New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4250507 =	155 (1.110)	6 (0.040)	5/560	18.0	3.9%	intergenic (+33/‑196)	malM/yjbI	maltose regulon periplasmic protein/pseudogene, SopA‑related, pentapeptide repeats‑containing
	?	NC_000913	4250527 =	147 (1.080)					intergenic (+53/‑176)	malM/yjbI	maltose regulon periplasmic protein/pseudogene, SopA‑related, pentapeptide repeats‑containing
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

CCCCATTTAAATTACGTAGTAAATCAAGATCTACTATATTATTTCCTTGCACCACATCATGTTTCATCAAAGAGTTATTGCCGCCAGAATTTAGGATATGACTTATCATAAAACCTCTGCATAACAGAAATAAAATAACCTGGAAAAGTAGCCTGAATGTCCAGACACTACCGGCGAAAGGAAAAGAATCTCTGATAAGGCATTGAGATAATGGATATTCTTAGTGAAGAAGAAGTGAGTTACTATAAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4250811‑4250507 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAAAC  >  NC_000913/4250527‑4250825                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccccctgttaatttcgttagAAATCAAGATCTACTATATTATTTCCTTGCACCACATCATGTTTCATCAAAGAATTATTGCCGCCAGAATTTAGGATATGACTTATCATAAAACCTCTGCATAACAGAAATAAAATAACCTGGAAAAGTAGCCTGAATGTCCAGACACTACCGGCGAAAGGAAAAGAATCTCTGATAAGGCATTGAGATAATGGATATTCTTAGTGAAGAAGAAGTGAGTTACTATAAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACG                                                                                                                                                                                                                                                                                                                 <  1:950600/281‑1           ATTACGTAGTAAATCAAGAGCTACTTTTTTATTGCCTTGCACACAATCATGTTTCATCAAAGAGATATTGCCGCCAGAATTTAGGATATGAATTATCATAAAACCTCTGCATAACAGAAATAAAATAACCTGGAAAAGTAGCCTGAATGTCCAGACACTACCGGCGAAAGGAAAAGAATCTCTGATAAGGCATTGAGATAATGGATATTCTTAGTGAAGAAGAAGTGAGTTACTATAAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGAC                                                                                                                                                                                                                                                                                                                  <  2:807069/290‑1                                                                                                                                            CTGGAAAAGTAGCCTGAATGTCCAGACACTACCGGCGAAAGGAAAAGAATCTCTGATAAGGCATTGAGATAATGGATATTCTTAGTGAAGAAGAAGTGAGTTACTATAAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCAAGGAGACGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTTCCTAAGAATATCCATTATCTCAATGCCTTATAAGAGATTCTTTTCCagttcgtaagggcgtcttgaaggggaagg                                                                                                                                                                      >  1:179336/1‑272                                                                                                                                            CTGGAAAAGTAGCCTGAATGTCCAGACAATACCGGAGAAAGGAAAAGAATCTCTGATAAGGCATTGAGATAATGGATATTCTTAGTGAAGAAGAAGTGAGTTACTATAAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCC                                                                                                                                                                                                   <  2:179395/272‑1                                                                                                                                                                                                        GCATTGAGATAATGGATATTCTTAGTGAAGAAGAAGTGAGTTACTATAAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCGCCGGTAGTTTCTGGACATTCATGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGTTTTTATGTTCAGTCATATCCTA                                                                                                           >  2:273405/1‑300                                                                                                                                                                                                                                                       AAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTT                                                                                                                                                                                                     <  1:677882/163‑1                                                                                                                                                                                                                                                       AAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTT                                                                                                                                                                                                     >  2:678094/1‑163                                                                                                                                                                                                                                                                                    CATAAAAAAAGGTGCGCCAGGAGACGCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCCGAGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGTTAAGTAATATACTAAATTCTGCCGGCAATACCTCTTTGATGAATCATGATGTTGTGCAAGACAATAATATAGTAGATCTTGATTTAttct                               >  1:796776/1‑296                                                                                                                                                                                                                                                                                              ccgacgctcttccgatttCCTTTTTTTTTGCTTCCTTCCTGGTATATGAGCGATTTTTTATAGTAACTCCCTTCTTCTTCACTAAAAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCACCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAAT                    <  1:1132799/283‑1                                                                                                                                                                                                                                                                                                  gggatccttgtctatCTTTTTTTTTTCTTAAGTCCTAGGATATTAACGATTTTTTATTGTGACTCATTTCTTCTTCGCTAAGACTATCCAATATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCGTCGGTAGTGTCTGGACCATCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAAGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGG                 <  1:1187268/285‑1                                                                                                                                                                                                                                                                                                   tttttctgtatccCCTGTTTTTATGCTTCCTTCCTTGGATATTAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAAT                          <  1:806832/277‑1                                                                                                                                                                                                                                                                                                          gtCGCACCTTTTTTTATGATTCCTTCCTGGGCTATGTGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATTCATTATCTCAATGCCTTATCAGTGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAG          <  2:129998/297‑1                                                                                                                                                                                                                                                                                                             GCACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTATTTTAAATGTGGTGCCAGGTTTt     >  2:186155/1‑300                                                                                                                                                                                                                                                                                                             GCAACTTTTTGTATTATTCCTTTCTGGGATATGAGAGATTTTTTATAGGAACTCACTTCGTCTTCACTAAGAATAGCCATTATCTCAATGCCATATCAGATATTCTTGTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGAGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTA     <  2:1037851/301‑1                                                                                                                                                                                                                                                                                                              CACCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAAATCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTGTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCTAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTAATATACTAAATTCTGGCGGCAATCACTCTTTGATTAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGTTTTCATCAGTAATCTAAATGGGGTTCCAGGTTTA     >  1:932544/1‑300                                                                                                                                                                                                                                                                                                               ACCTTTTTTTATGCTTTCTTCTTGTGATATTTTCTATTTTTTTTAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTTTCAGAGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAA    <  1:273317/300‑1                                                                                                                                                                                                                                                                                                                CCTTTTTTTATGCTTCCTTTCTGGGATATTAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAAAC  <  1:186096/301‑1                                                                                                                                                                                                                                                                                                                CCTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCACCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTACTTTAAATagatcggaaaaccacacg  >  2:1133098/1‑283                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCCCATTTAAATTACGTAGTAAATCAAGATCTACTATATTATTTCCTTGCACCACATCATGTTTCATCAAAGAGTTATTGCCGCCAGAATTTAGGATATGACTTATCATAAAACCTCTGCATAACAGAAATAAAATAACCTGGAAAAGTAGCCTGAATGTCCAGACACTACCGGCGAAAGGAAAAGAATCTCTGATAAGGCATTGAGATAATGGATATTCTTAGTGAAGAAGAAGTGAGTTACTATAAAAAATCGCTCATATCCCAGGAAGGAAGCATAAAAAAAGGTGCGCCAGGAGACGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/4250811‑4250507 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccTTTTTTTATGCTTCCTTCCTGGGATATGAGCGATTTTTTATAGTAACTCACTTCTTCTTCACTAAGAATATCCATTATCTCAATGCCTTATCAGAGATTCTTTTCCTTTCGCCGGTAGTGTCTGGACATTCAGGCTACTTTTCCAGGTTATTTTATTTCTGTTATGCAGAGGTTTTATGATAAGTCATATCCTAAATTCTGGCGGCAATAACTCTTTGATGAAACATGATGTGGTGCAAGGAAATAATATAGTAGATCTTGATTTACTACGTAATTTAAATGGGGTGCCAGGTTTAAAC  >  NC_000913/4250527‑4250825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.