| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,296,268 | T→C | 26.9% | intergenic (+474/+168) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,268 | 0 | T→C | 26.9% | 51.8 ‑0.5 ‑0.1 | 101 | intergenic (+474/+168) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): new base (16/9): ref base (35/27): total (54/47) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.32e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.72e-01 | ||||||||||
Only 100 of 101 total aligned reads displayed.
TATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑A‑‑C‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAA > NC_000913/4295973‑4296561 | tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCCTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCCGACAGCGCAATAGCCTGACTTATCGTGATTTTTTAGGTCGGATAAGGCGTTTACGccc > 2:1306970/1‑299 (MQ=12)tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTATCGTTATTTTGTAGGTCGAATAAGTCGTTTACGCCg > 2:646367/1‑300 (MQ=18) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTCTCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTCCGCCAGCCAGCGCAATGACCTCATTTAGCGTGATTTTTGAGGTCGACTAAGCCGTTTCGGCCGCATCCg > 2:1119746/1‑301 (MQ=11) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATAAGGCCTACGCCCGACAGCGCACTAGCCCGATTTCGCGTGCTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCg > 2:1498192/1‑301 (MQ=255) cctctgccaaaccgctcataaGCCTGTTTGAGTGTTGTTTGTTAGGTCTGATAAGGATTTTATCCCGCATCCTACATCAACGCATGCGGCGCCGCGTACCGCGTCTTATCTGCCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACTCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGAc < 2:1378661/281‑1 (MQ=11) ccTCCGCCAGACAGCGCAATTGCAGGATTTAGCGTGATCTTGTAGGTCGGATAAGGCGGTTACTCCGCACCCGACATCAACGCGTGATGCGACGCTTGCGGCGGCTTATCAGGCCTACGCCATACAGAGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGAc < 2:503418/301‑1 (MQ=11) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCAAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGATCGCATAAGGCGTTTACGCCGCATCCGAcgt > 2:660530/1‑298 (MQ=255) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATCAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATCAGGCGTTTACGCCGCATCCGACAta > 2:1467096/1‑300 (MQ=25) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTTATTTAGCGTGATTTTGTAGGTCGGATCAGGCGTTTACGCCGAATCCGACAt > 2:1166888/1‑300 (MQ=25) tgcgggccAGCGCAATGGTCTGATTTAGCGTGATTAGGGAGGGCGGAAAATGTGTTACAGCCGGCTCCAACAACAAGGCGTGAGGGGACGGGTGCCGCGTCTCATCAGGCCGACGCGAGACAGGGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGGCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATc < 2:1071841/293‑1 (MQ=11) aaaCAGCGCAAGAGCTCGGTGTAGGGGGATTTTGTAGGTGTGATAAGGCGTGTACGCCGCATCCGAAAGCAACGCCTTATGCGACGCGTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAGGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGc < 1:987751/299‑1 (MQ=11) aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATCGCCTGCTTTAGCGTGTTTTTGTAGGTCGGCTAAGGCGTTTATGCCGCATCCGACATCAACGCCTGCTGCGACTCTTACCGCGTCTTCTCAGGCCTCCCCCAGACCTACCCATAACATGATTTAGCCTATTTTTGTAACGCGGAACACGCTTTTCACCCCCATCCGACATCactg > 1:1369553/1‑297 (MQ=11) gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGGCTTATCAGGCCTACGCCAGACAGGGCAATAGCCTGATTTAGCGTGAGTTTGTCGGTCGGATAAGGCGTTTCCGCCGCATCCCCCATAAATGCCTGag > 1:18821/1‑300 (MQ=255) ctaaaTTGCTTGATTTAGGGTGATTTTGTCGGTCGGATAATGCTTTTACGCCGCACCCGACACCAACGCCTGATTCGACGCCTGCCGCGTCTTATCAGGCATACGCCAGCCCGCGCAATAGCCTGATTTATCGTGATTGTGTAGGTCGGATAAGGCGTGTAGGCCGCATCCGACAGCAACGCCTGAGGCGACGCTTAACGCGTCTCATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCTTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATg < 2:357540/298‑1 (MQ=11) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGAGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATACGACATCAACGCCTGATGCGACACTTAACGAGTCTTATCAGGCATCCTCCAGACAGCGCAATAGCCTACTTTAGCGTGATTTTTTACGTCGGATAAGGCGCTTCTGCCGCATCCGACATCAACTCCTg > 2:1276689/1‑298 (MQ=11) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTCATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTCACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTACCGTGATTTGGTAGGTCGGATAAGGCTTTTACCCCGCATCCCACATCacaccctcgtt > 1:398585/1‑291 (MQ=11) cgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAAGCCGCATCCGACATCAACGCCTGATGCGACCCTTGCCGCGTCTTATCAGGCCTACGCCAGACACCGCAATATCCTGATTTCGCGTGATTTTGTCGGGCGGATAAGGCGTTGCTGCCGCATCCGACATCAACGCCTACAGAGACGCTTCACGCGTCTTATCATACCTACGCCCGAGCGCGAAAGACCGTGCTCTAGCGCGATGTTGTAGATCGGATGTGGCGTTGATAGAGCATACGACCTCGACACATGaaa > 1:1076959/1‑299 (MQ=2) cgaaaTAGCGTGATTGAGCGTGATTGTTGAGGTCGGATAAGGCGTTGATGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATg < 2:373117/298‑1 (MQ=255) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTCGGTCGGATAAGGCGTTTATGCCGCATCCGACCTCAACGCCTGATGCGACGCTTAACGCGTATTATCACGCCTCCGCCAGACAGCGCACTATCCTGATCTCGCGTGATTTTGTCGGTCGGATCCGGCTTTTCCGCCGCCTCCGCCCTCACTGCCTGATGCgcct > 1:657087/1‑296 (MQ=11) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGATTAACGCGTCTTATCAGGCCTACGCCAGACATCGCACTAGCATGATTTAGCGTGATTTTGTAGGTCGGATAAGGAGTTTACGCCGCATCCGCCactcatgcctgcacaggcg > 1:275673/1‑281 (MQ=11) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATAAACGCATGATGCGACGCTTGCCGCGTCTTCTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTTTAGGTCGGATAAGGCGTTTATGCAGCATCCGCCATCAACGCCTGATGAGACGCTTAACGAGTCTTATCAGCCCTACGCCAAACCACAACATAGACTGATTTGGCGTACTTTTGTAGATCGAGTAAGGCACTGAGGCCGCACCCGActagaatgccgtctgcgaaccttcc > 2:1570158/1‑276 (MQ=11) aTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATAAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTGGTATCAGGGGTTTCTGCAGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAACGCAATAGCATGATTTAGCGTGCTTTTGTAGGGCGTGTAAGCCGTCTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTaac > 2:1492254/1‑298 (MQ=11) ggtactggcccgttcagccccACCCGACATACACGCTGAATGCACCGCTTGCCGCGTCTTATCAGGCATAGCCAACACAGCTCAATAGCCTGAGTTGGCGTGATTGTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTatct < 1:37446/283‑4 (MQ=11) gATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGCCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGGTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGCCATCAATTCCTGATGCGACTCTTGCCGCGTCTTGTCCGGCCTatcttac > 2:1453122/1‑294 (MQ=11) gATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCAGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTCAGCGTGATTTTGTAGGTTGGATCAGGAGTTTACGCCGCATCCGACCTCAATGCCTGATGCGGGGCTTGCCGCGTCTTAtacggtctctcataa > 2:1323812/1‑286 (MQ=11) ggCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCTTCTTATCAGGCCtctct > 2:37448/1‑288 (MQ=9) tCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATc > 2:253487/1‑267 (MQ=14) tttGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGCTGCGACGCTTGCCGCGTCTTATCAgg > 2:332469/1‑301 (MQ=18) ataactcggtgacgCCGCACCCGACATAAACCCCTGAGGCGACTCGTGCCGCGTCTTAGCAGGCCTACGCCAGACAGCGCAATAGCCCGATTGAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAGGCCGCATCCGACATCAACGCCTGAGGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAcc < 2:1369602/288‑1 (MQ=11) gacaggTTTACGCCCCATCGGACACCAACGCCGGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCTCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg < 2:381404/295‑1 (MQ=11) atgggactaagggacagtctgaactCAACGGCGGATGGGACGATGGCCGTGGCTGATCAGGCTGACGCCAGAGAGCGAAATAGTATGAGTTAGCGGGAGGTTGTAGGGCGGAAAAGGCGTTCAGGCCGCATCCGACATCAACGCCTGATGCGACGATTAACGCGTCTTATCAGGCCTACGCCAGAAAGCGCAATAGCCTGATTTAGCGTGATTGTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAGCGTAAcc < 1:102157/275‑1 (MQ=11) aaGGCGTTTACGCCGCATCCGACATCAACGCTTGATTCGACGCGTGCCGCGTCTTATCAGGCCTACGCCATACAGCTGAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAcc < 2:275677/299‑1 (MQ=11) ggCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTAGGTAGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCACCATCAATGCCTGCTGCGACCGTTGCCGCGTCTTATCAGGCCCATCTTACCCGTTg > 1:357821/1‑301 (MQ=11) cGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCCGTCCTATCTTAACCGTTGGt > 2:570851/1‑301 (MQ=255) cATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGAAATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATTCCTGATGCGCCGCTTGCAGCGTCCTATCAGGCCTATCTTAACCGTTGGTTAATTTTTcca > 2:1311620/1‑299 (MQ=11) tCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGCCAGCGCACTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCTTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCTTCTTTTCCGGCCTATCTTACccctgtctcttctacccatc > 2:102160/1‑282 (MQ=11) accgcaaTCAACGCCTGATGCGCCTCTTGCCGCGTCTTATCAGGCCGAAGCAAGATGGCGAAATAGCCTGATGTGGCGTGATTTTGTAGGTCGGAGAAGGCGTTTATGCCGCATCCAACATGAACGCCTGATGCGACGCTTAACGCGTCGTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc < 2:446051/295‑1 (MQ=11) aTCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCCACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTTGTCGGTCGCCTAAGGCGTTTCCG‑‑C‑‑C‑GCCTCCCCCATCATTGCCTGCTGCGCCCCCTTCCTCCTCTTATCAGGCCTATCCTCCCCTTTCGTTCACTTTTACAActccca > 1:548272/1‑297 (MQ=1) tCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTGATCAGGCCTATCCTAACCGTTGGTTAATTTTTCAAACTCTTca > 2:852433/1‑300 (MQ=255) tCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGCTAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCTTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAACCTCTTca > 2:423885/1‑300 (MQ=255) ccGCCGGGTGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACAcc < 2:18822/300‑1 (MQ=255) acgcctgtgggtaCGCTTGCCGCGGCTTATCAGGCCTACGCCAGACAGCGCAATAGCCGGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACAcc < 2:1030272/289‑1 (MQ=14) cGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGGTGCGACGATTAACGCGTCTTCTCAGGCCTACGCCAGACAGCGCAATAGCCTGATATAGCGTGATTTTGTCGGTCGGATCAGGCGTTT‑‑ACGC‑‑C‑GCATCCGCCATCCATGCCTGCACCGACTCTTTCCGCGTCTTAGACGGCCAAACTTAACAGTAGGTCTATTTTTCACACTCTTCCCAcc > 1:485007/1‑300 (MQ=11) gATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGAAATCCATGCCTGATGCGACGCTTGCAGCGTGTTATCGTGCCTATCTTAACCGTTGGTTAATTTTTCAAAATCTTCACACCCGGTaa > 1:545997/1‑300 (MQ=14) tgggtgagttggccgcgTCGTATGAGGCCAAAGCTGGACAGCGAAATAGTCTGATTTGGCGTAAGTTGGTAGGCTGGATAAGGCGTTTATGCCGCATCCGGCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATc < 1:435786/288‑1 (MQ=14) gtgaaaagagacaggaTCAGGCCTACGCCAGAAAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTAGGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAcc < 2:512752/285‑1 (MQ=14) tgccgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCATATCTTACCCGTTGGTTACTTTTTCAACCTCTTAACACCCGCTATCAAACCCTTc > 2:551882/4‑300 (MQ=14) ccggggtgtagaaGGCCGAAGCAAGACAGAGACATAGCCTGATTGAGCGGGATTGTGTAGGTAGGAGAAGGCGTTTAGGCCGCATCCGAAATAAACGTCGGAGGAGACGCTTAAAGAGGAGTATCAGGCCTACGCAAGAAAGCGCAATAGGCGGAGTTAGCGTGAGTGTGTAGGTAGGATAAGGCGGTT‑‑ACGC‑‑C‑GCAGCCGACAGCAAGGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCGTAACCGTTGGTTAATTGGTCAAACGCGCCACACCCGGTATCAAACCCGTCCaa < 2:1232426/289‑2 (MQ=9) ccgcgTCGTAGCAGGCCTAAGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTGTGTAGGTCGGATAATGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCAt < 2:1177913/300‑1 (MQ=255) tggtgagaagagacagaCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCAGCCGACAGCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACGCTTCACACCCGGTATCAAACCCTTCCATAc < 2:178730/285‑1 (MQ=17) ccgTCTCATCAGGCCTACCCCATACAGCGCACAAGCCTGTTTTAGCGTGAGTTTGTCGGTCGGATAAGGCGTTTTTGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 2:546006/300‑1 (MQ=17) ccgTCGTATCGTGCCTAAGCACGACAGCGGAATAGCCTGATTTAGCGTTGTTTTGTAGGGCGGATAAGGCGTTTAAGCCGCATCCGACATCAACGCCTGAGGTGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTGGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 2:1455965/300‑1 (MQ=17) gggttttttaGGCCTACGCCAGACCGGGCAATGGCCGGATTTAGCGTGATTTTGTAGGTGGGAGAAGGCGTTTATGCCGCATCCGACATCACCGCCGGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 1:570842/291‑1 (MQ=17) gggtttATCAGGCCTACGCAGTAAGGCGCAACAGCCTGATGTAGGGGGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 1:160420/296‑1 (MQ=17) gaggaaagcAGGGCTACGGCAGAGAGCGCAATAGGCTGATATAGCGTGGATTGGGAGGTGCGATCAGGCGTTGAGGACGAATCTGACATCAACGCCTGATGCGACGCTTAACGCGTGTGATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATGTTGTAGGTCGGATAAGGCGGTT‑‑ACGC‑‑C‑GCAGCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 1:1306921/292‑1 (MQ=17) cgtctggacAGGGCTACGCAAGACAGGACAATGGCCTGATTTAGCGGGATTTTGTAGGTCGGATAAGGCGTGTAGGCCGCAGCCGAAATCAACGCCTGATGCGACGCTTAACGCGGCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGTTAGCGGGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 2:784323/292‑1 (MQ=17) cggcttatcacgcttcacccAGACAGCCCAATAGCCTGCTTTAGCGTTATGTTTCAGGTCCGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTAACAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATATTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑TCATCCGACATCTATGCCTCATGCGACGCTTGCCGCGGCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 2:1264223/282‑1 (MQ=17) cgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTATGCCAGACCGCGCAATAGCCTGCTTTAGCGTGATTTTGTAGTTCGTATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACCTCAATTCCTTATGCGACGCTTGACGACTAGTTTCCGGCCTATCTTAACCGTGAGGTAATTTTTGAAACTCTTACCACCCGTTATCAAAcacactcattc > 1:1264176/1‑290 (MQ=11) tATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTCCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCCTCCGACATCACTGCCTGATGCGACGCTTGCCGCGTCTTATCATCCCTCTCTTAACCGTTGGTTAATTTTTCCAACTCTTCCCACCCGGTATCAAACCCtttctcttatacca > 1:512743/1‑289 (MQ=14) cggcgctatgccacaaggcgtAATAGCCTGATTTTGCGTGCTTTTGTAGGTCGGATAAGGCGTTTATGCGGCCT‑CGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCTTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGtt < 2:437195/284‑1 (MQ=17) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGCTAGCGCAATAGCCTGATTTAGCTTGATGTTGTAGGTCGGATAAGTCGTTT‑‑ACGC‑‑C‑GCATACGACAGCAATGCCTTATGCGACGCTTTCCGCGTCTTGTCAGGCCTATATTACCCGTTGGTTAATTTTTCAAACTCTTCACACCCGGCACCAACCCCTTCCATACCGCTCAGGtta > 1:1130682/1‑300 (MQ=14) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCCTCCTACCTCAATGCCTGATGCGACGCTTGCCGCTTCTTCGCAGGCCTATTCTAACCGTTGGTTCATTCTTCACACTCTTACCTACCGGTCTCAACCCCTTCCATACTTCTCAGGtta > 1:1071264/1‑300 (MQ=11) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTACCCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAACCCCTTCCATAc > 1:265223/1‑290 (MQ=255) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACAGTTGGTTAATTTTTCCACCTATTCACACCCGGTCTCGAACCCTTCCATACAGCTCCGGtt > 2:1145296/1‑300 (MQ=14) ggCCTACGCCAGACAGCGCAATAGACTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAc < 2:265228/290‑1 (MQ=255) ggCCTACGACAGAAAGCGCAATGGCTGTATGTAGCGGTGTTTTGTAGGTCGGGTAAGGCGTTTAGGCCTCATCTGACATCAACGCCTGATGCGACGCTTAGCGCGTCTTATCAGGCCGACGCCAGACAGCGCAAGAGCCTGAGTTAGCGTGATTTTGTAGGGCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGtt < 1:1498135/300‑1 (MQ=17) tcggacAGACAGGCAAATAGCCGTATTTAGCGTGATGTTGGAGGTCGAATAAGGCGTTTATGCGGCCTCCGACATCAACGCCGGATGCGACGCTTAACGCGGCTTATCAGGTCTAAGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGGTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAcc < 1:1453066/296‑1 (MQ=17) tagggcAGACAGCGCAATAGCCGGATTTAGCGGGATTTTGTATGTCGGATAAGGCGGTTATGCCGCAGCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCAAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAGAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAcc < 1:852420/296‑1 (MQ=17) aaCGACAGACAGGGCAATAGCCGGAGTGAGCGTGATTTGGTAGGGCGGATAAGGCGCTTATGCCTCAGCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAAGAGCCTGATTGAGCGTGATTTTGTAGTTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAcc < 2:657097/300‑1 (MQ=17) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATGAACGCCTGATGCGACGCTTAACGCGTCTTATGAGGCCTACGCCAGACAGCGCAATAGCATGATTTAGCGTGATTTTGTCGGTCGGATAAGGAGTTT‑‑A‑‑CGAC‑GCATCCGACACAAAGGCATGATGCGACGATGGAAGCGGCTTAGCAGGCATATCTTAACCGTGGGTTAATTTTGCAAAATCTTCACACCAGGCATGAAACCATGCCATAAGGCACAGGTTCAAcaa > 2:325111/1‑299 (MQ=14) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACACTTGCCGCGCCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAGACTCTTCACACCCGGTATAACACCCTTCCCTACAGCTCCGGTTCACCCa > 1:1399604/1‑301 (MQ=17) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGTTTTAGCGTGATTTTGTAGGTCGGATAAGTCGTTT‑‑ACGC‑‑C‑GCATCCGACCTCAATGCCTGATGCGACGCTTGCCGCGTCTTATTAGGCCTATCTTAACCGTTTGTTAATTTTTCAACCTCTTCACACGCGGTATCAACACCTTCCCTCCAGCTCAGGTTCAAcaa > 2:806640/1‑299 (MQ=14) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTcctgtctctaca > 2:73598/1‑290 (MQ=255) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGCCGCTTGCCGTGTCTTATCAGGCCTACCTTAACCGTTTGTTAATTTTTCAAACTCTTCACACCCGTTGTCACACCCTTCCATAcctgtttcttatccaca > 1:178726/1‑285 (MQ=14) aCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGACGTTTATGCCGCATCCGCCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCATGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑TCATCCGACCTCAATGCCTGCTGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTACTTTTTCCAACTCTTCCTCCACGGTATCACTCCCTTCTATACATCTCTGTTTCCAcc > 2:1438084/1‑300 (MQ=14) aGACAGGGCAATAGCCTGATTTAGCGTGAGTTTGTAGGTCGGATAAGGCGTTTACGCCGCATACGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGt < 2:1425109/232‑1 (MQ=255) aGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATACGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGACTATCTTAACCGt > 1:1425055/1‑232 (MQ=255) aaaGCGCAATAGCCTGCTTCAGCGGGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGAGGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGc < 2:1130725/296‑1 (MQ=255) gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGACTGCTTTAGCGTGATTTTGTAGGTCGGATACGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCACTGCCTGATGCGACGATTGCCGCGTCTTATCAGTCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTTCAAAACCCTGCCATCCGGCGCAGGTTCAACAATTTCAgccc > 2:1461730/1‑298 (MQ=14) gcgcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGATTAACGCGGATTATCAGGCCTAAGCCAGACAGAGGAATAGCCTGCGTGAGCGAGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCATGATGCGAAGCTTGCCTCGTCTTATCATGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACATCCGGCATCAAACCCTTCACTACACCTCAGGTTCAACCACTGCAgaga > 2:714042/1‑297 (MQ=17) gcgaAATAGCCTGATTTGGTAGGATTTTGTATGTATGAGAAGGCGGTTATGCCGGAACCGAAATCAACGCCTGATGCGACGCTTAACGAGGCTGATCAGGCCTACGCCAGACAACGGAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAgcgc < 2:535653/300‑1 (MQ=18) aTAGCATGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGACTGATAAGGCTTTT‑‑ACGC‑‑C‑GCATCCTGCATCAATGCCTGATGCGACGATTGCCGCTTCTTCTTAGGCCTATCTTCACCGTTGCTTAATTCTTCCAACTCTTCACACCCGGTATCACCCCCTTCCCTACAACCTATGTTACACCAGTGCGCCGCCttttt > 1:959615/1‑300 (MQ=14) gtgggttatggggTGATGTTGTGGGTCGGATAGGGCAGTTACGCAGAATCCTACGTCGACAGCTGATGCGAGAGGTAGCGTGTCGTATAGGGCGTAAGCCAGACAGCGCAATAGCCTGATTTAGCTTGATTTTGTAGGACGGATAATGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAAAGCCTGATGCGACGCTTGCCGCGTCTTATCAAGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTAGCt < 1:10947/288‑1 (MQ=255) gCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCACTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑A‑‑CG‑CAGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAcc > 1:994464/1‑217 (MQ=2) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGTCAGCGCACTAGCCTGATTTTGCGTGATTTTTTAGGTCGGATACGGCGTTTCCG‑‑C‑‑C‑GCCTCCGCCATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTACATAc > 2:184638/1‑263 (MQ=17) ttttCGCTTGATTTTGTAGTTCGGATAAGGCGTTTATGCCGCATCCGACAACAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCATACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGttc < 2:332279/299‑1 (MQ=255) aTTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAc > 2:208382/1‑242 (MQ=255) tttGTAGGTCGTAAAAGGCGGTTAAGCCGCATCCGACATCAACGCCGTATGCGACGCTTAACGCGTCTTAGCAGGCCGACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAAc < 2:400401/301‑1 (MQ=21) gTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATCCAGCTCTGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAACACctt > 2:568254/1‑301 (MQ=255) tttggttAAGGCTGTTATGCCGACTCGGACATAAAATCCGGAGGTGACGCTTACAGCGTCGTATCAGGCCTACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTGGTAGGTCTGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCTACATCAAGGCCTGATGCGACGCTTGCCGCGTCTAATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCttcttc < 1:1119703/295‑1 (MQ=255) cGGATAAGGCTTTTAGGCCGCATCCGACCTCAACGACTGACGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGGAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTTATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCGTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCAc < 2:1071307/301‑1 (MQ=21) ggATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTCAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTCATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTCTCAAACCCTTCCATACATCTCAGGTTCACCCACTCCAGCGCCTTTTCCTTGTTTTTCTCCATAAAACCTTCTACAc > 1:807161/1‑300 (MQ=18) ggAGAATGCGGTTATGACGCCTCCGACATCAACGCCTGATGCGACTCATAACGCGTCTTATCAGGCCCACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGCTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCAc < 2:722342/300‑1 (MQ=21) tcGTTTATGCCGCAACCGAAACCAGCGCCGGGTGGGACGCTTAACGTGTTTTATCATGCCTACGCCAGAAAGCGCAATGGCCTGATTTAGCGTGATTGTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAGTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAg < 1:646358/300‑1 (MQ=21) cgattATGCCGCATCCGACATCAACGCCTGAGGCGACGCGTAACGCGACTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGAGTTAGGGTGATTGTGTAGGTCGTGTAAGGCGTTTGCG‑‑C‑‑C‑ACATACGCCATCAATTCATAATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTCAATTTTTCAAACTCTTCACACGCGGTATTAAACCCCTCCATAACGCTTAGGCTACACAAGATCAGCGCCTTATGCTTCATCTTCTCGAACAATCCATCTACCCCTTTTAAGa > 1:166591/4‑301 (MQ=12) cGTTTATGCCGCATCCGACATCAACGCCGGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAg < 2:62540/300‑1 (MQ=255) cGTTTAGGCCGCATCCGACAACAACGCCGGGTTCGACGCTTAGCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAg < 1:568245/300‑1 (MQ=255) tgttATGCCGTAGCCGACATCACACACGGATGAGACTATTAATGGTGCGTATCAGGCCTACGCCAGGAAGCGCAATAGGCTGAGTGAGCGGGATGTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATGTTGCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGaa < 2:967523/299‑1 (MQ=21) tttATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAAAGCTCAGGTTAAACCAGTGCAGCGCCTTTTTCTTGTTTGTCTCGCTAAAACATTCTTCACCGTTTAAGaa > 2:1327508/1‑300 (MQ=21) tttATGCCGCAACCGCCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGaa < 2:1399655/300‑1 (MQ=255) | TATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑A‑‑C‑‑C‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAA > NC_000913/4295973‑4296561 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |