Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0009133,185,3380T→G100.0% 0.9 1intergenic (+208/‑76)yqiC/ygiLBMFP family putative fusogenic protein/putative fimbrial‑like adhesin protein
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/1):  ref base (0/0):  total (0/1)

CAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCAACGCTGTAAACATTCGTCTTTAATGCACTGTAAATTATGAATTAATCCTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTACTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAAC  >  NC_000913/3185076‑3185546
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                
cAGTACTGAGATCAAAAATCAGCCAGATCATGAGAATCTCCCCCCAACGCGGTAAACATACGTCTTTAATGCACTGTAAATTATGAATTAATCCTCTAATCTATAGTGCTTTCTATTACCTTATCCCGTAATCCCATTCAGAAAACCATCACAAAAATGAATCAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAAGCGATATTGAGATAAACTAACTTTATAAAAAACACAAAATAAAATATCATTGTTCGATGATTAGTAGTCCTTAAATAACAGTTACTAAt                                                                                                                                                                             <  1:780715/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tttCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTACTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAAc  <  1:979791/209‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tttCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTACTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAAc  >  2:979754/1‑209 (MQ=255)
                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                
CAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCAACGCTGTAAACATTCGTCTTTAATGCACTGTAAATTATGAATTAATCCTCTAATTTATAGTGCTTTCTATTACCTTATCGCGTAATCCCATTCAGAAAACCATCACAAAAATGAATGAGTACAATTGAAAGTATAATTGCAATGTATTTTTTAAGTTTTACTTAATCGATATTTAGATAAACTAATTTTATAAAAAACACAAAATAAAATATCATATTTCAATGATTAGTAGTCCTTAAATAACAGTTACTAATCATTCTCTTTTCTACTTATCTTTATATAAAGGAATATTATGTCCGCTTTTAAAAAGTCACTTCTTGTTGCTGGCGTAGCAATGATTCTTTCCAATAACGTGTTTGCTGATGAAGGTCACGGTATTGTTAAATTTAAAGGTGAAGTTATCTCTGCTCCATGTTCTATTAAAC  >  NC_000913/3185076‑3185546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.