Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_000913 | 686,077 | 0 | G→C | 21.5% | 10.3 ‑1.9 ‑0.0 | 121 | A198G (GCG→GGG) | gltJ | glutamate/aspartate ABC transporter permease |
Reads supporting (aligned to +/- strand): new base (21/5): ref base (87/8): total (108/13) | ||||||||||
Fisher's exact test strand distribution p-value = 1.50e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.81e-01 |
Only 100 of 130 total aligned reads displayed.
CACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCA > NC_000913/685834‑686326 | tCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCg < 1:1592666/212‑1 (MQ=255) tCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCg < 2:2547185/212‑1 (MQ=255) aGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACAAACGCCAGCGTAATGGCGGGAAAAAAACCCCCAGGCATGGGTGGA‑GAAAAGGAGAAATTTACCCCCCGGGGCGGCCAAATCCACCAAACCGAAAG‑CGAggggggaggggggggttttct > 2:2461946/1‑231 (MQ=255) gATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCCGGCAGGCGAACTTTACGGTCAACCCGCGTCCTCACCAGCATGATAAAAGCGTTAATCAACACCTAAGCCAGCGGAATTGC‑GGGAAAAAACCCCCCCCCCAGGGCGGAGGTAATAGACAAATTTACCCCCCCCGGCGCCCATAT‑CACCACACCCCAAGTCGTGGCGGCGGCggggggtttttaca > 1:1730146/1‑239 (MQ=255) gATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCg < 2:3135883/194‑1 (MQ=255) gCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAAACTCCCCCGCATGGGCGGA‑GTAAACGAGCAATTTACCCg > 2:4034492/1‑188 (MQ=255) gggaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCg < 2:5041992/185‑1 (MQ=255) ggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCAAGGGCTGA‑GTAATCGAGCAAATTAACCCCCCGCGCCGCCCTATCCACCCGCCCGACAGTCGAGGCGCTGGCGGGGGTTTTCACCAGGTTCATCAtctccg > 2:411988/1‑249 (MQ=255) ggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACCCCCCAGCATGGGCTGA‑GAAATCGCGCCATTTACCCGCCCGCCCCCCCACATCCACCAGACCGATAGTCGAGGCGCAGGCGGAGGTTTTCCCCTGGGtcatccacc > 1:5963084/1‑244 (MQ=255) ggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACAACCCCCAGGCATGGGCTGA‑GTAATCGAGCAAATTACCCGCCTGCGCCGCCCTATCCACCAGACCGATAGTCGAGGCGATGGCGGGGGTTTTCACCAGGGtcatcaa > 1:1179393/1‑245 (MQ=255) aGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACCCCCCGGCATGGGCGGA‑GTAATCGAGCAAATTACCCCCCTGCGCCGCCCCATCCACCAGACCGATAGACGAGGGGATGGCGGGGGTTTTCACCCGAGTTATCAtctc > 2:4816166/1‑234 (MQ=255) aGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACTCCCAGGCATGGGCTTG‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATACACCCGACCGATAGTCGAGGGGATGGCGGGGTTTTTCTCCCCGTTCTTCATCTCTGCGGTCATCGGAgggg > 2:3836338/1‑250 (MQ=255) gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCCAGCATGGGCTGA‑GTAAACGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGAAAGGCGAGGGGATGGCGGAGGTTTTCCCCAGGTTCCTCATCCCTGCGGTCATCGGCcgggg > 1:3066954/1‑249 (MQ=255) gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACTCCCCGGCATGGGCCGA‑GTAATTGAGCAATTTACCCCCCCGCGCCGCCCTATCCACCAGACCGATAGGCGAGGCGATGGCGGAGGTTTTTACCAGGTTCatcatc > 2:121651/1‑231 (MQ=255) gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACCCCCAGGCATGGGCTGA‑GGAAACGAGCAATTTAACCGCCTGCGCCGCCCTAAccacc > 2:2815132/1‑183 (MQ=255) aaCTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACCACTCCCCGGCCTTGGCTGA‑GTAAACGGGCAAATTACCCCCCTGCGCCGCCATATCCCCCCGACCGAAAATCCAGGCGATGGCGGAGGTTTTCACCCGGTTCATCATCTCCGAgg > 1:3599147/1‑234 (MQ=255) aaCTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACTCCCAGGCATGGGCTGA‑GTAAACAAACAATTTACCCCCCTGCGCCGCCATAACCACCAGACCGGTAGTCGAGGCGATGGCGGGGGTTTTCAACCGGTTCCTCATCTCTGCAGGCATCGGCgggggggga > 2:1147435/1‑245 (MQ=255) aaCTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGAATCCCAAGCAAGGGCTGA‑GGAAACGAGGAAATTAACCGCCTGCGCCGCCATAACCACCAGAACGATAGTCGAGGGGAAGGCGGGGGTTTTCaa > 2:2070429/1‑213 (MQ=255) cTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGAATCCCAGGCATGGGCTGA‑GTAATCGGGGAAATTACCCCCCTGCGCCGCCCAATCCCCCAAACCGATAGTCGAGGCGATGGCGGGGGTTTTTACCCGGGTCATCATCTCTGAGGTCATCTGCggggggggaaa > 2:3383874/1‑243 (MQ=255) cATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCCGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCCTATCCACCAGACCGGTAGTCGAGGCGATGGCGGGGTTTTTCCCCAGGTTCCTCATCTCTGAGGTCACAGGCGGGGCGGTAACCCGGTa > 1:3375274/1‑251 (MQ=255) cATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACCACTCCCCAGCCTGGGCTGA‑GGAAACGAGCAATTTACCCGCCCGCGCCGCCCTATCCACCAGACCGATAGTCGAGGCGCTGGGGGGGGTTTTCACCAGGGTCATCATCTCTGTGGGCATCGGCgggggcgtgaacgtct > 2:1168114/1‑237 (MQ=255) ttattTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGAACCCCAAGCATGGGGTGA‑GGAAACGGACAATTTACCCGCCCGCCCCCCCACCTCCACCAGACCGCTAGTCGGGGGGATGGCGGGGGTTTTCACCCAGGTCAACATCTCTGAGGTGATTGGCggggagagaaagacgaaaa > 1:4492469/1‑235 (MQ=255) ttGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCACGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCCCATCCACCAGACCGATAGTCGAGGGGATGGCGGGGGTTTTCACCAGGTTCATCCTCTCTCAGGGCATCCGCggggggcggacaccgcaaaactt > 2:2694658/1‑231 (MQ=255) ccccccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGAATCCCCCGCATGGGCTGA‑GGAATCGAGCAAATTACCCCCCTGCGCCCCCACATCCACCAAACCCATAATCGGGGGGATCGCGGCGTTCTTCACCAGGTTCctcctcccctcgggcacc > 1:3639699/1‑210 (MQ=255) ccccccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGAATCCCAGGCATGGGCCGA‑GTAATCGAGCAATTTTCCCGCCTGCGCCGCCCTATCCACCCAACCGAAAGTCCAGGCGATGGCGGGGGTTTTTCCCCGGTTCATCATTCCCTAAGTCATCGGCggggggggtcaacgcgcaaacaatag > 2:2741041/1‑228 (MQ=255) cccccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACCCCCCGGCCTGGGCTGA‑GTAATCGAGCAATTTTCCCGCCTGCGCCGCCATATCCACCAGACCGCTAGTCGAGGCGGTGGCGGAGGTTTTTACCCAGTTCATCCTCCCTTAGGGCAACCGCgggggggaaaactcgcaaaccca > 2:5742890/1‑227 (MQ=255) gTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGAATCCCAGGCATGGGCTGA‑GGAATCGAGCAAATTACCCGCCTGCGCCGCCCTATCCACCAGACCGAAAGTCGAGGGGATGGCGGGGGTTTTCACCAGGGTCATCATCTCTGAgg > 1:3018312/1‑209 (MQ=255) aaCTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAAGCCTGGGCTGA‑GTAATCGAGCAAATTACCCCCCCGCGCCCCCCTATccacc > 1:4877895/1‑139 (MQ=255) aCTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCCGCGCCGCCa > 1:1080934/1‑130 (MQ=255) aCTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAAGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCCGCGCCGCCATATCCACCCAACCGATAGTCGAGGCGATGGCGGAGTTTTTTACCAGGGTCATCATCTCTTAgg > 1:4661402/1‑193 (MQ=255) aCTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACTCCCAAGCATGGGCTGA‑GTAAACGAGCAAATTAACCCCCCGCGCCGCCATATCCACCAGACCGATAGTCGAGGCg > 1:317935/1‑156 (MQ=255) cTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACCAATCCCAGGCATGGGCCGA‑GGAATCCGGCAAATTTCCCGCCCTCgcccccccattc > 1:5324537/1‑128 (MQ=255) cAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAAACGAGCAATTTAACCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGGGGTTTTTACCAGGGTCATCCtctc > 1:3089096/1‑178 (MQ=255) gTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCCCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGGGGTTTTCACCAGGTTCATCATCTCTGAgg > 1:4026012/1‑175 (MQ=255) atcaCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGCGCAATTTACCCGCCTGCGCCGCCATATCCCCCAGACCGATAGTCGAGGCGATGGCGGGGGTTTTTACCAGGTTCATCATCTCTGAGGTCATCCGCGGGGCGAGaaaac > 1:5355265/1‑190 (MQ=255) tcaCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAAATTACCCGCCTGCGCCGCCAAATCCACCAGAc > 1:1406324/1‑120 (MQ=255) caCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACCACCCCCAGGCATTGGCTGC‑GTAATCCAGCAATTTTCCCCCCCCCGCCCCCATATccccc > 1:4382119/1‑115 (MQ=255) aGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGGAAACGACTCCCCGGCATGGGCTGA‑GGAATCGAGCAATTTACCCGCCTGCGCCGCCCTATCCACCAGACCGATAGTCGAGGCGATGGCGGGGGTTTTTACCAGGTTcatcat > 2:2361638/1‑158 (MQ=255) cATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGAACCCCAGGCAAGGGCTGA‑GGAAACGAGCAAATTACCCGCCTGCGCCGCCAAATCCACCAGACCGATAGGCGAGGCGGTGGCGGGGGTTTTCACCAGGGTCATCATCTCTGAgg > 2:1127259/1‑164 (MQ=255) tGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCg < 1:743277/87‑1 (MQ=255) tGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GGAATCGAGCAATTTAACCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGGGATGGGGGGGGTTTTTACCAGGGTCATCAactc > 1:3235650/1‑157 (MQ=255) tGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACTCCCAGGCATGGGCTGA‑GGAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGGGATGGCGGGGGTTTTc > 1:3668566/1‑140 (MQ=255) tGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACCCCCACGCATGGGCTGA‑GGAATCGAGCAATTTACCCg > 2:743126/1‑87 (MQ=255) gCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAAAGACTCCCAAGCATGGGCTGA‑GTAATCGAGCAATTTAACCGCCCGCGCCGCCATATCCACCAGACCGATAGTCGAGGGGATGGGGGGGGTTTTCAcc > 2:383216/1‑135 (MQ=255) aaTCAACACATACGCCAGCGTAATGGC‑GGTAAACGACCCCCAGGCATGGGCTGA‑GTAAACGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGGGGTTTTCACCAGGTTCATCATCTCTGAGGGCATCGGCGGGGCGGAAAAGCCATaaagaataaggcc > 1:1270285/1‑175 (MQ=255) aaTCAACACATACGCCAGCGTAATGGC‑GGTAAAAGAATCCCAAGCAAGGGGTGA‑GGAAACGAGCAAATTACCCCCCTGCGCCGCCAAATCCACCAAAACGATAGGCGAGGCGGAGGCGGAGTTTTTCACCCGGGTCATCATCTCTGAgg > 1:2745786/1‑149 (MQ=255) acacATCCGCAAGGGTAAGGGG‑GGAAACCGCCCCCCAGGAAGGGGCTGA‑GAAATCGAGCATTTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAgg < 1:4549108/144‑1 (MQ=255) acacATACGCCAGCGTAATGGC‑GGTAAACGACTCCCCGGCATGGGCTGA‑GGAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGGGGGGTTTTTCACCCGGGTCATCATCTCTGAgg > 2:5876289/1‑144 (MQ=255) acacATACGCCAGCGTAATGGC‑GGTAAACGACCCCCCGGCATGGGCCGA‑GTAATCGAGCAATTTTCCCGCCCGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGGGTTTTTTACCAGGTTCATCATCTCTGAgg > 2:4548317/1‑144 (MQ=255) acaTACGCCAGCGTAATGGC‑GGTAAACGACTCCCCGGCATGGGCTTA‑GTAAACCAGCAATTTACCCCCCTGCCCCCCCCTATCCACCCGAc > 1:282870/1‑91 (MQ=255) acaTACGCCAGCGTAATGGC‑GGTAAACGACTCCCACGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGt > 2:424232/1‑98 (MQ=255) cGCCAGCGTAATGGC‑GGTAAACGAATCCCAGGCATGGGCTGA‑GGAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGGTGGGGGGGGTTTTCACCAGGGTCATCATCTCTGAgg > 2:728923/1‑137 (MQ=255) cGCCAGCGTAATGGC‑GGTAAAAGACTCCCAGGGATGGGGTGA‑GTAAACGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGAcc > 2:3610676/1‑87 (MQ=255) gCGTAATGGC‑GGTAAAAAACTCCCAGGCATGGGGTGA‑GGAAACGAGCAATTTAACCCCCCGCGCCGCCCTATTCACCAGAACGATAATCGAGGCGATGGGGGGGGTTTTTACCAGGTTCATCATCTCTGAgg > 2:1961009/1‑132 (MQ=255) gC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGGTAAAGCGAGAAACATTTGGGCACCGGACGTATTGATAAGGCCGCggg > 2:1425564/1‑185 (MQ=255) gC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGATAAAACGGTAAACACTATGGAGCAGGACCCATCCGTAAACCCGCCGGCGC‑GGCAGGGCCCTCCCCCACGC‑GGGGTTTTTTTTCCCCCCCGGCCGCCACCGGAATCccggcc > 1:678036/1‑249 (MQ=255) cGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg > 2:570409/1‑123 (MQ=255) cGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGGGATAAAGCGCTAAGGCTTAggg > 2:338502/1‑150 (MQ=255) cGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGTAACGCGCTAAGCATTAAGCAGCAGTACGCATCCCAAAACCCGCCGGGGC‑GTCTGGCCCCCCGCCAGCGC‑GGCAATTTTTTTTCCTCCCGGCAGCGC‑CTGGAACCCGGcgc‑gcgcc > 1:1994885/1‑243 (MQ=255) aCTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGTAAAGCGATAAGGAATAGGCAGCCGTACGTATCGATAAACCCGCGGGAAC‑GTCCGGCCCCACGCCAGCGCGGGCGTTTTTTTTCCC‑CCCGGGCGCGA‑CAGAATCTCGGCGC‑GCACCCGTTc > 2:5770558/1‑250 (MQ=255) cTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTcatcat > 1:4016504/1‑105 (MQ=255) cTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAgg > 1:1687539/1‑113 (MQ=255) cTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAgg > 2:189640/1‑113 (MQ=255) cTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAgg > 1:13654/1‑113 (MQ=255) cTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGTAACGCGATAAg > 2:5670328/1‑140 (MQ=255) tCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCg > 2:2448942/1‑75 (MQ=255) tCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGGAAAAGCGGTAAGCAATAAGGAGGAGGACGGATCCATAAACCTGCGGGAGC‑GGCCGGCCCACCGCCAGCGC‑GGCCATTTTTTTCCCTCGCCGCGGGGG‑CTGAATAGCGGCGC‑GGACCCGTTTGCa > 1:1186196/1‑251 (MQ=255) tCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGATAAAGCGATAAGCATTTGGCCGCAGGACGTATCGAAAAACCTCCGGGGGG‑GGTCGGCCCCTCCCCCACGCGGGCATTTTTTTTCCC‑CCCGGGCGCGG‑CTGAATCGGCGCGC‑GGACCGGTTTGc > 2:5884614/1‑250 (MQ=255) tCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAt > 2:1933210/1‑128 (MQ=255) cccAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGATAAAGCGGTAAGCATTaaggcgcagcac > 1:298228/1‑143 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCg > 1:3217682/1‑65 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctc > 1:3856093/1‑102 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAgg > 1:3562001/1‑107 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAgg > 1:3658628/1‑107 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAgg > 2:5824652/1‑107 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGt > 1:562019/1‑108 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg > 2:4460428/1‑114 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg > 1:5532621/1‑114 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGGAAAAGCGATAAAGATTAAgc > 2:1962783/1‑142 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGATAAAGCGATAAGc > 2:982691/1‑135 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGAAAAAGCGATAAACATTAGgcagc > 1:619867/1‑145 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGTAAAGCGATAAACATTAggg > 1:4236422/1‑141 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAACAATAAGCAGCCGTACGTATCGATAAACCTGCGGTAGC‑GTCCGGGCCATCGCCAGCGC‑GGCATTTTTTTTCCCTCCCCGCAGCGC‑CTGAATCGCGGCGC‑GGAACTCTTCGCCAaca > 1:3998755/1‑250 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAAAGCGGTAAGCAATAGgc > 1:1089121/1‑142 (MQ=255) ggCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAAAGCGATAAGCATTAGGgagcag > 1:74014/1‑147 (MQ=255) ggataaataagagagcttctcccccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGggcg < 2:1800104/228‑1 (MQ=255) gA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAGAAAGCGATAAGAGTTAAGCAGCAGTAAGTATCGAGAAGcc > 2:4165409/1‑153 (MQ=255) tgtcgatatatccgcccGCGTCCGCCGCCATAGCCACCAGACCGATAGTCGAGGCGAGGGCGGAGTGTTTCACGAGGTTCATCATCTCGGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGAAGCAGTACGTATCGATAAGCCGGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTGGTTGCCCGCGCGGCAGCGA‑CTGAATCGCGGCGC‑GGACCGGTTCGCAAACACGGGCGGCGGTAAAc < 1:2212642/237‑1 (MQ=255) gggacatttccccccCCCGGCCCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAAc < 2:1994535/237‑1 (MQ=255) atattttcccccCCCGGCCCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAACAGccc < 2:1185950/242‑1 (MQ=255) aaTTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGTAAAGCGATAAACATTAGGCAGCAGTACGGAACGATAAGcc > 1:1708342/1‑141 (MQ=255) aTTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGGTAACGCGATAAACAATAAGCAGCCGGACGTATCGATAAGCCTGCGGTAGC‑GTCAGGGCCATCGCCCGCGC‑GGCCTTTTTTTTCCCTCGCGGGCGCGG‑CCGCAGCGCGGCGC‑GGCCCCGTTCGCCAACACCGGCGGGGGGAAACAGGCCCCgg > 2:5079366/1‑251 (MQ=255) aTTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAAAGCGGTAAACATTAggg > 1:2608691/1‑118 (MQ=255) tccccccCCCTCCCCCGCCATATCCCCCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAAGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGc < 2:5512517/247‑1 (MQ=255) tccccccCCCCGCCCCGCCGTCTCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGc < 2:140727/247‑1 (MQ=255) ttACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGATAAAGCGATAAGGAATAGGCAGCAGGACGGATCGa > 2:2558766/1‑132 (MQ=255) tcccccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGgc < 1:3207190/114‑1 (MQ=255) cccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGGCGATAAAGCGGTAACCATTAGGCCGCAGTAGCGATCGGAAAACCTGCGGGGGCGGCCAGGCCC‑CCGCCCCCCC‑CGCCGTTTTTTTCCCCCCCCGCAGCGG‑CTGAATCCCGGCGCGGCCCCCGTTC‑CCAACACCGGCGCCGGGGAACAGCCCCACGCaccg > 2:2127456/1‑248 (MQ=255) ccGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGc < 2:1648945/251‑1 (MQ=255) cGCCGGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCa < 1:986215/251‑1 (MQ=255) | CACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGC‑GGTAAACGACTCCCAGGCATGGGCTGA‑GTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGATAACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGC‑GTCAGGCCCATCGCCAGCGC‑GGCATTTTTTTGCCCTCGCGGCAGCGA‑CTGAATCGCGGCGC‑GTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCA > NC_000913/685834‑686326 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |