| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4477269 | 198 (1.160) | 6 (0.040) | 6/552 | 20.8 | 3.0% | intergenic (+18/+38) | yjgL/argI | SopA‑central‑domain‑like hexapeptide repeat protein/ornithine carbamoyltransferase 1 |
| ? | NC_000913 | = 4477280 | 191 (1.160) | intergenic (+29/+27) | yjgL/argI | SopA‑central‑domain‑like hexapeptide repeat protein/ornithine carbamoyltransferase 1 | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
AGAGTTATGAGGGTGAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4476962‑4477269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccgggaAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTCAGTTTTTCTTTGATAACATTATCTGGTTGATTCTTCAAAATTTCTTTATTAGATTCCTTATCATTATCATTTAAATCA‑TATTTTAAATTATCAAAATAAATC < NC_000913/4477280‑4476981 AGAGTTATGAGGGTGAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTTAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT < 1:910619/301‑1AGAGTTATGAGGGTGAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT < 1:942844/301‑1 TATGAGGGTGAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACAAGATAATGTTATCAAAGCAAAACTGAATAATGAATACAAACTTAGCTTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATCTTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTAAGTATAGAAATAGAACAATTTGGGTGCAAGAATAGACATATCACTACATAAAAAACTGTGATGCAGG > 2:1374304/1‑301 tcctatcttAAAAGATTTATTTTGATAATTTAAAATATGAATTAAAAGATAAAGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGAT < 2:1132801/286‑1 GAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACAAAATCAACCGGAAAATTTACGTATAGCAATAGCACACTTTGGGTGGAATAATATACCTATAACGGCATAAAATAATGTGATagatcgcatgagc > 1:1133105/1‑287 ATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGAAATACAAACCATCCCGGCATCACATTATTTTAT < 1:941022/251‑1 ATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGAAATAAAAACCATCCCGACATCACATTATTTTAT > 2:940768/1‑251 GTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGAAATACAAACCATCCAGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGAT > 1:1266346/1‑301 aatAAAGAAAAACAGAATAATAAATACAAACTTATATTTAAAATTATGCAAACTAACTTGCAATCGATAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTA < 2:1266009/298‑1 CTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCAC > 1:199336/1‑246 CTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCAC < 2:199297/246‑1 atccgatctAAATACAATCCCTCCCGGCATTACATTATTTTATGCATTGATAGGTCTATTCTTCCACGCAAAGTGTTCTATGGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATTGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAATTTTGTATTCATTATTCAGTTTTTCTTTGATAACATTATCTGGTTGATTCTTCAAAATTTCTTTATTAGATTCCTTATCATTATCATTTAAATCA‑TATTTTAAATTATC < 2:1177362/291‑1 GCCGGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTAAGTTTTTCTTTGATAACATTATCTGGTTGATTTTTCAAAATTTTTTTATTAGTTTCCTTATCATTATCATTTAAATCA‑TATTTTAAATTATCAAA > 2:874411/1‑300 CCGGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTCAGTTTTTCTTTGATAACATTATCTGGTTGATTCTTCAAAATTTCTTTATTAGATTCCTTATCATTATCATTTAATTAA‑TAagatcggaatagcgtct > 2:546377/1‑284 CCGGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGGGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTCAGTTTTTCTTTGATAACATTATCTGGTTGATTCTTCAAAATTTCTTTATTAGATTCCTTATCATTATCATTTAAATCA‑TA < 1:546515/284‑1 CCGGGAAATACAAACCATCCCGGCAACACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTCAGTTTTTCTTTGATAACATTATCTGTTTGTTTCTTTAAAATTTCTTTATTAGATTTCTTATCATTATCATTTAAATCA‑TATTTTAAATTATCAAAAT > 2:1536487/1‑301 GGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCCTTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTACGTTTGTATTCTTTTTTCATCTTTTCTTTGATAAAATTATCTGGTTGATTCTTCTATATTTCTTTATTTGATTACTTTTATTTAT‑ATTTTAATGATTATTTTAATTTTTCgtatta > 2:536373/1‑294 GGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTCAGTTTTTCTTTGATAACATTATCTGGTTGATTCTTCAAAATTTCTTTATTAGTTTCTTTATCATTATCATTTAAATTA‑TATTTTAATTTATAAAAATA > 2:1366771/1‑300 GGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCG < 1:527126/152‑1 GGGAAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCG > 2:526994/1‑152 AAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCTGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTCAGTTTTTCTTTTATAACTTTCTCTGGTTGATTCTTCAAAATTTCTTTATTATATTCCTTATCATTATCATTTAAATCA‑TATTTTAAATTATCAgttcggaat > 1:1177677/1‑292 AGAGTTATGAGGGTGAAAAGATTTATTTTGATAATTTAAAATATGATTTAAATGATAATGATAAGGAATCTAATAAAGAAATTTTGAAGAATCAACCAGATAATGTTATCAAAGAAAAACTGAATAATGAATACAAACTTAGATTTAGAATGATGCAAACTATCTTGCAATCGAGAGTTAATGTATTACCATATATTAATGAACAGCGTTTAAATAAACTAAATCCACCGGAAAATTTACGTATAGCAATAGAACACTTTGGGTGGAAGAATAGACCTATCACTGCATAAAATAATGTGATGCCGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4476962‑4477269‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccgggaAATACAAACCATCCCGGCATCACATTATTTTATGCAGTGATAGGTCTATTCTTCCACCCAAAGTGTTCTATTGCTATACGTAAATTTTCCGGTGGATTTAGTTTATTTAAACGCTGTTCATTAATATATGGTAATACATTAACTCTCGATTGCAAGATAGTTTGCATCATTCTAAATCTAAGTTTGTATTCATTATTCAGTTTTTCTTTGATAACATTATCTGGTTGATTCTTCAAAATTTCTTTATTAGATTCCTTATCATTATCATTTAAATCA‑TATTTTAAATTATCAAAATAAATC < NC_000913/4477280‑4476981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |