New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1152249	72 (1.230)	4 (0.070)	3/588	8.7	5.5%	coding (311/1242 nt)	fabF	3‑oxoacyl‑[acyl‑carrier‑protein] synthase II
	?	NC_000913	= 1152266	68 (1.180)					coding (328/1242 nt)	fabF	3‑oxoacyl‑[acyl‑carrier‑protein] synthase II
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

TGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1151953‑1152249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCCC  <  NC_000913/1152266‑1151971                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCTTTTCGATACTAGCGCCTATGCAACGACATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTCTCTCGCGCAAAGAACACCGCAAGATGGATGCCTTAATGCAATATGGCATTGTAGCTGGCGTTGAGACACTGCAGGATTCTGACCTTGAAATAACTGAAGAGACCGCAACCCGCATTGGTGCCGACAtt                                                                                                                                                                                                                                                                                                      >  1:174314/1‑299                                                             ctcttccgatCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGA                                                                                                                                                                                                                                          <  1:197999/291‑1                                                                         TGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGCCAATCCCGGAGCCAAGTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAAgatcggaagag                                                                                                                                                                                                                              >  2:198226/1‑290                                                                                                                                                                                                                                                                                                   cTGCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGC    <  2:100755/300‑1                                                                                                                                                                                                                                                                                                     GCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCag  >  1:100628/1‑299                                                                                                                                                                                                                                                                                                     GCCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCC   <  2:289907/300‑1                                                                                                                                                                                                                                                                                                      CCGCCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCCC  <  2:394672/300‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTAGTTGTGACCGGACTGGGCATGTTGTCTCCTGTCGGCAATACCGTAGAGTCTACCTGGAAAGCTCTGCTTGCCGGTCAGAGTGGCATCAGCCTAATCGACCATTTCGATACTAGCGCCTATGCAACGAAATTTGCTGGCTTAGTAAAGGATTTTAACTGTGAGGACATTATCTCGCGCAAAGAACAGCGCAAGATGGATGCCTTCATTCAATATGGAATTGTCGCTGGCGTTCAGGCCATGCAGGATTCTGGCCTTGAAATAACGGAAGAGAACGCAACCCGCATTGGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1151953‑1152249 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCAATCCCGGAGCCAATTGCGGCACCAATGCGGGTTGCGTTCTCTTCCGTTATTTCAAGGCCAGAATCCTGCATGGCCTGAACGCCAGCGACAATTCCATATTGAATGAAGGCATCCATCTTGCGCTGTTCTTTGCGCGAGATAATGTCCTCACAGTTAAAATCCTTTACTAAGCCAGCAAATTTCGTTGCATAGGCGCTAGTATCGAAATGGTCGATTAGGCTGATGCCACTCTGACCGGCAAGCAGAGCTTTCCAGGTAGACTCTACGGTATTGCCGACAGGAGACAACATGCCC  <  NC_000913/1152266‑1151971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.