| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,334,502 | C→A | 10.1% | R265S (CGC→AGC) | ispB → | octaprenyl diphosphate synthase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_000913 | 3,334,502 | 0 | C→A | 10.1% | 4.2 0.0 ‑0.9 | 41 | R265S (CGC→AGC) | ispB | octaprenyl diphosphate synthase |
| Reads supporting (aligned to +/- strand): new base (2/2): ref base (17/20): total (19/22) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.21e-01 | ||||||||||
GCGTTATCTATAGCAAAACCGCGCGTCTGTTTGAGGCTGCCGCGCAGTGTTCCGGGATTCTGGCTGGCTGTACGCCGGAGGAGGAGAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATAACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAAT > NC_000913/3334203‑3334797 | gcgTTATCTATAGCAAAACCGCGCGTCTGTTTGAGGCTGCCGCGCAGTGTTCCGGGATTCTGGCTGGCTGTACGCCGGAGGAGGAGAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGATGCCGCTGCTGCATGCGATGCCACATGGCACACCA‑GAACAGGCACAGAAGATCCTGAACACAATCGAACAGGGTAACGGACg > 1:314046/1‑301 (MQ=255) ttgtctatagtcagtccGCGCGTCTGTTTGAGGCGGCCGAGCAGTGGTCGGGGATTCTAGCTGGCTGTTCGCCGTAGGAGTAGAAAGGCCTGCAGGATTCTGGGCGCTATCTCGGCACTGCTTTCCAGTAGAGCGACGATTTACTCGATTACAAAGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACAAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCa < 2:84270/286‑1 (MQ=255) aaaccgctgtgcggTTTGAGGCTGCCGTGCAGTGTTCCGGGATTCGGGCTGGCTGTACGCCTGAGGAGGAGAAAGGCCTGCAGGATTATGGGCGCTAGCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAAcc < 2:356143/288‑1 (MQ=255) atgagcgtactgttcgtggctggcggctggagGGACGCCGGGGGAGGGGTAAGGAATGCAGGAATATGGGCGCTATCTCGGCACTGCTTTACAGTTGAACTAAGAGTGACTCTGTTACAAGGCCGATGGCGAACAGTTAGGTAACAATGTCGGCGAAGATCTGAACGAAGGTAAACCCACGCTGCCGCTGCTGCATGCTATGCATCAGGTCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACATGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGc < 2:414715/276‑1 (MQ=255) gCCGCGCAGTGTTCCGGGATTCTGGCTGGCTGTACGCCGGAGGAGGAGAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCtt > 1:75145/1‑301 (MQ=255) gcgcAGTGTTCCGGGATTCTGGCTGGCTGTACGCCGGAGGAGGAGAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCCTCTTCTGGACCCGGTTCTGGAAGCCATGAACGGCtgtg > 1:343501/1‑301 (MQ=255) tgtTCCGCGACTCGGGGTGTCTGTTCGCCGGATGAGTGTACATGCCTGCAGGATTATGGGCGCCAACTCGGCACTGCCTTACAGTTGACCGACGATTTACTCGATTAACACTCCTATGGCGAACAGTTAGGTAAAAAGGCCGGTGACCATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTTCCTGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACTGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGAt < 2:346200/298‑1 (MQ=255) ggATTCTGGCTGTCTGTACGCAGGAGGAGGAGAAAGGCCTTCAGGATTATGGGCGCGATCTCGGAACTGCTGTCCAGTTGATCGCCGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAAt < 2:314054/300‑1 (MQ=255) gctgTACGCCGGAGGATGAGAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTATGACACCGGTTCGGGAAGCACTGCACCCATGTGGATCCCTTGCATGGACGCCTccggg > 1:394896/1‑297 (MQ=255) ggagAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCTATTACAATGCCGATGGCGAACAGTGCGGTAAAAATGTCGGCGACGACCTGAACGAAGGTAAACCGACGCTGCCGCTGATGCATGCGAGGCCTCATGGCGCACGA‑GAACAGGCACAGATGATCCGTACGGGCCTCGCACGGGGTAAGGGTCGACATCTTCTGTAACCGGACCCGGCAGCAATGCAAGCTTGTGGAGCACTTGATTGGCCGGGTCAGCGTGCCAAGgagaacgca > 1:250322/1‑294 (MQ=255) ttggATCGACGGTGGACTGGATTAAAAGGCCGAGGGAGAACAGTTAGGTAAAAATGTCGGGAACGATCTGAACGAAGGTAAACCGACGGTGCCGGTGCTGCATACGATGCATCATGGCAGACCA‑GAACAGGAACAGATGATCCGTACCGCGAGCGAACAGGGTAACGGTCGCCAGCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGGGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACAccc < 2:100197/290‑1 (MQ=255) gTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCCCTTGAATGGACGCGTCCGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGAAGCGTTACAGGTGCCCCCGGACAccc > 1:100197/1‑293 (MQ=255) gATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCACCGAACAGCGTAACGGTCGCCCTCTTCTGGACCCGGTTCTTGAAGCAATGCACGCTTGTGGATCTCTTTATTGGCCGCTCCACCCTGCCGCGGCAGAACCCGACCACTCCCTCGCACCCTTCCCGGTGCTccccgccccaccttcgacagaa > 1:221222/1‑282 (MQ=255) attgaagcgagtagacagcaaagtgCGACCAGTTAGGAAAAAATGTCGCCGAGGAGCTGAACGAAGGTACACCGCTGCTGCCGCTGCTGCATGCGATGCCTCATGGCACAACA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAAGGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTc < 2:61492/275‑1 (MQ=255) tttACTAGACTACAACGCCGAAGTCGAACAGTTAGGTAAAGATGTCGGCGAAGATCTGAACGAAGGGAAACCGCCGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAATAGGCACAGATGATCCGTACCGCCAGCGAACAGGGCAACGGTCGCCATCTTCTTGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGTCGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATc < 2:75145/301‑1 (MQ=255) cTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGACCAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTTGAAGACATGAAAGCTTGCGGATCTCTTGAATGGACGCGTCAGCTTGCCGAGGCAGAAGCCATCCAAGCCATCGCATCGTTACCGGTGCCTCCGGACCCCCCTTgtctggaaccacccacggac > 1:15925/1‑281 (MQ=255) gCCGATGGCAAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCCTGTGGATCTCTTGAATGGACGCTGCAGCGTGCCGAGGAAGAAGCAGACAACGCACTCGCAGCGTTACCGGTGCTCCCGGACACCCCGTGGCGAGGACCACTCATCGGCCTccccccccac > 1:168513/1‑291 (MQ=255) ggCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGCATGGACGCGTCAGCGTGCCGGGGAAGAAGCAGACCACGCCATCGCAGCGTTACAGGTGCTCCCGGACCCCCCTTGGCGAGACGCACTCATCGGCCTCGCGCACATCGCTGtt > 1:149335/1‑300 (MQ=255) gggAAAAGTTAGGTAAAAATGCGGGCGACGAACGGAACCAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCAGCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTAGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTc < 1:332852/298‑1 (MQ=255) cAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACAGTAGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCCCCCACCGCTGTTCCAcgcg > 1:202462/1‑301 (MQ=255) gaTCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGCCACCCCTTGGCGAGACGCACTCATCGGCCTCGCGCCCATCGCTCTTCAACCCGATCGTTACTCCCCCCCCCCCATc > 1:215427/1‑300 (MQ=255) aTCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTAGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTCCAGGTGCTCCAGGacac > 1:179793/1‑226 (MQ=255) aTCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTAGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCAGGacac < 2:179794/226‑1 (MQ=255) cctccgaggcatgacaggaaggatGGCACACCA‑GAAAAGGCACAAATGGGCAGTACCGCCATCGAACAGGGTAGCGGTCGCCATTTTCTGAAACCGGTTCAGCAAGCAATGAACGCTTGTGGATCTTTGGAATGGACGCGTCAGCAGGGCGAGGAAGAAGCAGACAAAGCCATCTCAGCTTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGAACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTa < 2:15925/279‑1 (MQ=255) cgatgcagcAAGCGATGCATAAGGGGACACAA‑GAACAGGCACGGATGATCCGTAACGCCAGCGAACAGGGTAACAGGAGCCATCTTCTGGAAACGGTGCGGGGAGCAAGGAAGGATTGAGGGTCTCGTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCGCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTa < 2:202464/297‑1 (MQ=255) cgtcggcacgcgtagaaacatGCCACAACA‑AAACAGGCAAATCTGACCGGTACATCAATCGAGCAGGGTAAAGGTCGCCATCGTCTGGAACTGTTTCTGGAAGTAATGAACGCTTGTGGATCGCTTGAATGGACTCGGCAGCGTGCCGAGGAAGAAGCAGACAAAGCCAGCGCAGCGTTACAGGTTCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTTAACGCGATCGTTAATCCCCGCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTa < 2:236287/280‑1 (MQ=255) gctgcATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTCCAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCACCGCCCTCCCGCACATCGCTGTTCAACCCCACCGTTAATCCCCCCCCCCCACCCCCCCCACCCCGCGGGAGGGGTCCCGTAAGtt > 1:372694/1‑300 (MQ=255) cggaaTGCGATGCAGAATGGCA‑ACCACGAACAGGCACAGATGAGCCGTGCCGCCATCGAACAGGGTAACGGTCGCCCTCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGGGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTc < 1:432712/296‑1 (MQ=255) gCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTGCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACACAGCAATCGCAGCGTTACAGGTGCTCCAGGACACCCCTTGGCGAGAAGCACTCATCGGACTGGCGCACACAGGTGGTCAACGGGATGTTTAATCGCCTCCCCCCATCCCGCCCATCCAGCGGGAGGGTTcacggcaagtccatcaaa > 2:77695/1‑284 (MQ=255) atGGAACACAA‑GAACAGGCAAATGTGAACCGGCACGCCATCTAACTGGGTAACGTTCGCCAGCTGCTGGAACCGGTTCTGGCAGCAATGAACGCTTGTGGTTCTCTTGCATGGACGACTCAGCGTGCCGAGGCAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCTCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGGTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTc < 2:215431/301‑1 (MQ=255) ggCACACCA‑GAACAGGCACAGAGGATCCGTACCGCCATCGAACAGGGGAACGGTCGCCATCGTCTGGAACCGGTTCGTGACGCAATGAACGCTTGTGGATCTCGTGAAGGTGCGCGTAAGCGTGACGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGTTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTc < 2:168514/299‑1 (MQ=255) cacCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGCAGCAATGAACGCTTGTGGATCTCTTGAATGGCCGCGTCAGCGTGCTGAGGAAGAAGCAGACAAAGCCATCGCAGCGATACAGGTGCTCCGGGACACCCCTTGGCGAGAAGCACTCATCGCACTCGCGCCCATCTCTGTGCAACGCGATCGTTAATCCCCTCCCCTCATcc > 2:406808/1‑246 (MQ=255) cacCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACCAAGCCATCGCAGCGTTACAGGTGCTCCCGGACAGCCCTTGGCGAGAAGCACGCATCGGCCTCGCGCACATCGCTGTTCCACACGCTCGTTAATCCCCTCCCCTCATCACGCGCAGCCGACAGGACGGGTCCAGTACTGTCCCTCAACACACCTATTccactca > 2:178845/1‑295 (MQ=255) ccA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCCAATCCCGCGCAGCGCGCGGGCTGGTTCCCGTACGTTCCATAAAAACACTTATTCAGCCCtat > 2:183721/1‑301 (MQ=255) aaCAGGCACAGATGACCCGTACCGCCAGCGAACAGGGTAACGGTCGCCATCTTCGGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATaa < 1:178844/299‑1 (MQ=255) aaCAGGCACAGAGGATCCGTACCGGCAGCGAACATGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATaa < 2:343510/299‑1 (MQ=255) gaacaGATGTGCCGTACGTCCATCAAACAGGGTAACGGTCGCCATCGTCTTGAACCGGTCCTGGAAGCAATGAACGATTGTGGATATCGTGAAGTGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATAac < 2:394905/293‑1 (MQ=255) cagatacgccGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGCAGCAATCAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCCTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATAac < 2:19202/284‑1 (MQ=255) caGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCCTCGGCCTCGCGCACATAGCTGTTCAACGCGATCGTTAATGCCCCCCCCTCATCCCGCACAGCGCGCGGACTGGTTACAGTAAGCTCCATCAAAACACTTATTCCGctctctcac > 1:19202/1‑287 (MQ=255) aaaaGGGTAACGGTCGCCAGCTTCTGGAAACGGTTCTGGAAGAAATGAACGATTGTGGATCTCTGGAATGGACGCGGCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCTCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATAACACCTGAAAAATAGGGATGTGCATCTTtatat < 2:149336/298‑1 (MQ=255) aaggTCGCCAGCTTCTGGAACCGGGTGTGGAAGCAAGGAACGCTTGTGGAGCTCGTGAATGGACGCGGCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATAACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAat < 2:221227/299‑1 (MQ=255) | GCGTTATCTATAGCAAAACCGCGCGTCTGTTTGAGGCTGCCGCGCAGTGTTCCGGGATTCTGGCTGGCTGTACGCCGGAGGAGGAGAAAGGCCTGCAGGATTATGGGCGCTATCTCGGCACTGCTTTCCAGTTGATCGACGATTTACTCGATTACAATGCCGATGGCGAACAGTTAGGTAAAAATGTCGGCGACGATCTGAACGAAGGTAAACCGACGCTGCCGCTGCTGCATGCGATGCATCATGGCACACCA‑GAACAGGCACAGATGATCCGTACCGCCATCGAACAGGGTAACGGTCGCCATCTTCTGGAACCGGTTCTGGAAGCAATGAACGCTTGTGGATCTCTTGAATGGACGCGTCAGCGTGCCGAGGAAGAAGCAGACAAAGCCATCGCAGCGTTACAGGTGCTCCCGGACACCCCTTGGCGAGAAGCACTCATCGGCCTCGCGCACATCGCTGTTCAACGCGATCGTTAATCCCCTCCCCTCATCCCGCGCAGCGCGCGGGATGGTTCCAGTAAGTTCCATAAAAACACTTATTCAGCTCTATAACACCTGAAAAATAGGGATGTGCATCTTTATATATTCTGAAT > NC_000913/3334203‑3334797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |