| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,355,035 | G→A | R146C (CGT→TGT) | sapB ← | antimicrobial peptide transport ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,355,035 | 0 | G | A | 98.4% | 184.6 / NA | 64 | R146C (CGT→TGT) | sapB | antimicrobial peptide transport ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (29/34); minor base C (1/0); total (30/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGAGGAATAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACGCCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAGTGGATCAG > NC_000913/1354739‑1355320 | gCGAGGAATAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCAACAGGCGGATCACTTCAGTTGTTGGAGCAACCGAAAGGGTGAGCACGGGCAATATCATATGGCGGATTGCGCGCATGATAATTTCATCCCGCCATGGTGAGTCCGAAAGCAAGGCATCAACCAACGCCAAAACGGGAATGGGATGCACTTCGTCGGGCAGAACGAAACAcccc > 1:562402/1‑300 (MQ=255) accccgcggGAACGCGTACTGACGAACGTGGCGACACAAAATATGAAAGCGCGACAAACCGCGGGTCGCTGCCGCTTTTACAGAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGc < 1:9080/296‑1 (MQ=255) cggTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTTGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGCTTGAGCTCATGCTCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAACCGGTTTCACTTCGTAGAGCAGCTCGAAACAACCTGAAACGGGcaacca > 2:404195/1‑300 (MQ=255) cgcgTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCCCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCCTCAATCAACGAAAAACCGGTAAACGGTTTCACTTCGTAGCGCAGCTCGAAACACCCTGAAAAAGGCAACCAACCttc > 1:358173/1‑298 (MQ=255) gCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTTAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGTTAAGAGCTTTCACTTATGAGAGGAGATCGAAACACACCAAACCGGGCAACCAAACTA‑ACgatatgg > 1:413932/1‑294 (MQ=255) gCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGGGAGTCCGAACGCCAGGCATCAATCAACGCAAAACCGGTAACCGGTTTCACTTCGGAAGGCAGATCGAAAACCCCCGAAACGGGaaaccaactcacacggaggt > 1:631664/1‑288 (MQ=255) gAACGAGGCGACGCAAAATAGTAAAGCGCGAAAAACCGCGGGTCGCCTGCGTTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACa < 2:225619/301‑1 (MQ=255) gACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCAAAACACCCCGAAACGGGCAACCAACCTACGCG‑GAGGGAACAAAACAACgg > 1:571755/1‑300 (MQ=255) aaaTAGTAAAGCGCGACCAACCGCGGGTCGCCGCCGCTTTTACATATTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAg < 2:105555/301‑1 (MQ=255) gACAAACCGCGGGTCGTCGCCGCTTTTACATAGTTCTGGTAATACACTTGGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGa < 2:358287/301‑1 (MQ=255) aaacccGCGCGTCCCCGCCGCTTTAGCATAGTTCTGTTCATACACTTCTCTAGTGCTGATCCGCTTCCGGCGGATCACTTCAGTTTTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGTTTGCTCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAac < 2:562556/297‑1 (MQ=255) caaCCTCGGGTCGCCGCCGCGTTTACATAGTTCTGGTCGTACACTTCGAAAGGGCTGATACGCATCCGGCGGCTCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCAATGGTGAGTCCGAAAGCCAGGCAGCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAaca < 1:265359/300‑1 (MQ=255) aCCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCCGATCGAAACACCCTGAAACGGGAAACCACCATA‑GCGCGCGTGAACAAACCAGCGCCAACAAAACAGACAACCACAACAcc > 1:241891/1‑301 (MQ=255) cctgcTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGc < 2:631841/298‑1 (MQ=255) cTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGAACCCAACCAA‑GCGTGAGTGAACAAAAAAGAGTAAACAGAAGAGACAGCAAGAACACCGGGCTTGAAAACCCCa > 1:411840/1‑300 (MQ=255) ttttACATATTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAg < 2:571910/300‑1 (MQ=255) tttACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGCTCGCAACACCCTGAAACGGGCAAACAACCTA‑GCGTGAGTGAACAAAACAGCATCAACAGAAGCGCCAGCCAGAACACCGGGCGTGAAGAGACCAga > 1:68298/1‑299 (MQ=255) aTAGTTCTGGCCATACACTTCGAGAGTTCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCg < 2:411962/301‑1 (MQ=255) gcttccacTTCTATAGTGTGTTTACCCATCAGGCGGGTCACTTCACTTGTTGGAGCCACCGACAGTGTAATCACGGGCAATAGCATAGGGCGGATTGCGTTCATGATCATTTCAGCCCGCCATGGTGAGTCCGAAAGCCAGGCATGAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAACCACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTg < 1:455482/295‑1 (MQ=255) cATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTg < 2:262267/299‑1 (MQ=255) cATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATGGAAAAACCACATAAGGCAATGGCGTTg > 1:262188/1‑299 (MQ=255) cATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAAAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGAGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGccagtgcgtgta > 2:62616/1‑289 (MQ=255) aaacccTTCGAGAGTCCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGTGGATCACGGGAAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATc < 1:411704/296‑1 (MQ=255) ttCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCAAGAAAACCGGGATGGAAAAGCCAAGTAAGGCGATGGCGTTGGACAAGtt > 2:324861/1‑300 (MQ=255) tGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGCAATCGGTTTCACTTCGTAGAGCAGACCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCACAAGAAGCGCCAACCACAACACCGTGATTGACAAGCCCAGGAAGGCgctcgggttcgaaaagttatcgttcc > 2:585839/1‑275 (MQ=255) tACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACAAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGACAGCCAGAACACCGGGATTGAAAACACAAGAAAGGAGATGGCGATGATTAAGTTATCCATCCACTTATg > 2:70936/1‑301 (MQ=255) aCGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCa < 2:247845/221‑1 (MQ=255) cATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGCAGCGCCAGCCAGAACACCGGGATAGAAAAGCCCAGACAGGCGAGGGCATTGCGCAAGTGATCCTGCCACTTATGgcgc > 1:587437/1‑301 (MQ=255) cATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGgcgg > 2:228795/1‑300 (MQ=255) actaGGCCGATCACTTCCTGTCTGTGCGGAACAGACAGGGGGATCAGGGGCAACATCTGAGGGACGATAGCGCTAATGATCAAGTGCTCCCGCCATGGGGACTCCGAAAGCCGGGCATCGATCAACGCAAAACCGGGAATCGGTCTCACTACGGAAAGCTGATCGAAACACCCCGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGAGCCGGCCAGAACACCGGGATTGAAAAGCCAAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGcgcg < 1:116910/298‑1 (MQ=255) aTCAGGCGGATCACTTACGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGAGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGcgcg < 2:241959/301‑1 (MQ=255) gtagttgGCGAAGACGAGATGGTAGTCACGGGGTATATCATAGGGCTGAGTGCGCTCATGATCAGTTCATCCCGCCATGGTGAGGTCGAAAGCAAGGCCGCAATCAACGCAAAACCGGTAAACGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGACAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAGCAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATcc < 1:404073/298‑1 (MQ=255) cgagctgggTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGcc < 2:678673/295‑1 (MQ=255) ggggTGATAACGGGAAAAGACATAGGGCGGATTGCGCTATGGATCGTTGCATCCCGCCAGGGTGAGTCCTAAAGCCAGCCATCAAACAACGCAAAACCGGGAATCGGTGTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCcaacaa < 1:62602/300‑1 (MQ=255) gggTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATTGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCTCGGCAATCCACCCCACGGGGCTGcacgagcg > 1:678480/1‑294 (MQ=255) gggTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATTGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCcaacca > 2:222385/1‑298 (MQ=255) gTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTTCCACTTATGGCGCGTAATTCAGGCAATCATCTCCCCGGGGATGCCCACAGTc > 2:681190/1‑300 (MQ=255) gATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCTACTTATGGCGCGTAATCCCGGCAAGCATCCCCGTGGGGATgatggc > 1:421734/1‑289 (MQ=255) gATCACGGGACATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCGTGGGGATgattgc < 2:421857/294‑6 (MQ=255) caaCGGGCAAATCCATATGGGTGTTTGCGCTCACGATCATTTCCCCCCGCCATGGTGAGGCCGAAAGCCAGGCATCAATCAACGCAAGACCGGGAATCGGTTTCACTTCGTAGAGCAGAGCGAAACACCCTGAAACGGGCAACCAACCCA‑GCGTGAGTGAACAAAACAGCGTCAAAAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAgcgc < 1:585678/299‑1 (MQ=255) aaacATATGGGGGATTGCGCCCAGGACCATTTACTCCCGCCAAGGTGGACCCAAAAGCCAAGCACGAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAGACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAg < 1:238908/298‑1 (MQ=255) atGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAgg < 2:587599/301‑1 (MQ=255) aTGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCAAGTAAGGCGAAGGCGTTGATCAAATTATCCTGACACTGATGGCCCGCAATCCCGGCAATCAGCCACACGGGGAGTCCAACAACCAGCGC‑AAAACCGAAGGCGAGGCTGCACAACTCCaacc > 1:380778/1‑298 (MQ=255) tCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCgtga < 2:326953/120‑1 (MQ=255) tCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCgtga > 1:326851/1‑120 (MQ=255) tCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCGCTTACGGCGCGTAATCCCGGCAATCATCCCCACGGGGCTGCCAACAATCAGCGC‑AAAACCGAAGGCGAGAATGCACAGTTCCATCGTCGCCggg > 2:396642/1‑300 (MQ=255) ccccgacccgaccctctcacattttgCCAGGCATAAATCAACGCAAAACCGGTAATCGGTTACACGTCGTAGAGCAGACCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACCGCGTCAACAGAAGCGCCAGCCAGAACCCCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGa < 1:440678/276‑1 (MQ=255) ccaccagCCATGGAGAGCCCGAAAGCCAGGCAGCAATCAACGCAAAACCGGTAATCGGTTTCACTACGTAGAGCAGATCGAAACACCCTGGAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAAGCAGCGC‑AAAACCGAAGGCGACGATggaactgtgcatcctcgccttcg < 1:278450/294‑23 (MQ=255) accccgcactgatgcacgcGAAAAACAGGAAACAATCAACGCAACACAGTTAATCGGTTTCACGTCATAGAACAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGACAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTGATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAg < 1:395457/283‑1 (MQ=255) aTCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAATAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATTGCGCGTAACCCCGGCAACCATCCCCACGGGGATGCCAACCATCAGCGC‑AAAACCGCAAGCGAAGATGCACAGCTCCAtacctctcggaca > 1:536462/1‑288 (MQ=255) ccGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGCTTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACGTATGTCGCGTACGCCCGGACATCATCCCCACGGGGACGCCAACAAGCA‑CGCAAAAACAGACGGACAGGATGCTCAGTGCCacacgagcagggaagacc > 1:399016/1‑284 (MQ=255) ggggAGTCCGAAAGCCAGGCATCAATCAACGCAAAACAGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTa < 2:97125/298‑1 (MQ=255) ggAGTCCAAAAACCAAGCCTCAACCAACGAAACACCGGTAATCGGTTTAACTTCGGAGAGCAGATCGAAACACCCAGAAACGGGCAACCCACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACGCCGGGAGTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCGCTTACGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAAc < 1:396524/300‑1 (MQ=255) aaaaGCCAGGACTCACACAACGCAAAACCGGTAACCGCTTTCACTTCGTAAAGCAGACCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGGGAGTGAACAAAAAAGCGTCAACAGAAGAGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCgg < 1:9507/300‑1 (MQ=255) aaaGCCAGGAATCAACAACCGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGACCGAAGCACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGAGTGAAAAGCCCAGTAAGGCGATGTCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGc < 2:399134/301‑1 (MQ=255) gCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCCTCGTCGCCGGGAAGACCTTTTTTAACTGTTCGGccac > 2:463061/1‑298 (MQ=255) gCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCAACGTTCCATCGTCGCCGggaggatcggaagagaacacgtctaaac > 2:440802/1‑279 (MQ=255) aCGCAAAACCGGTAATCGGTTGCACTGCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGcac < 2:544003/242‑1 (MQ=255) gCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCAtcg > 2:430553/1‑250 (MQ=255) gCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCAtcg < 1:430430/250‑1 (MQ=255) cAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGACAATCATCCCCACGGGGATGCCAACACTCCGCCC‑AAACCCGAAGGACAGGACGCCAAGTTCCACCGTCGCCAGCCAGGCCCCTTTTACCTTTTCTGTCATCGTTTGCCCGTTatctct > 1:452396/1‑296 (MQ=255) cGGTAATCGGTTTCAATTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAAAAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAac < 2:68312/301‑1 (MQ=255) cTTCGTAGAGCAGATCGAAACACCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACAAAAATCCCAGTg > 2:603768/1‑301 (MQ=255) agagCAAATCGAAACACCCGGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACACACGCGCCAGACAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAGTGGATCAg < 2:28839/301‑1 (MQ=255) | GCGAGGAATAACCGGCGGTAACGCGTTATGCAGAACGTGGCGACGCAAAATAGTAAAGCGCGACAAACCGCGGGTCGCCGCCGCTTTTACATAGTTCTGGTCATACACTTCGATAGTGCTGATACGCATCAGGCGGATCACTTCAGTTGTTGGCGCAACCGACAGGGTGATCACGGGCAATATCATATGGCGGATTGCGCTCATGATCATTTCATCCCGCCATGGTGAGTCCGAAAGCCAGGCATCAATCAACGCAAAACCGGTAATCGGTTTCACTTCGTAGAGCAGATCGAAACGCCCTGAAACGGGCAACCAACCTA‑GCGTGAGTGAACAAAACAGCGTCAACAGAAGCGCCAGCCAGAACACCGGGATTGAAAAGCCCAGTAAGGCGATGGCGTTGATCAAGTTATCCTGCCACTTATGGCGCGTAATCCCGGCAATCATCCCCACGGGGATGCCAACAATCAGCGC‑AAAACCGAAGGCGAGGATGCACAGTTCCATCGTCGCCGGGAAGACCTCTTTTAACTGTTCGGCAATCGGTTGACCGTTAATGCTGGAAACACCAAAATCCCAGTGGATCAG > NC_000913/1354739‑1355320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |