| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 300,196 | A→G | 100% | F247L (TTC→CTC) | paoC ← | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 300,196 | 0 | A | G | 97.8% | 153.1 / ‑4.0 | 46 | F247L (TTC→CTC) | paoC | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (32/13); total (33/13) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.26e-01 | |||||||||||
AAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTA‑GAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGTCAAAGTCACCGACGTTTTTGTCGGGCGTGTCTTCCGGCGGCTGATTGACGG > NC_000913/299907‑300489 | aaaTCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTA‑GAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCCGCGCATCGCTTCTCAGGAGCCGCTTgccg > 2:1096694/1‑300 (MQ=255) cccGGTAGGACGCGTCCCCCCGGCTGT‑GGGTAATTCCTTTTGCTTGACCGCCGTTTCCGGGTGGCCGCCTGGCAGGTTTCCAGCCCAGCTTTCATTGGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGAAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACggg < 1:1096664/300‑1 (MQ=255) ccGTTATGAGCATTCGCCCCCGCGTATGTGT‑ATTCGCTTTGCGGTACCGTCGTTGCCGGCGGGCCGCCGGACTGGTTGCCAGACCAGTTTGCATGTGAGATAGCGGTGACTGTCCTGTTTTTGTCGGAACCGATACGAAATTGCTGAAGGGTGGCGGGGCGTCTCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCTCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACggg < 2:783169/300‑1 (MQ=255) ggTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGGTAATACGCCCATTCTCCACGGGAACTTTCAGCGTTTTTGCCCGATCGGGTCGGCACCAGACAGACATCTGATTTGAGGTCCAGGGGGCAAGCTTCTTTCAATCCCAGACGGCCATcca > 1:852017/1‑299 (MQ=255) gCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCACACCCTCCGCCGATATACGGGGAGATAATACGCTCATTCTCCACGGGAACTTTCAGCGTTTTTGACAGATCGGTGCGGCCCCGGGCCATCCTCTGATTTGGGGTCCAGAGGGTAAGCTTATTTCCATCCCCGGCGGACATCGAGGCATGCGGCTCCATCGCCaa > 2:1080356/1‑300 (MQ=255) gcggggcggTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTTCGGTCCAGAGGGTAAGCTTATTTCCATCCCCGACGCCCATCGAAGCACGCGGCCCCCGCCCCATATGCCTCTggg > 1:1069309/1‑300 (MQ=255) ggggggTGCGGGGTGTTAGTGGGAATAGAGGGGGGGGGGAGCATCACTTTACCCGGACGTTTCACCGCGCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTcc < 2:1069339/300‑1 (MQ=255) ggcggTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATCCGCACATtc > 1:1246048/1‑161 (MQ=255) gctcggagatgtgtataagagcgagggggCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCGCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCgggg < 2:1539337/275‑1 (MQ=255) gtgggtgtgggttttGGGAATGGAGGGGCGGGGGAGCCTCACGTTAACCGGACGGTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCTCCGATATAAGGGGAGATAATACGCTCATTCGCCACGGGAACTTTCAACGGTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGt < 1:1080326/287‑1 (MQ=255) gtgtTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATACTACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCCATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCAATCGCCATATGGCTCTTGTCCGGGGGCgtgtgtg > 2:886460/1‑298 (MQ=255) gtgtTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCTAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTCTTTCCATCCCAGACGGCCATCGAGGCATGCGGCGCCATGGCACTATGGCTCTGGGCCGGGGACGGgaagg > 2:575296/1‑301 (MQ=255) ggggataggagctgggagGGGGGGGGGGCCATCACTTTAACCGGCCGTTGCCCCGCTCGGGCGGCGAGGGCCCCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTgtag < 1:1052373/285‑1 (MQ=255) gtTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCCTGCGGCTCCCTCTCCCTATGTCTCTGGTCCGGTGTCGTgttggtg > 2:1359145/1‑300 (MQ=255) aTTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTTAGGTCCagag > 2:569875/1‑216 (MQ=255) gggAATAGAGGGGCGGGGGAGCATCCCTTTAACCGGACGTGTCACCGCGCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGc < 1:1148368/272‑1 (MQ=255) gggAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGc > 2:1148401/1‑272 (MQ=255) gAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATCTACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTTCGGCCCCAGTCAATCATCTGATTTCAGGTCCAGAGGGTAAGCTTCTTTCCATCCCCGACGGCCACCGCGGCCTGCGGCCCCCTCGCCCTATGGccctctcccgggtccggttcgctcgcccccc > 1:9174/1‑273 (MQ=255) gAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGCTCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCCTGCGGCTCCATCGCCCTATGGCTCTGGTCCGGGGTCGTGTCGGTAGCATcgaa > 1:853866/1‑298 (MQ=255) gAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGTTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGACTCTGGTCCgtgtgctgttgggttgcctcca > 1:1338486/1‑279 (MQ=255) gAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCACCATATGGCTCTGGTCCGGGGTCTCGTAGGTAGAATCAAt > 2:997929/1‑301 (MQ=255) gAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTACATCGCCATATTGCTCTGGTCCGGGGTCGTGTAGGTAGCATaaa > 2:306564/1‑300 (MQ=255) gAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCAGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGATTGCGGCTCCATCGCACTATGGCTCTGGTCCGGGGTCGTGTAGGTAGCCTCAAt > 2:340690/1‑301 (MQ=255) aagagagGGGCGGGGGAGCATCACTTTAACCGGACTGTGCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCTCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATc < 2:1338526/298‑1 (MQ=255) tAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCAACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCCGTCAATACTCTGGTTTGAGGTCTCGAGGGTAAGCTTATTGCCATACCAGACGGCAATCGAGGGCTGCGGATCCATCGCCGTCTGGCCGTGGTCAGGGGGCG‑gtaggctaggctccacctt > 2:42897/1‑287 (MQ=255) gagGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCGTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGGgtagctgtctcttttaccca > 2:1052402/1‑285 (MQ=255) ggggCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTTCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCCTGCGGCTCCATCGCCATATGGCTCTGGTCCgggg > 1:1539293/1‑275 (MQ=255) ggggAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGTCACTCAAGGCTTGCGGCTc > 2:726830/1‑243 (MQ=255) ggggAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGACCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGACGCCAAACCCTCCGCCGATCTACGGGGCGATAATACGCACATTCTCAACGGGAACTTTCAGCGTATTTGACGGTTCGGTGCGGCCCCAGTCAATCCTCTGATTTGAGGTCCAGAGGGTATGCTTATTTCCATCCCAGATGGCCATCCAGGCATGCGGCTCCATCCCCATATGGCTATTGTCCGGGGTCGCttaggt > 2:877363/1‑279 (MQ=255) gCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGTTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATACCCGACGGCCATCGCGGCATGCGGCTCAATCGCCATATGGCTCTGGTCAGGGGTGGTGTAGGTAGCATCAACCTTCACCGACGCGGCGGt > 2:939673/1‑301 (MQ=255) cACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGACCCAGTCAATCATCTGATTTGAGGTTCCGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATGAATCTTCGCCGCAGCGGAGGTGcaa > 2:863028/1‑301 (MQ=255) cTTTACCCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCAGCGCGTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGc < 2:853877/301‑1 (MQ=255) cTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCCCAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGACCTTTCAGCGTTTTTGCCCGATCGGTGCGGCACCAGTCAATCATCTGCTTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGGCGTGTAGGTAGCATCAATCTTCACCGCCGCGGTGGTGAAAg > 2:317860/1‑300 (MQ=255) ttgtctCACCGCGCGGGCGGCGAGGGCCGCGAGCAGCGGATCGCTTCTCAGGAGCAGCTTGCCGACAAACCCGCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTGGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGTCAAAg < 1:886449/296‑1 (MQ=255) cGTTTCCCCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGc < 1:1386155/235‑1 (MQ=255) cGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGCGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGc > 2:1386196/1‑235 (MQ=255) gTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCCTCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGCAAAAGt > 2:61894/1‑300 (MQ=255) gcgAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCACCATCGCCATATGGCTCTGGTCCGGGGTCGTTTAGGTAGCATCAACCTTCAACGCAGCGTGGGTAACAGCCCCGTCAAAGTCAACGACGTTTTTGTAgg > 1:1070674/1‑301 (MQ=255) cgccAGCAGCGCATCGATTTCAAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGTCAAAGTCACCGACGTTTTTGTCGGGCGTGTCt < 2:9174/301‑1 (MQ=255) cagcGCATCGCTTCTCAGGAGCAGCTTTCCGCCAAACCCTACGCCGAGATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGTCAAAGTCACCGACGTTTTTGTCGGGCGTGTCTTCcgg < 2:852028/300‑1 (MQ=255) cATCGCTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTATGTAGCATCAATCTTCACCGCAGCGGCGGTCAACGCCCCGTCaacatc > 2:1292972/1‑261 (MQ=255) cTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGTCAAAGTCACCGACGTTTTTGTCGGGCGTGTCTTCCGGCGGCTGATTGa > 2:849560/1‑301 (MQ=255) cTTCTCAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGCTCGTGTAGGTAGCATCAATCTTCCCCGCAGCGGCGGGGAAAGCCCCGTCAAAGCCACCGACGTTTTTGTCGGGCGGGTCTTCCGGCGGCTGATTgg > 1:1172492/1‑300 (MQ=255) tctcAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCAATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGTCAAAGTCACCGCCGTTTTTGTCGGGCGTGTCTTCCGGCGGCTGATTGagg > 2:955377/1‑299 (MQ=255) tctcAGGAGCAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGAGCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCCATCTTACCCGCAGCGGTGGTGAAAGCCCCGTCAAAGTCACCGACGTTTTTGTCGGGCGTTTCTTCCGGCGGCTGATTGGCg > 2:703373/1‑301 (MQ=255) ctcAGGAGCAGCTTGCCGCAAAACCCTCCGCCGATATACGGGGAGATAATACGCCCATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACAAGTCAATCATCTGATGTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCCGACGGACCTCGAGGCATGAGGCTCCATCGCCTTATGGCACAGGTCCGGGGTCGTGTAGGGAGCATCAGTCTTCACCGACGCGGCGGTGAAAGCACAGTCCAAGTCACCGACGTTTTTTTCGGGGCTGTCCTGCGACGGGTggtagaagg > 1:446012/1‑293 (MQ=255) | AAATCAAGCGTGGCGAGCCGCAGGCCGGTATGACGATTCGCCCCGGCGTA‑GAGTAATTCGCTTTGCTGTACCGCCGTTTCCGGCGTGCCGCCGGGCAGGTTTCCAGACCAGCTTTCATGTGAGATAGCGGTGATTTTCCCGCTCTGGTCGGCACCGATACGCAAGTGCTGAAGGGTGGCGGGGCGGTGCGTGGTGTTATTGGGAATAGAGGGGCGGGGGAGCATCACTTTAACCGGACGTTTCACCGCTCGGGCGGCGAGGGCCGCCAGCAGCGCATCGCTTCTCAGGAACAGCTTGCCGCCAAACCCTCCGCCGATATACGGGGAGATAATACGCACATTCTCCACGGGAACTTTCAGCGTTTTTGCCAGATCGGTGCGGCACCAGTCAATCATCTGATTTGAGGTCCAGAGGGTAAGCTTATTTCCATCCCAGACGGCCATCGAGGCATGCGGCTCCATCGCCATATGGCTCTGGTCCGGGGTCGTGTAGGTAGCATCAATCTTCACCGCAGCGGAGGTGAAAGCCCCGTCAAAGTCACCGACGTTTTTGTCGGGCGTGTCTTCCGGCGGCTGATTGACGG > NC_000913/299907‑300489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |