| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_000913 | 884,184 | 0 | A→G | 22.4% | 18.9 ‑0.1 0.0 | 334 | E171G (GAG→GGG) | mdfA | multidrug efflux system protein |
| Reads supporting (aligned to +/- strand): new base (34/40): ref base (122/135): total (159/175) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.95e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 353 total aligned reads displayed.
GAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGCAGTTGAGC > NC_000913/883935‑884431 | tggtttggtTTGTCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCCCCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAgg < 2:5191746/249‑1 (MQ=255) ggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGTTGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGAtg < 1:715770/248‑1 (MQ=255) ggtTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAggggggggtt > 2:3212906/1‑245 (MQ=255) tGGCAATATTGCTGGCGCAAAACATTGAACAATTCCCCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTg < 1:5763300/251‑1 (MQ=255) cAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCCCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGGGGGGGTGGTTGGTTTTTTTGCCGCATTGGcg > 1:92258/1‑250 (MQ=255) atatTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTTTCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCCGGGGGGCGCGGCGGGGGTCCATGTGCTGCCCTTGGGGGGGGGGTTTGTTTTGTTTGcccgcttgggcg > 2:1921882/1‑240 (MQ=255) aCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGGGGATCCCTGGGCTGCCCTGGGAGGGGAtggttgt > 2:1463449/1‑214 (MQ=255) aCATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGCTTGTATCAAGATCACCCCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCTCTGGTGGGCGCGGCGCGGGTCCATGTGCTGCCCTGGGGGGGGTTGTTTGGTTTGTTTGCCGCATTGGCAGCGCTCCCCTTTTTCgg > 1:165773/1‑250 (MQ=255) nttGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGGGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGGGGGTCCATGTGCTGCCCTGGGGGGGGGTGTTTGTTTTGTTTGGCGCACTGGCAGCGATCTCCTTTTTCGGTCTTCTACGAGcc > 2:1992786/2‑244 (MQ=255) gcTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGGTGATTTGTCCGTTACTTGGTCCCCTGGGGGGTTTGGGGTGGGTCCATGTGCCGGCCGGGGGGGGGATGTTTGTTTTTTTTGCCGCATTGGCCGCGGTTTCCCTTTTCGGTCTGCACCGAGc > 1:4718799/1‑238 (MQ=255) gggCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGGGGGGGTGTTTGTTTTGTTTGCCGCATTGGCAGCGGCCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAAACGCCACGCGta > 2:1498505/1‑251 (MQ=255) gggCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAAc < 2:2502684/240‑1 (MQ=255) gggCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAAAGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGGGGGGGTgtttgttt > 1:943031/1‑182 (MQ=255) gCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTAATTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGa > 1:1593951/1‑166 (MQ=255) gCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCCCCATTTGGTCCGCCGGTGGGCGCGGCGTGGATCCCTGGGCTGCCCTGGGAGGGGGTGTTTGGTTTGTTTTCCGCATTGGCGGCGAGTTCCTTTTTTGGGCTTGAACGAGGCATGGCTGGAACCGCCCcgccgtta > 2:1755817/1‑246 (MQ=255) gCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGa < 1:4227751/166‑1 (MQ=255) gCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGGGGGGGTGTTTGTTTTTTTTGCCGCATTGGCAGCGGTCTCCCTTTTTGGTCTGCAACGAGCCATGCCTGAAACCGCCACCCGcata > 2:5665053/1‑251 (MQ=255) gCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGGGGACCCCTGGGCTGCCCTGGGGGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCCTTTTCGGTCCGCAACGAGGCATGCCTGGAAACGCCCcgccgata > 1:1521318/1‑246 (MQ=255) aTAAGCCTCTGTTCAATGGGGGTTGGGGGAACCGCCGAAATTCAGGAATCCTTCGAGGGGGCGGTTTGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTGGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTGGCCGCATGGGCAGCGATCTCCTTTTGCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAgg < 2:5281914/251‑1 (MQ=255) ttGTTTCATGGGCGCTGTGGTATCCGCCGAAATTCAGGAATCCTTCGAAGGGGCGGTTTGTATAAAGATCACCGCGCTGATGGCGACCGGGGCGCTGATGGCTCCGCTACTTGGTCCGTTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCTTGGGCAGGGATCTCTTTTTTCGGTTTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAAc < 2:3365228/250‑1 (MQ=255) ctGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTTGTCCCCTGGGGGGCGCGGCGTGGGTCCCTGGGCTGCCCTGGGGGGGGTTGTTTGTTTTGTTTGCCGCATTGGCCTGGATCTCCttttt > 1:2825700/1‑201 (MQ=255) gTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGa > 2:4913093/1‑154 (MQ=255) cATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCCGATTGCTCCGCTACTTTGTCCGCTGGGGGGCGCGGCGGGGATCCATGGGCTGCCCTGGGGGGGGATGTTTTTTTTTTTTTCCGCATTGGCAGCGATCTCCTTTTTCGGGCTGCAAATAGCCATGCCTGCAACCCCCCCCCGGATAGGCggggaa > 1:5734660/1‑239 (MQ=255) gcgcTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTTTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGGGGGGGTGTTTGTTTTGTTTTCCg > 2:786274/1‑168 (MQ=255) gtgGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTTTATTAAGATCACCGCGCCGATTGCGAACGTGGCGCTGATTGCTCCGCTTCTTGGTCCCCTGGTGGGCCCGGCGTGGATCCTTGTGCTGGCCTTGGAGGGGGTGTTTGTTTTGTTTGCCGCATTGGGATGGCTCTCCTTTTTTGGTCTTCAACCCATCATGCCTGCAACCGCCCCCCGTATACGCGCGTAAAT‑GTTCCTTAAAGatc > 1:4973437/1‑248 (MQ=255) gtgGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATTAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGGGGGGGGGGCGGGGACCCATGTGCTGCCCTGGGGGGGGac > 2:862548/1‑145 (MQ=255) gggtggcgccgcAATTCTGGAACCCTCCGAAGAGGCGTTTTGTATCAAGATCCCCGGGCTGATGGCGAACGTGGCGTTGATTGCCCCGCTTCTGGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTc < 2:154187/244‑1 (MQ=255) aTACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGa < 1:3823105/135‑1 (MQ=255) ccgcAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAAATCACCGCGCTTATGGCGAACGCGGGGCTGGTTGCTTCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGCGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGGAACGAGCCATGCCTGAAAACGCCACGCGCATAGGCGAGCAACT‑Gt > 2:4200020/1‑228 (MQ=255) aTTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCCTGTGCTGCCCTGGGAGGGGGTGTTTGTTTTGTTTGCCGCATTTGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGaaa > 1:5214984/1‑219 (MQ=255) tCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCCCTGGGGGGCGCGGCGGGGGTCCATGTGCTGCCCTGGGAGGGGATGGTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTTGGTCTGCAACTAGCCATGCCTGAAAACGCCACGCGGTAAGGCGGGAAACTGGTCA‑TGGAAGAAATCGGTctgggattaaaa > 2:1390823/1‑239 (MQ=255) gAATCCTTGGAAGAGGCGGTTTGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGGGGCGTGGTTCCTTGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGc < 2:5853426/247‑1 (MQ=255) attCCTCCGAGGGGGCGGTTGGTATCAAGATCCCCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTGGGTCCGCTGGTGGGCGCGGCGTGGTTCCTTGGGCTGCCTGGGGAGGGGATGTTTGTTTTGTTTGCCGAATGGGCAGCGATCGCCTTTTTCGGTCTCCACCGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTg < 1:1756122/249‑1 (MQ=255) agggggCGGTTTGTATCAAGACCGCGGGGTGGATGGGGACGGTGGGGTTGTTTGCTCCGCACTTTGGTCGGTTGTTGGGCGCGGGGTGGAGCCATGTCCGGCCCTGGGGGGGATTGTTTGTTTGTTTTGCCGCATGGGAAGGGACCACCTTTTTCGGTCGGCAACGAGCCATGCCTAAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTgaagaa < 1:5665993/246‑1 (MQ=255) tgTTTGTATCAGGACCCTCGCGTTGGTGGGGAACGTGGGGCTGATTGTTGCGCTGGTTGGTCGGCTGGGGGGCGGGGGGTGGACCCATGTGTTGCCCTGGGAGGGGATGTTTGTTTTGTTGGCCGCATTGGCGGCGTTCTCCTTTTGCGGTCGGAAACGAGCCATGCCGGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGc < 1:2560428/249‑1 (MQ=255) ggTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGc < 2:5311113/162‑1 (MQ=255) gTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGa > 2:4639022/1‑97 (MQ=255) gTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAg < 2:713030/98‑1 (MQ=255) gTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGaa < 1:3291959/167‑1 (MQ=255) gTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAgg > 2:367762/1‑184 (MQ=255) gTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt > 2:5735427/1‑226 (MQ=255) gTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTtgtg > 1:3648652/1‑251 (MQ=255) gTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGGGCTGAAGAACGGCCGCTTtgtg > 1:2048487/1‑251 (MQ=255) aTCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGGGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTggg > 2:2656889/1‑250 (MQ=255) aGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGGGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCgg < 1:5642375/139‑1 (MQ=255) aGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCgg > 2:4522338/1‑139 (MQ=255) gATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGaa < 2:133368/160‑1 (MQ=255) gATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGtttgttttg > 2:379394/1‑94 (MQ=255) gATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAgg < 2:939783/165‑1 (MQ=255) gggCGCTGTTTGCCCCGTGTCTGGGTCCGCGGGTGGGCGCGGCGTGGATCCATGTGCTGCCCGGGGGGGGGATGTTTGTTTTTTTTGCCGCTTGGGCAGCGATCTCTTTTTTCGGTCTGCAACGGGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAg < 2:5295356/249‑1 (MQ=255) gcgcTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTACCCTGGGa > 1:1237483/1‑65 (MQ=255) gATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCaa > 2:2281075/1‑115 (MQ=255) cTCGGCTACTTGGCCCGGTGGGGGGCGGGGCGTGGATCCATGTGCGGCCCGGGGGGGGGATGTTGGTTTGGTTGGCCGCATGGGCAGCGATCTCCTTTTGCGGTCTGCAACGAGCCAGGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCt < 1:529063/250‑1 (MQ=255) cTCCGTTCCTTGGTCCGGTGGTGGGCGCGGCGTGGATCAATGTGCTGCCTTGGGAGGGGATGTTTGTTTTGTTTGCCGCATGGGCAGCGATCTCCTTTTTCGGTCTGCAACGGGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCg < 1:5369507/212‑1 (MQ=255) ccGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGcc < 2:3006856/119‑1 (MQ=255) ccGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt < 2:2800869/182‑1 (MQ=255) gCTCCTTGGTCGGCTGGTGGGCGGGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCGGCGATCTCCTTTTCCGGTCGGCACCGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTc < 1:4499348/163‑1 (MQ=255) gCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCgg > 1:1954742/1‑99 (MQ=255) cTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCCTTGGCAGCGATCTcc > 1:1382753/1‑90 (MQ=255) tgtGGCCCGCGGGTGGGCGGGGCGGGGATCCATGTGCTGCCCTGGGGGGGAATGTTTGTTTGGTTGGCCGCATTGGCAGGGATCTCCTTTTCCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGAt < 1:4628077/249‑1 (MQ=255) gTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAgg < 1:1412789/45‑1 (MQ=255) gTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTtgttttgttt > 2:4097715/1‑62 (MQ=255) gTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTtgttttgttt < 1:4098408/62‑1 (MQ=255) gTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCaa > 2:1709285/1‑98 (MQ=255) ccGCTGGTGGGGGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt < 2:1113794/170‑1 (MQ=255) ccGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt > 1:1114005/1‑170 (MQ=255) gcgTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTcc < 1:5299474/66‑1 (MQ=255) gcgTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt < 2:3559160/155‑1 (MQ=255) gcgTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt > 1:3559728/1‑155 (MQ=255) gcgTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTgg > 1:3045935/1‑181 (MQ=255) gTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAAc > 1:2752960/1‑96 (MQ=255) gTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGggggggggcgcgcggggttgt > 2:5640557/1‑194 (MQ=255) gatcggtgggcggcctggggGGGGGGTGTTTGTTTGGTTGGCCAGATGGGCGGCGATTTCCTTGGTCGGTCGGCAAGGAGCCATGCCTGAAACCGCAACGCGTATAGGGGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGAt < 1:2373033/208‑1 (MQ=255) gagccATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATGGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt < 1:1482471/147‑1 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGc < 2:4010174/81‑1 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGc > 1:4010833/1‑81 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAAc < 1:868514/93‑1 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACt > 2:5409246/1‑143 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGc > 1:3338746/1‑149 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt > 2:1617268/1‑150 (MQ=255) gATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt < 2:2202383/150‑1 (MQ=255) tCCATGTGCTGCCCTGGGAGGGGATTTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACt < 2:5455686/141‑1 (MQ=255) tCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGc < 2:889200/79‑1 (MQ=255) tCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAAcc < 2:4356651/92‑1 (MQ=255) tCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAgg > 1:294375/1‑106 (MQ=255) tCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGt > 2:4840215/1‑134 (MQ=255) tCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACt > 1:5456606/1‑141 (MQ=255) aTGTGTTGCCCTGGGAGGGGATGTTTGTTTTGTTGGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTggg < 2:3321124/190‑1 (MQ=255) gtgCTGCCCTGGGAGGGGATGTTTGTTTGGTTTGCCGCTTTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCt < 1:4200573/209‑1 (MQ=255) gtgCTGCCCGGGGAGGGGATGTTTGTTTTGTTTGCCGCATGGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGc < 2:2534036/148‑1 (MQ=255) gcCCTGGGGGGGGAGGTTGTTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCGGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt < 2:5071844/138‑1 (MQ=255) gcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAAc < 1:675081/65‑1 (MQ=255) gcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGa < 1:514378/67‑1 (MQ=255) gcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAAc > 1:49009/1‑81 (MQ=255) gcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGc < 2:2748871/137‑1 (MQ=255) gcCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt < 1:79314/138‑1 (MQ=255) gcCCTGGGAGGGGATGTTTGTTTTGTTGGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTgaag < 1:3735491/148‑1 (MQ=255) cccTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCt > 2:291947/1‑137 (MQ=255) ccTGGGGGGGGATGTTTGTTTTGTTTGCCGTGTGGGCACAGATCTCATTTGTCGTTCTACAGTGAGCCATGCTTGAACCCGCCACGGGTATAGGCGAGAAACT‑GTCACTGAAGGGACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGCAGTTg < 1:2198380/251‑1 (MQ=255) gggAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGc > 1:2509819/1‑132 (MQ=255) | GAGTGGTGTGGTTTATCGTCACCTGTCTGGCAATATTGCTGGCGCAAAACATTGAACAATTCACCCTGTTGCGCTTCTTGCAGGGCATAAGCCTCTGTTTCATTGGCGCTGTGGGATACGCCGCAATTCAGGAATCCTTCGAAGAGGCGGTTTGTATCAAGATCACCGCGCTGATGGCGAACGTGGCGCTGATTGCTCCGCTACTTGGTCCGCTGGTGGGCGCGGCGTGGATCCATGTGCTGCCCTGGGAGGGGATGTTTGTTTTGTTTGCCGCATTGGCAGCGATCTCCTTTTTCGGTCTGCAACGAGCCATGCCTGAAACCGCCACGCGTATAGGCGAGAAACT‑GTCACTGAAAGAACTCGGTCGTGACTATAAGCTGGTGCTGAAGAACGGCCGCTTTGTGGCGGGGGCGCTGGCGCTGGGATTCGTTAGTCTGCCGTTGCTGGCGTGGATCGCCCAGTCGCCGATTATCATCATTACCGGCGAGCAGTTGAGC > NC_000913/883935‑884431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |