New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1096961 =58 (0.720)25 (0.420) 8/440 6.8 36.6% intergenic (+132/+604) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913 = 1097503 44 (0.740)intergenic (+674/+62) ycdU/serX putative inner membrane protein/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

GTCGGTATTGGCAACGCTTGTAGAATGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCG  >  NC_000913/1096661‑1097243
                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                            
ttccgatctGGCAACGCTTGTAGAATGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCAc                                                                                                                                                                                                                                                                                              <  2:707335/293‑1 (MQ=255)
     tATTGGCAACGCTTGTAGAATGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCggg                                                                                                                                                                                                                                                                                         >  1:407752/1‑300 (MQ=255)
         ggCAACGCTTGTAGAATGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCAcagatcggaa                                                                                                                                                                                                                                                                                     >  1:707331/1‑292 (MQ=255)
                        aTGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTAAATCAGTGAGGAA‑GAGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGTACGATTTCCCCTCGCCATAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaa                                                                                                                                                                                                                                                                      >  2:69211/1‑301 (MQ=255)
                          ggCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGaaaaaaa                                                                                                                                                                                                                                                                    >  2:553023/1‑301 (MQ=255)
                             ggATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAg                                                                                                                                                                                                                                                                  <  2:845975/300‑1 (MQ=255)
                              gATTTGGTTTGAAGCCTATTTTTTACGCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGc                                                                                                                                                                                                                                                                 <  2:343760/300‑1 (MQ=255)
                               acgctcttccgatcttATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGcc                                                                                                                                                                                                                                                                <  1:642182/285‑1 (MQ=255)
                                tttGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCCTTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATCATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGTGGGCACCCGGTGTGTGCAATATACGAAAAACAAGcca                                                                                                                                                                                                                                                               >  1:434053/1‑299 (MQ=255)
                                  tGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTa                                                                                                                                                                                                                                                            <  2:578961/301‑1 (MQ=255)
                                          aGCCTATTCTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCTATTTCTCTGGCATAACGATTTTATGATGGCATGTGATATGTATTTCCGTTGGGGGCATTTTACTAAGTGAGGAA‑GTGATAGTAAGTGACCCGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGATTAAGCAGACAGTTCATGTGTACGATTTCTCCTCGCCCTAACCGCCGTGGGCGGGGGCACCCGGTGTGTGCAATATACGACAAAAAAGCCCTTACTTCCGtt                                                                                                                                                                                                                                                    >  1:41356/1‑300 (MQ=255)
                                            ccTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTAc                                                                                                                                                                                                                                                   <  1:534168/300‑1 (MQ=255)
                                              tATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGccagatcggaagagcaca                                                                                                                                                                                                                                                >  2:642186/1‑285 (MQ=255)
                                               ttttgttACTCTGCTATTTACCGTGGTTAATTTACTATTTTTGCGATTGTGAATTCCTCTAGCATAAGGATTTTATGATGGCATGTGACATATATTTCGGTTAGGAGCATTTTAATAAGTGAGGAA‑GTAGTAGGGAGTGACCAGATAATACATATATGTTCTGTACTGTCTTGCTCATTTTGGTTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCGCGCCCTAACAGACATGGGAGGGGGCACCCGGGGTGTGCAATGTACGAAAAAAAAGCCCGTACTTTCGTACGAGc                                                                                                                                                                                                                                               <  1:456640/300‑1 (MQ=255)
                                                  ttttACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTTGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGct                                                                                                                                                                                                                                              >  1:854426/1‑299 (MQ=255)
                                                      cctctGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTTGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTcttctt                                                                                                                                                                                                                                        <  2:854433/300‑1 (MQ=255)
                                                                  cccGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGTCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCgg                                                                                                                                                                                                                            <  2:407755/300‑1 (MQ=255)
                                                                                aCTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTg                                                                                                                                                                                                              <  2:737839/301‑1 (MQ=255)
                                                                                        ttCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATTTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt                                                                                                                                                                                                      <  1:229919/301‑1 (MQ=255)
                                                                                                      ccTCTGGCATACCGATTTTATGATGGCATGTGACATGTATTTCCGCTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGACAAAAAAGCCCGTACTTTCGTACTAGCTCTTCTTTAACTCTGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCg                                                                                                                                                                                        >  1:198775/1‑300 (MQ=255)
                                                                                                           ggCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAg                                                                                                                                                                                   >  1:785429/1‑300 (MQ=255)
                                                                                                                 aCGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCt                                                                                                                                                                             >  1:210815/1‑300 (MQ=255)
                                                                                                                            tggagttcagacgtgtgctcttccgatctgCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGGTTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCAc                                                                                                                                                                 <  2:123618/272‑1 (MQ=37)
                                                                                                                                    tgACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGTGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGt                                                                                                                                                              >  2:267919/1‑296 (MQ=255)
                                                                                                                                           tATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTgg                                                                                                                                                  <  2:210818/301‑1 (MQ=255)
                                                                                                                                            aTTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc                                                                                                                                                 <  2:195993/301‑1 (MQ=255)
                                                                                                                                             tttCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCACGTACTATCGTAGGAGCGCTTCTTTAAATATGGCGGTGAGGGGGGGATGGATGCGCTTCGCTCCCC‑CTGCGGGGAGCACGCTCACTGCGTTAACGTTCTGTCCTACtcg                                                                                                                                                  >  1:295126/1‑297 (MQ=255)
                                                                                                                                                   ttGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGTGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGcc                                                                                                                                          <  1:267916/301‑1 (MQ=255)
                                                                                                                                                      ggggCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCACTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAg                                                                                                                                        <  2:198778/300‑1 (MQ=255)
                                                                                                                                                         gCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGGTTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCAcagatcggaagagcgtcgtgtagggaaaga                                                                                                                                    >  1:123616/1‑272 (MQ=37)
                                                                                                                                                           aTTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGTAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCg                                                                                                                                  <  1:487523/301‑1 (MQ=255)
                                                                                                                                                            ttttTATAAGTGAGGAAGGTGA‑ATGAAGTGACAAGATAATGCATTTATGTTCTGTAATCTCGTGCGCATTTTGGTTGTTGACTGAGTAGCCAGGCAGTTGGTGTGTACGATTTCCCCTCGCCCTAACATACTTGGGCGGGGGCACCCGGTGTGTGCAATATACGTAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CGGCGGGCAGCCCGCTCGCTGCGTTCACGGGCTGTCCAACTGGCGACAGCCAGTTggaca                                                                                                                                 <  1:69210/301‑5 (MQ=18)
                                                                                                                                                                            a‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCACGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑ACCCCGGTCCGGGCtt                                                                                                                >  1:56969/1‑301 (MQ=255)
                                                                                                                                                                                            ccAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAGCCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑ACCCCGGTCGGGGCTTCTCATCCCCCCGgtg                                                                                                 <  2:785434/301‑1 (MQ=255)
                                                                                                                                                                                              aGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTTGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCAAGATGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGgttag                                                                                               >  1:349843/1‑298 (MQ=255)
                                                                                                                                                                                                   ataCATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCACCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAGTCGGTTCGCTCGCC‑ATGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTTTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCTCGGGTTGTGCaa                                                                                          >  2:608208/1‑301 (MQ=255)
                                                                                                                                                                                                     aacgtgggctcttccgatctctTGCGCATTTTGTTTGTTGACTGGGTAACCAAACAGTTGATGTGTACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTTTGAAATATACGAAAAAAAAGCCAGTCCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTTAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATa                                                                                        <  2:433127/284‑1 (MQ=18)
                                                                                                                                                                                                        tatatGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCACTaca                                                                                      >  2:636263/1‑300 (MQ=255)
                                                                                                                                                                                                             gTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaaa                                                                                >  2:31703/1‑301 (MQ=255)
                                                                                                                                                                                                                 tGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCCGGTCGGGGCTTCTCATCCCCCTGGTGTGTGCCATCCCCGaaaaaaa                                                                             >  1:145929/1‑301 (MQ=255)
                                                                                                                                                                                                                   tACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGAAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAg                                                                           <  2:434056/300‑1 (MQ=255)
                                                                                                                                                                                                                     ctctctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCCCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTGGA‑CCCCCGGTCGGGGCTTCGTACCCCCCCGGTTTGTGCCATACACGTCACAAAAGcc                                                                         >  1:229068/1‑300 (MQ=255)
                                                                                                                                                                                                                         ctTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACTAGCACTTTTTCAAATATGGCGGAGAGGGGGGGACTGACACGCTTCGCTAGCC‑CTGCGGGCAGCCCCGTCACTGCGGTTACGGGCGTTCTAACTGGCTGTCGCCAGGTGTCGA‑CCCACGGTCGGGGCTTCCCATCCCCCCGGTGTGTGCAATaagatcggaaacgcgtcgggt                                                                    >  1:433124/1‑281 (MQ=18)
                                                                                                                                                                                                                            gcgcATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTTACTGCGTTCACGGTCTGTCCAACTGGCGGTCGCCAGTTGTCGA‑ACCCCTGTCGTGGCTTCCCATCCCCCCGGCGTGTGCAATACACGAAAAAAACGCCCGCACttt                                                                 >  2:382775/1‑301 (MQ=255)
                                                                                                                                                                                                                               cATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGCCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCCCATCCCCACGGTGTGTGTAATTCACGAAAAAAATGTCTGTATTTTTGt                                                              >  1:516057/1‑301 (MQ=255)
                                                                                                                                                                                                                                   ttGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGACCCCCCGGTCGGGGCTTCTCATCCCCCTGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACg                                                           <  2:145931/301‑1 (MQ=255)
                                                                                                                                                                                                                                      atggttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCACTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGGGTGCAATATACGAAAAAAAAGACCGTACTTTCGTACGAGCTCGTCTTTAAATAGGGCGGTGAGGGGGGGATTGACTCGCTTCGCACGCC‑CGGCGGGCAGCCCGCTCACTGCGTTCACGGGCTGTCCAACTGGCTGTCGCCAGTTGCCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGc                                                        <  1:574413/297‑1 (MQ=255)
                                                                                                                                                                                                                                         gttgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCCCGCC‑CTGCCGGCAGCCCGCTCACTGCGTTCACGGTTTGTCCAACTGGCTGTCTCCAGTTGTCCA‑ACCCCCGTCGGGGCTTCTCATCCTCCCGGTGTGTGCATTACACTCAAACTACGCTCGTACTTTTGTACGAGCtctt                                                    >  1:222455/1‑301 (MQ=17)
                                                                                                                                                                                                                                                          tccaatcgtgtgCACGATATCCCCTCGCCCTAACAGACGGGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCATTAAATAAGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAACCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGACGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTg                                   <  2:433339/293‑1 (MQ=255)
                                                                                                                                                                                                                                                             gTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGCGCTATTCTTTAAATATGGCTGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGTAGCCCGCTCAATGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGACGGGGCTTCTCATCCCCCCGGTGGGGGCAACACACGACAAAAAAGCTCTGCCTTTCGtcctctcacatgtgtaatgatgggggtgagg                                >  1:817742/1‑271 (MQ=17)
                                                                                                                                                                                                                                                                  tgtgCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGTTTCGCTCGCC‑CTGCGGGCAGGCCGCCCACTGCGCTGACGGTCTGTCCAATTGGCCGTACCCAGGTGTCGA‑CTCCCGGACGGGGCTTCTCATTCCCCCGGTGGGTGTAATACACGAAAAAAAAGCCCGTACTTTCGTACTAGCCTTTCCTTAATTATggacgggttgtagga                           >  1:433336/1‑288 (MQ=17)
                                                                                                                                                                                                                                                                          ttttcccccgagccaaaCAGACGAGGACGGGGGAACCAAGAGAGTGAAATATACGAAAACAAAGCTCATACTTACGTACGCGATCTTCTTTAATTATGGCGGTGACGGGGGGATTGCCTCGCTCCATTCGCCTCTG‑GGACAGCTGGTTAATTGCGTACTCGGTCTGTACGGCTGGCGGTCGCAAGTTGTCGA‑CCCCGGGAGGGGGGTTCGCAGGCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtc                   <  1:382772/286‑1 (MQ=2)
                                                                                                                                                                                                                                                                            tttctcttccgatctaagactggggCGGGGGCACCCGTTTTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgc                 <  2:65792/279‑1 (MQ=255)
                                                                                                                                                                                                                                                                            ttCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcg                  >  2:149863/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                              cccccgcccacgtctgttagggcgaggggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgctt               >  2:356917/26‑301 (MQ=255)
                                                                                                                                                                                                                                                                                    ccccTAAAAGACGTGGGAGGGGGCACCCGGTGTGTGCAATTAAAGAAAAAAAAGCCCGTACTGTCGGACGAGCTCTTCTTTACATATGGCGGGGAGGGGGGGTTTGATTCGCTCCGCTCGCC‑CTTCGGGAAGCCCGCTCACTGCGGTCAAGGTATGTCCAAGTGGCTGTCGCCAGCTGTCGA‑CCCCCGGTCGGGGGTTCTCAGCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg         <  1:636259/300‑1 (MQ=14)
                                                                                                                                                                                                                                                                                     cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAATAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg         >  2:647462/1‑300 (MQ=255)
                                                                                                                                                                                                                                                                                           cAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTGCGCTGGCC‑CGGCGGGCAGCGCGCACAAGGGGTTCAAGGTCTGTCCAACTGGCGGTCGCGAGTTGTCGA‑CCCACGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGAGTGACtcgcagataggaagcgggg  >  1:65791/1‑286 (MQ=14)
                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                            
GTCGGTATTGGCAACGCTTGTAGAATGGCGGATTTGGTTTGAAGCCTATTTTTTACTCTGCTATGTACCGTGCTTAATTTACTATTTTTTCTATTGTCGATTCCTCTGGCATAACGATTTTATGATGGCATGTGACATGTATTTCCGTTGGGGGCATTTTAATAAGTGAGGAA‑GTGATAGGAAGTGACCAGATAATACATATATGTTCTGTACTCTCTTGCGCATTTTGATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCC‑CTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGA‑CCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCG  >  NC_000913/1096661‑1097243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.