New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	15 (0.330)	18 (0.420)	17/518	NT	55.3%	coding (305/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	= 1209602	15 (0.350)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACGGGTAGTTATTACTA  >  NC_000913/1207508‑1208105                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                               gTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGCTATCAAATCGGATGGCACTGTGCAAACGGCCCTCGAACACCTTGGTTTGGGAGAAGGat                                                                                                                                                                                                                                                                                                              >  1:115929/1‑299 (MQ=255) gTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCCCTGTGCAAACGGCTCCCGAAACCCTTGGTTTGGGAGAAGGct                                                                                                                                                                                                                                                                                                              >  1:375355‑M1/1‑298 (MQ=255) gTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTTCAAACGCCGCTCGACAACATTGGTTTTGGAGGAGGAga                                                                                                                                                                                                                                                                                                             >  1:102069/1‑300 (MQ=255)   gccgcatactacgccccagccgatccagcttccagacaaccagagtgtcacctgccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgttttctggtcatttgttgatacgcgtacatagccaataagccttttaaatccccctggtaaaagcaggaatgattccatttgcttgttattttttccttttcataaacgTTGGTTTGGGAGAAggagaaa                                                                                                                                                                                                                                                                                                           <  1:367364‑M1/21‑4 (MQ=255)        cacGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGAGCTCAAATCGGATGGCACTGTGCAAAAGGACCTCGAACACCTTGGTTTGGGAGAAGGctgtgcatta                                                                                                                                                                                                                                                                                                      >  2:93062‑M1/1‑291 (MQ=255)          cGAAAAGCGCGCAGAAGGATAAGTTCAGCGCGGGTAAGAACTGGGTTACCCGTGGTAACCCCGATACCTGCACGCCTGCCACGTATCTGGATAATGACTACTTTGACATGGTACAGGAGGAACTTTGCAGCGCGCTGGAGCCGTCCGGGGCCAGCCAGGAGAAGGGGCGGCAGTACAAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATGCGTTTGGCGATAACAAATCGGATGGCACTGTGCAAACAGCTCTCGAAAACCTTGGTTTGGGAGAAggctctgcattacc                                                                                                                                                                                                                                                                                                    <  2:247062/301‑13 (MQ=255)          cGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacc                                                                                                                                                                                                                                                                                                    <  2:375364‑M1/301‑13 (MQ=255)                     ccgAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACACGTGGTAACCCTCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATATTGCAGGAGGACCTTTGCATCGTGGTTCAGGCATCCGGTGCCAGCCTGGAGCAGGGGCGGCAGTACGAGTAACTTACGGCACTTCCCGCGCTGCTGTCAAGACGTGAGTACCCGTTTGGAGCTATCAAACCGGATGGCACTGTGCAACCGGCTGTCGAAAACCTCGGCTTGGGAGAAGGAGCAAGACTCAATGCAGAAACgg                                                                                                                                                                                                                                                                                         >  2:102267/3‑301 (MQ=18)                                 tgcGGAGCGGGTAAGAACGGTGTTACCCTGGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGGTGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                                                                                                                                                                                              <  1:344325/298‑1 (MQ=255)                                          ggTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCCGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCAAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTAACGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCACTCGCAAACCTTGGTTTGGTAGAAGTAGCCAAACTCACTGCAGCAACGGCTAAGTAAGGACGAACC‑GG‑tt                                                                                                                                                                                                                                                                  >  2:281983/1‑301 (MQ=18)                                          ggTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGCATCTCGAACACCTTGGTTTGGGAGAAGGctcttccttccctgtttgtgtcgcggttccgtggccttcagcc                                                                                                                                                                                                                                                                     >  1:141953‑M1/1‑257 (MQ=255)                                               gAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                                                                                                                                                                                                                                                                >  1:171031‑M1/1‑252 (MQ=255)                                                      tttACCCGTGGGAACCCCCAGGCCGGACAGGCGGCCACCGAGCTGGATGATGACTAATTTGACAGGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATAc                                                                                                                                                                                                                                                      <  1:398603/301‑1 (MQ=255)                                                      ttaagagaccggtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttggtgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATAc                                                                                                                                                                                                                                                      >  1:338595‑M1/230‑301 (MQ=255)                                                            ataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcctgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGCGACGGAGCAAAACTCAATGCAGCAACGGCTGCATTAGGCAGAACC‑GG‑TTTCATAGCTATACCGgttt                                                                                                                                                                                                                                                <  2:393266‑M1/78‑2 (MQ=255)                                                            ataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                                                                                                                                                                                 >  1:44604‑M1/224‑254 (MQ=255)                                                            ataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                                                                                                                                                                                 <  2:44604‑M1/31‑1 (MQ=255)                                                               ggTAACCCCCAGACCGGCACGCCTGCAACAGATCTGGGGGAGGACTACTTTGACATGTTGCAGGAGGAACTTGGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGGGAAGGGGCGGCACGACCAGTTACTTAACGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATg                                                                                                                                                                                                                                              <  1:102267/300‑1 (MQ=255)                                                                tgtcctgtgcagttttttcagtcccggcgtttcggagtttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcagagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccattggcttgtgatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                                                                            >  1:284633‑M1/220‑301 (MQ=255)                                                                 tAACCCCCATACCGGCACGACTGACATCGATGTGGATAGTGACTACTTTGACATGTGGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGGAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCCAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                                                                            <  2:102069/300‑1 (MQ=255)                                                                 gtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaacaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgaggccatttgcttgttatttcttcattttcataaacgTTGGTTTGTGAGAAGGAGCAAAACTCAATGCAGAAACGGCTACATTAGGACGCACG‑TG‑TTTCATAGCTATAc                                                                                                                                                                                                                                                      <  2:338603‑M1/72‑1 (MQ=255)                                                                    cccccAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCACGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgcaatgg                                                                                                                                                                                                                                          >  2:424380‑M1/1‑231 (MQ=255)                                                                           tttgtgtcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcagcctgcacagttaagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacagagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                                                                 >  1:393257‑M1/209‑301 (MQ=255)                                                                           aCCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                                                                                                                                                                                   <  1:192616/299‑1 (MQ=255)                                                                              ttttcagtcccggcctttcggactttgggccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttccgcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                                                                                                                                                                                                                              >  2:102383‑M1/206‑301 (MQ=255)                                                                                   gaggtgcaagtgggtataagggacagactTGGAAATGTTGCAGGGGGAACTTTGCAGCGTGGGGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                                                                          <  1:70211/274‑1 (MQ=25)                                                                                    ccggcaaCCGGTCTGGATGATGAATCTGTTGACATGTTGCAGGAGGAGCTGTGCAGCGTGGTGGAGGCATCCGGGGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGAACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                                                                                                                                                                                         <  1:281977/294‑1 (MQ=21)                                                                                    ccTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTGTGCAGCGTGGTGGAGGCAGCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctg                                                                                                                                                                                                                                                                                                  <  1:50365‑M1/229‑15 (MQ=255)                                                                                           catttctgactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagctcattacgttgtatatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt                                                                                                                                                                                                                 >  1:46209‑M1/193‑301 (MQ=255)                                                                                              aTCGGGATGAGGACTACTTTGGCAGTTTGCAGGGGGAACTTTGCAGCGGGGTGGGGGCAGCCGGGGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACTGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                                                                                                                                                                                               <  1:168009/300‑1 (MQ=25)                                                                                                             actTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCACTGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATCGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                                                                          >  2:70211/1‑274 (MQ=255)                                                                                                                       gTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgcaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctt                                                                                                                                                                                         >  1:58925‑M1/1‑180 (MQ=255)                                                                                                                          gCAGGGGGAACGTTGCAGCGTGGTGGACGCATCCGGGGCCAGCCTGGAGAAGGGGCCGAACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatcc                                                                                                                                                                                     <  2:415247‑M1/300‑124 (MQ=255)                                                                                                                              aaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatatccaataagcatgttaaatccccctggtaaaagcaggcatgatgccatttgcttgttatttcttcattttcataaccgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                                                                                                                                                                                   <  2:136755‑M1/91‑1 (MQ=255)                                                                                                                              aaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTAt                                                                                                                                                                                                                                   >  1:136754‑M1/158‑248 (MQ=255)                                                                                                                                      ttggaggggggtggtgcctcccGGGGCCAGCCTGGAGAAGGGGCGGCCCGACCAGTGATTTACCGCACTTCGGGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGAGGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg                                                                                                                                                                      <  1:46777/281‑1 (MQ=37)                                                                                                                                                   gAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTAAGTGGGGGTGGAATCCCGCAAAAGCATCTGCCTCTGGGGGGGCGGGAAATAAAg                                                                                                                                                         >  1:70612/1‑301 (MQ=255)                                                                                                                                                                   ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTGCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGTGGGTGGCATGCGGCAAAAGCATCTGCATCTGGGGGGGATGGTATTACAGTTGTATTCCCGGTtgg                                                                                                                                         <  2:2368‑M1/181‑2 (MQ=255)                                                                                                                                                                     gtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGCTTGGTGGTATTGAGCAATCAGTCATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGt                                                                                                                                       <  2:69801‑M1/183‑1 (MQ=255)                                                                                                                                                                          tctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGCTTGGTGGTATTGAGCAATCAGTAATAATTCAGTGGGGGTGGAATGCCGACAAAGCATAGGACTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTtaat                                                                                                                                  <  2:378071‑M1/188‑1 (MQ=255)                                                                                                                                                                             gtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCACTCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTaataat                                                                                                                               <  1:291803‑M1/191‑1 (MQ=255)                                                                                                                                                                             ggtggtgcACGACCATGTATTTTCCTCACTTCTGGTGTTGAGGTTAAGCCGCAAGCATCCTGTTTGCGATAGCAAACTGGACGGCACTGGTCAAACGGCTCTCTAAAAACTGGGTTTGGGAGAAGGAGCAAAACTCAATGCAGAAACGGCTACATTAGGACGAACC‑GG‑TTTAATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTtaataa                                                                                                                                <  1:230074/294‑1 (MQ=255)                                                                                                                                                                                        aCCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggat                                                                                                                      >  2:332928‑M1/1‑115 (MQ=255)                                                                                                                                                                                               acttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggctaaggcttatccgaccaataaattgcctgatttacgtggtgagtttattcgtgtctgtgatgacgggcgagggattggtac                                                                                                                >  2:194376‑M1/1‑108 (MQ=255)                                                                                                                                                                                                  tacCGCACTGCGCGCGATGCTGTTAAGCCGCAAGAGTTCGTTGGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCTAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggt                                                                                                            <  2:115929‑M1/301‑197 (MQ=255)                                                                                                                                                                                                                      catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAgcg                                                                                       >  1:69801‑M1/70‑300 (MQ=255)                                                                                                                                                                                                                        ttAAGACGAAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCGCTCGAAAACCTTGGTGTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccacgccgccaacaggctggctgaaatgcaatggtggcgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcagg                                                                                      <  2:58925‑M1/301‑219 (MQ=255)                                                                                                                                                                                                                        tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                                                                            <  2:163186‑M1/82‑1 (MQ=255)                                                                                                                                                                                                                        tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGAt                                                                                                                                                                                                                                            >  1:163185‑M1/68‑149 (MQ=255)                                                                                                                                                                                                                          aaGCCGCAAGAATCCGTTTGGCGATATCAAAGCGGATGGCACTGGGCAAACGGCGCCCGAAAACTTTGGTGTGGGAGAAGGctatgcattaccgtttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcagggg                                                                                    <  1:152472‑M1/301‑221 (MQ=255)                                                                                                                                                                                                                                  ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcatgttcataaacgTTGGTTTGGGATAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGc                                                                          >  2:291809‑M1/58‑301 (MQ=255)                                                                                                                                                                                                                                    aaTCCCGTTGGCGATATCAAATCGGGTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTGGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaac                                                                            <  1:194375‑M1/299‑229 (MQ=255)                                                                                                                                                                                                                                               cGATATCAAATCGGATGTGACGGTGCAAACGTCTCTCGAAAACCTTGGTTTGGGAGAATGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctgtttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgc                                                                <  1:424371‑M1/300‑241 (MQ=255)                                                                                                                                                                                                                                               cGATATAAAATCGGATGGCACTGTTCAAACGGCTCTCGCAACCCTTGGTTGGTGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaagggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgc                                                                <  1:332920‑M1/300‑241 (MQ=255)                                                                                                                                                                                                                                                    tgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAacggggggca                                                         <  1:79113‑M1/262‑3 (MQ=255)                                                                                                                                                                                                                                                                gCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagcttattcgtgtccgggatgacgggcgggggattgatacaggtggctctattttaagtattcaggggtaggcaacggaggatcatgctcatggattaccgtcaaa                                              >  1:77370‑M1/1‑43 (MQ=255)                                                                                                                                                                                                                                                                     gtgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgaagggcgggggattgatacaggtgggtctattttaagtattcaggggtatgcaccggaggatcatgctcttggcttcctgtcaagctaca                                         >  2:186116‑M1/1‑38 (MQ=255)                                                                                                                                                                                                                                                                                              gTTGGGGGGAAGGAGACAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGG‑GTTCAGAGGTATACCGGTGATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGTGGAGGATGGAAATACAGTTGTATTCCCGGTTGAGTTTAATAATGCCTGTGTTGCGGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACg                <  2:79113/300‑1 (MQ=255)                                                                                                                                                                                                                                                                                                   ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgtgatgacgggcgggggattgatacaggtcgcgctattttaagtattcaggggtatgcaacggaggatcatgctcatggattcccgtcaaggtccacgattgtaacggatgcaacgattaattt             >  2:301406‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                                                                                         ggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc                                                                                                                                                                                                                         >  2:294886‑M1/1‑2 (MQ=255)                                                                                                                                                                                                                                                                                                         ggctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc                                                                                                                                                                                                                         <  1:294880‑M1/89‑88 (MQ=255)                                                                                                                                                                                                                                                                                                          gAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTCTCAATGCAGTGGAACCTGGGTGATATACAACCACTTCGTTTTTATTACGTTGGCCAGCTCAACCGGGTAGTTTTTCCtt  >  1:281888/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                               GTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACC‑GG‑TTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACGGGTAGTTATTACTA  >  NC_000913/1207508‑1208105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.