAAGGAGTTTATGCCGCATCCGACATCAACGGCTGATGCGACGGTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTa < 2:38625/280‑1 (MQ=14) tGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGCCGCTTGCCGCTTCTTACCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGtcctt > 1:38627/1‑297 (MQ=14) acgctggccgcgTCTTACAAGGCCGACTCAAGACAGCTAAATAGCCTGATTTAGCGTGATTTGGTAGGTCGGATAAGGTGTTCATGCCGCTTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACTCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAc < 1:648335/292‑1 (MQ=14) ccctgtcgtcgTTTTCTCAGCTCTCCGCCATAACGCGTAATCGCCTTATTTAGCGTGATTTTGTTGGTCGGATAAGGCGTTTATGCCGCACCCGTCATCAACGCTTGATTCGAAGCTTACCGTGTCTTATCAGCCCTCCGCCCGACAGCTCAATAGCCTGATTTGGCGTGATTTTGTAGGTCGGATTAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCTACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACTCCCGGTATCAAAcc < 1:356066/291‑1 (MQ=255) cGCTTGCCGCGTCTTATCAGGCCTACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGGTTATGCCGCATCCGACATCACCGCCTGATGCGCAGCTTCACGCGTCTTCTCCTGCCTACGCCCGACAGCCCCATCGCCTTCTTTAGCGTGATTTTGTATTTCGGATAAGGCG‑GT‑‑T‑‑A‑‑CGCATCATACGACATCTATGCCTTCTGCGCCGCTTACCCCGTCTTATCAGTCCTCTCTTGACCGTGGGGTACTTTTTCATCCTCTTCACACCCGTTCTCAACcc > 2:684066/1‑300 (MQ=2) cGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAcc > 1:614966/1‑300 (MQ=255) cGCTTGCCGCGTCTTACCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTCGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCCTCCGACCTCAATGCATGATTCTACGCTTGCCGCGTCTTATCAGGCCTATCTTACCCGTCGGTTCCTTTTTCCAACTCTTCCTACCCGCTacccaccc > 2:101851/1‑293 (MQ=11) ttggttATCAGGCCGTCGCAGGACACCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTTGGATCAGGCGTTTATGCCCCATCCGACATCAACGACGGACGCGACGCTTAACGCTTCTGATCAGTCTTACGCCAGACAGCGCAATAGCCTGATTTAGCGTAATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 1:263273/296‑1 (MQ=17) gtgctgaacAGTCCTACGCGATACATCGCAGTGACATGGTGGAGCGTGGTTGTGGAGGTCGCATAATGCGTGTCTGCCGCATCCGCCATCTATGCCGGGTGCGTAGCTTAACGCGTCTTATCAGGTCTACGCCAGACAGCGCAATATCCTGATTTAGCGTGATTTTGTAGGTCGGATAACGCG‑TT‑‑T‑‑ACGC‑C‑TCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACACTTCACACCCGGTATCAAACCCTTCCATAc < 1:446629/292‑1 (MQ=17) gggtttaaccggcgcaggCCAGACAGCGAAAAAGCCGGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCACCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 1:236663/283‑1 (MQ=17) gagcTTAGCAGGCCTAAGCCATACAGCAGAATAGCCTGATTTAGCGTGAGTTTGTAGGCAGGATAAGGCGTGTATGCCGCAACCGACATGAACGCCTGATGCGACGCGTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 1:460341/297‑1 (MQ=17) cgtctgatgaggctgtcggcagcacgcgcAATAGGCTGATTTAGCGTTATTTTTTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCGGATGCGACTCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 2:300214/275‑1 (MQ=17) tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCATGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTCGCGTAATTTTGTAGGTCGGATAAGGCG‑CT‑‑TGCG‑‑C‑C‑GCATCCGACCTCAATGCCTGATGCGACATTTGCCGCGTCTTATCAGCCCTATCTTACCAGTTGGTTTATCTTTCCAGCCCCTCAACCCCGGTATCAGACCATTCCATTCAGCTc > 2:108430/1‑300 (MQ=11) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATCGCCTGCTTTCGCGTGATTTTGTAGGTCGGATACGGCG‑TT‑‑TCCG‑‑C‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTACCCGTTGGTTAATTTTTCAAACTCTTCACCCCCGATATCAAACCCTTCCCTACCGCTCCGTTTCA‑Aca > 1:565694/1‑299 (MQ=14) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTTATTTAGCGTGATTTTGTAGGTCGGATACGGCG‑TT‑‑T‑‑ACGC‑C‑CCATCCGACATCAATGCCTGATGCGACGCTTTCCGCGTCTTCTCAGGCCTATCTTACCCGTTGGTTACTTTTTCACACTCTTCACACCCGGTACCCAACCCTTCCATCCACTCCCGGTTCA‑ACCa > 2:102714/1‑301 (MQ=14) acggcAGCGAAATCGCCGTGTTTTGGGTGATTTGGGAGGGCGGATAAGGCGTTTAGGCCGAATCCGAAATCAACGCCGGAGGGGACGCTTAACGCGTCTTAGCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGc < 2:335581/297‑1 (MQ=18) gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTATGTCGGGTACGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGCTGCGCGGCTTGCCGCGTCTTGTCAGGCATATCTTAACCGTTGGTTAATTTTTCCACCTCTTCACACCCGGTATCAAACACTTCCACACAGCACCGGTCCA‑ACCCATGCAccga > 2:694041/1‑299 (MQ=14) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTCCGACAAACAGCGCAATAGCCTGAATTAGCGTGATTTTTTAGGTCGAATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCAGCCGACCTCACTGCCTGCTGAGACGATTGCCGCGTCTTATCAGGCCTCTATTCACCGTTGTGTACTTTTTCCCACTCTTCACACCCGATCTACAACCCTGCCAtcacgaccaccttaccccccttccccgcc > 2:492174/1‑272 (MQ=11) tggcctggtttgacggtaTTTTGTAGGTCGGATAAGTGGGTGAGGCCGCATCCGACACCAACGCCTTATGGGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGc < 1:257768/284‑1 (MQ=18) tacctcgatgtatcttGAGTTTGTAGTTCGGAGAAGGCTTTTCTTCCCCAGCCGACTGCAACGCCGTATGCTACGCTTAACCCGTCTTATCAGGCTGACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTTGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACAGCAATGCCTGATTCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGc < 1:213936/286‑1 (MQ=18) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGCCGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGTTTTAGCGTGATGTTGTAGGTCGGGTAAAGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCGGGCCTATCTTAACCGTTGGTTAATTTGTCAAACTCTTCACACCCGGTGTcca > 1:190918/1‑253 (MQ=14) ccTGATTGAGTGTGAGTTTGGAGGTGTGGTAAGGCGTTTAGTCCGCATCCGACATCAAAGCCTGATGCGACGCTTAACGCGTCTGATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTTATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGCt < 2:126663/299‑1 (MQ=18) taTTTAGCGTGATTTTGGAGGTCGGAGAATGCGTTTATTCCTCATCCGACATCAACTCCTGATGCTGCGCCTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTGTGTAGGTCGGATAAGTCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGCTTGttc < 1:419299/300‑1 (MQ=18) tttGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCCATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCCCAGGTTCA‑ACCAGTGCAGCCCCTTTTGCTTGTTCTTCTCGATaaaaa > 2:306614/1‑300 (MQ=255) tggttgggctgATAAGGCGTTTAAGCCGCATCCGACATCACAGCCTGATGCGCCGCTTAACTGGTTGTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAAcc < 2:342325/291‑1 (MQ=21) gATAAGGCGTTTATGCCGCATCCGACATCAACTCCTGATGCGACGCTTAACGCGTCTTATCAGTCCTACGCCAGACCGCCCAATAGCCTGATTTAGCGTGATTTTGTAGTGCGGATACGGCG‑TTTCT‑‑G‑‑C‑C‑GCATCCGACATCAATGCCTGATTCGCCGCTTGCCGCGTCTTATCACGCCTATCTTAACCGTTGGTTACTGTTTCACACTCTTCACACCCGGTCTCAACTCCTCCCATACACCAC‑TGTTCACACCTGTGCAGCGCCTTTTCCTTGTTCTTCTCTATAAAACCTTCTTCTCCg > 2:549795/1‑301 (MQ=17) gCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAACCCCTTCCATACCGCTCAGGTTCA‑ACCATTTCACCGCCTTTTGCTTTTTCTTCTCGATAAAACCTTCTCCACCTTTTaaa > 1:587919/1‑300 (MQ=18) tgtATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑G‑‑ACGC‑C‑GCATCCGCCATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAc < 1:574436/299‑1 (MQ=255) aTGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGc < 2:506508/230‑1 (MQ=255) aTGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑ACGC‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGc > 1:506531/1‑230 (MQ=255) | TATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TT‑‑T‑‑A‑‑C‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCA‑ACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAC > NC_000913/4295973‑4296562 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |