New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1287074 =51 (0.870)3 (0.050) 3/578 8.6 5.6% intergenic (+548/+13) narI/tpr nitrate reductase 1, gamma (cytochrome b(NR)) subunit/protamine‑like protein
?NC_000913 1287185 = 52 (0.920)intergenic (‑9/+59) tpr/tyrV protamine‑like protein/tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCC  >  NC_000913/1286893‑1287479
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                          
gtggGGGAAGGATTACTCAGCGCTGGGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCGCTCGCTGCCGCTCGAGCCGAACTTTAGTCGAAGCTGCTCATCCATCCCTGCACGGGCAGCATAGTTGATGGCGGTTTGGTTTGAGAATTCAGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGc                                                                                                                                                                                                                                                                                                     <  1:52844/300‑1 (MQ=11)
    gggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGATCTTAGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCGCGAGTCGAACCTTGGTCGAAGCTGATAATTCTTCCGCGCATGGGccggtt                                                                                                                                                                                                                                                                                                >  2:356934/1‑296 (MQ=14)
                      cTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGt                                                                                                                                                                                                                                                                             >  2:83652/1‑301 (MQ=255)
                       tGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCCTGGGCA‑GAATATTTAATTGCGGATTCGtt                                                                                                                                                                                                                                                                            >  2:271457/1‑301 (MQ=255)
                        gcgcgcTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGTTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCGGCGCGCTTCGCCCTTCGGTTCGTTGCCGTCGGCACCGGTCTGTAGCTGCCTCTCGCATCGAACCTTGGTCGGACCTTTCCGTCCGTCCCACCATgcgtcgattctcgtctggtgggtacgttg                                                                                                                                                                                                                                                                            >  1:294795/1‑273 (MQ=14)
                                  cccTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAACTTCTCATCCTTCCCCGCATGGGCA‑GATTATTTAATTTGGGATTCGTTGGGAAGTTCAg                                                                                                                                                                                                                                                                 >  2:373085/1‑301 (MQ=255)
                                         gagcGTTGCCGCAGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGTATTCGCTTGAGAGTTCAGGGACTTTTGACAGTGATGGTGGTGGGGGAAGGATTACTCACCGCTGAGCGCTTCGCCCTTCGGGTCCGTGCCGGCGGCAATGCTCTCTCGCTGGCGCCCGCAGCGGACCTTGTCAGTATCGGCTTTTGCTTCCCACCCTGGGCG‑GAATATTTATATGTGGTGTCGGTGGGCGGTTCAggggac                                                                                                                                                                                                                                                            >  1:18367/4‑296 (MQ=12)
                                          gTCGTTGCATGCGCAAACGCTCTCTCGCTGACGCTAGATCCGAACCTTCGTCGTAGCTTCTCATCCTTCCCCGCATGGGCAGAATAGTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACCCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACttt                                                                                                                                                                                                                                                          <  1:83545/300‑1 (MQ=255)
                                                          aCGCTCTCTCGCTGACGTTCGGGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGACTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑tggaggtg                                                                                                                                                                                                                                        <  2:67576/301‑1 (MQ=255)
                                                               ctctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGGTCAGGGCCTTTTGAAAGTGA‑TGGTGGTgggggg                                                                                                                                                                                                                                   >  2:171261/1‑300 (MQ=255)
                                                                      tGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGAttt                                                                                                                                                                                                                            >  2:393213/1‑300 (MQ=255)
                                                                         cGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTAAGCGCGTCGCGCTTCGCCCTTCGGTTCGTGTCTTCTCGCAACGCCCTCTCGCTGGCGCTCGAGGCGAACCTTGGCCGCAGCGTGTCATCCTTCCCCGCATGGCCA‑CAATATTTAATCACGGATTCCTTGGGACGTTCAGGGACTTTTGAAAGTGA‑GTGCTGTGAGGCAAGGAtctgat                                                                                                                                                                                                                         >  1:516943/1‑296 (MQ=14)
                                                                             cGAGCCGAACCTTAGTCGAAGCTTTTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCtt                                                                                                                                                                                                                     <  2:419372/301‑1 (MQ=255)
                                                                               ccgatttccTTAGTCGAAGCTTCTCACCCTTCACCGCATGGGCAGAATATTTGATTTCGGATTCGCTTGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGGCCTTCGGGTCGGTGCCTGCGGCACCGCTCCTTCGCGGCCCCTCGACTCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCg                                                                                                                                                                                                                   <  1:505742/294‑1 (MQ=14)
                                                                                     aCCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGACAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGCGAAGGATTACTCAGCGCTGCGCGGTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCg                                                                                                                                                                                                             <  1:372655/301‑1 (MQ=255)
                                                                                     aCCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTGGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTTCCCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCg                                                                                                                                                                                                             <  1:271138/301‑1 (MQ=255)
                                                                                      ccTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGagatcgg                                                                                                                                                                                                            >  2:506376/1‑295 (MQ=255)
                                                                                           ggtgcaGCTTCTCATCCTTCTCCGCTTGGGCAGAATATTTGATTGCGGATTCGTTTGAGAATTCCGGGGCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTGCTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGACCCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGAc                                                                                                                                                                                                        <  2:373752/295‑1 (MQ=255)
                                                                                                  cTTCTCATCATTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAATGCCGTGTCTTTTGTGAGTGATGGTGGTGGGGGAAGCATTACTCTGCGCTGCTCGCTTCGACGTTCGTGTCGTGGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGAt                                                                                                                                                                                                 <  1:486316/300‑1 (MQ=17)
                                                                                                   ttCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTGGCCTGCGGCAACGCTCTCTCGCTTGCGCTCGAGTCGATCCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATGTCGGATTGGGTGGGAATGTCAGGGACGTTTGAATGTGC‑TGGTGGCGGGGGGAGGATTCGCACTATTGAAGttggtgctggacgtttt                                                                                                                                                                                               >  1:198589/1‑285 (MQ=14)
                                                                                                    tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGGCCTCTCGCTGATGCTCGAGTCGGACCTTGGTCGTAGCTTCTAATCCTTCCCCGGCTGGGGG‑GAATATGTTATTTCGGCTTCGTTGCCACAGTCAGGGGCCTTGATAAGTGAGGGGTGGTGGGGG‑ATGATTCGCGCGTGCGAAGCAGATGCCGGCCGAtttt                                                                                                                                                                                              >  1:258350/1‑300 (MQ=14)
                                                                                                    tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTa                                                                                                                                                                                              >  2:381728/1‑301 (MQ=255)
                                                                                                                  tggagttcagacgtgtgctcttccgatctgCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCtt                                                                                                                                                                                <  2:425570/272‑1 (MQ=255)
                                                                                                                   cATGGGCAGAATATTTGATTGCGGAGTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGactgtaaatctgccgtcatc                                                                                                                                                                               <  2:295126/301‑20 (MQ=255)
                                                                                                                       ggCAGAATATTTGATTGCGGTTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGc                                                                                                                                                                            <  2:308922/300‑1 (MQ=255)
                                                                                                                            aagatgtGATTGCGGATTCGCTTGAGAGTACAGAGACTGTTTAAAGTAATGGTGGTGGGGGAGGGATTACTCCGCGCGGCGTCCTTCGCCCTTCGCGTCGTTGCCGGCGGCCACTCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCg                                                                                                                                                                      <  1:171064/295‑1 (MQ=18)
                                                                                                                               ttttGATTGCGGATTCGCTGGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGa                                                                                                                                                                   <  2:517607/300‑1 (MQ=255)
                                                                                                                                               gCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAACGTGA‑TGGGGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCGGAGTTACAGTCTGCTCCAttagataggactcgcgtcatgtagggaatga                                                                                                                                                   >  1:425049/1‑272 (MQ=18)
                                                                                                                                                        ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAAttt                                                                                                                                          >  2:232665/1‑301 (MQ=255)
                                                                                                                                                                 ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAACTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCCCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAAt                                                                                                                                 >  2:126855/1‑301 (MQ=255)
                                                                                                                                                                      aaaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTTCGGATTCGTTGTGAAGTTCAGGTACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGCTTCGAACCTTCGAACTTGATGACGGCAGTTTTACAGGCTCCTCCCTTTGTCCGCCCGGGACCCcccccatgtgcacttaaaagttggatgtccacg                                                                                                                               >  1:532895/1‑271 (MQ=17)
                                                                                                                                                                          tGATGGGGGTGGGGGGAGGATTACTCAGCGCGGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTga‑g                                                                                                                         <  2:18390/299‑1 (MQ=255)
                                                                                                                                                                             tggtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GAtggt                                                                                                                    <  2:172281/301‑1 (MQ=255)
                                                                                                                                                                                tggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GAtggtggt                                                                                                                 <  2:198816/301‑1 (MQ=255)
                                                                                                                                                                                tggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATCGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGGTTTACAGTATGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTACTACCAATTTTGTGGTCATGCTTGA‑GAaggtagg                                                                                                                 >  2:205298/1‑298 (MQ=255)
                                                                                                                                                                                         aaGGATTTCTCATCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAg                                                                                                         <  2:36566/300‑1 (MQ=255)
                                                                                                                                                                                           ggATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGC‑TGGTGGTGGGGGAAGGATTCGACCCTGCGAAGTCGATGACTGCAGATTTAAAGTCTGCTCCCTTTTGCCGCTCGGGCACCCCACCATGGGTAATTCGAAGTTTGCGGTAACGATTGAGGATGGT‑GTGGGGTCAGGat                                                                                                      >  1:458358/1‑301 (MQ=18)
                                                                                                                                                                                                 cTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCCAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATtcg                                                                                                >  2:179326/1‑301 (MQ=255)
                                                                                                                                                                                                    cgcgcTGTGCGCTTGGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATtcgtc                                                                                              <  1:126692/299‑1 (MQ=255)
                                                                                                                                                                                                                 tCGCCGTTCAGGTGGTTGCCAGCGGCATAGCTCGCTAGCTGGCGCTCCAGTCGAACGTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAc                                                                                <  1:381282/301‑1 (MQ=255)
                                                                                                                                                                                                                    cccTTCGGGCAGTTGCCTGCGGAAACGCTCTCTCGCTGGCGCTCGAGTTGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTGGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCAccc                                                                              <  2:592595/300‑1 (MQ=255)
                                                                                                                                                                                                                           ggTCGTTGCCTGCGGCAACGCTCTCTCGCTGGTGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGc                                                                       <  2:258663/300‑1 (MQ=255)
                                                                                                                                                                                                                                            acgtgtgctcttccgatcTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑Ac                                                      <  2:159215/282‑1 (MQ=255)
                                                                                                                                                                                                                                              gCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGttt                                                  >  2:359781/1‑300 (MQ=255)
                                                                                                                                                                                                                                                tctctcGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTTGGAGGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTtctc                                                <  2:28137/301‑1 (MQ=255)
                                                                                                                                                                                                                                                               cGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑Acagaccggaagagcgtcgggta                                 >  1:159018/1‑280 (MQ=255)
                                                                                                                                                                                                                                                                    cGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCCAATTTTTAGTTAATGCTTCA‑CATGGTGGTGGGGGAAGGCTTATTCGTCGCTTCGCTCCTCCCCCTTCGGGCCTTTGCCTGTGGCACAGGTCCTCTC‑CTTTCCCtccaatcga                             >  1:413437/1‑300 (MQ=37)
                                                                                                                                                                                                                                                                       aCCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑AAGTTCTCTCGCTTTCGCCCGAATCGAAc                           >  2:387404/1‑299 (MQ=255)
                                                                                                                                                                                                                                                                              tCGAAGCTTCTCATCCGTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCg                   <  1:359380/300‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 aagtgtctaATCGTGCCCCGGATGGGCA‑GAATATTTAAGGGTGAATTCGTTGGGGAGGTCAGGGTCGTTTGAAAGTGA‑AGGGGGTGGGGGAAGGATTCGAACCTTCGAAGACGATGACGGCAGATTTAAAGTCTGCTCCCTTTGGCCGATCGGGAACCCCACCAGGGGTAATTCAAATTTGGAGGTCATGCTTGA‑GAAGGTAGTGGGGGAAGGATTATTCGTCGCATCGCTCCTCACGCGTCGGGACGTTGACTGTGGAA‑ACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAgg               <  2:545131/296‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      tctcATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTAGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTTCTCTCGCTTTCGCTCGAATCCAACCTTATTCGAAGGTtcg           >  1:539618/1‑299 (MQ=255)
                                                                                                                                                                                                                                                                                       ctcATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCa         <  2:533580/301‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       ctcATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCa         >  2:283619/1‑301 (MQ=255)
                                                                                                                                                                                                                                                                                             cTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGT‑GATGGGGGTGGGGGGAGGATTATTCGTCGCTTCGCTCCTCTCCCTTGGGGCCGTTTCCTGTGGCA‑ACGTTCTCTGGCTTTCGTTCGACCCGAACCTTAGTCGAAGGACCACACCCttt   >  2:20649/1‑300 (MQ=38)
                                                                                                                                                                                                                                                                                              ttCCCCG‑ATGGGGACGAATATTTAAGTGTGGATTCGTTGGGAATTTCAGGGACGTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTACCTTTGGCCGCTCGGGCACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTcc  <  1:232383/301‑1 (MQ=38)
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                          
GTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCA‑GAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGA‑TGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTAATTCAAATTTTGAGGTAATGCTTGA‑GATGGTGGTGGGGGAAGGATTATTCGTCGCTTCGCTCCTCACCCTTCGGGCCGTTGCCTGTGGCA‑ACGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCC  >  NC_000913/1286893‑1287479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.