Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	4,038,402	0	T→G	100.0%	1.2	1	noncoding (884/2905 nt)	rrlA	23S ribosomal RNA of rrnA operon
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/1):  ref base (0/0):  total (0/1)

AAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACCGCCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCCCAGACAGCCAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGTTGTTG  >  NC_000913/4038395‑4038702        |                                                                                                                                                                                                                                                                                                             aaGGGGGGCAACGCGAATAAAAAACACGAGGAAAACGGGGAAGACCTGAGAAGGGGATTACGGGAGAAGAACGGGTGGGGCGAAGTGACGTCGTGAAGATGGAAACAACCCAGACCGCTCGCTAAGGTCCTAAAGTTATGGTTAAGTGTGAAACGATGTGGGAAGGCCCAGACATCCAGGATGTTGGCGTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACACTAtgt         <  1:538861/301‑1 (MQ=11)        tCATCCCGACATACCCACCCGAGGCAAAATGCTAATACCGGAGAATGTTAGCACGGGTGACACACGGCTGGTGCTAACGTCCGTCGGGAAGAGGGAAACAACCCGGGCCGGCAGGTAAGGTCCCAAAGTCATGGTTAAGGGGGAAACGATGTGGGAAGGCACAGACAGCCATGAAGGTGGCTTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGttgttg  <  1:678622/301‑1 (MQ=11)        |                                                                                                                                                                                                                                                                                                             AAGGGGGTCATCCCGACTTACCAACCCGATGCAAACTGCGAATACCGGAGAATGTTATCACGGGAGACACACGGCGGGTGCTAACGTCCGTCGTGAAGAGGGAAACAACCCAGACCGCCAGCTAAGGTCCCAAAGTCATGGTTAAGTGGGAAACGATGTGGGAAGGCCCAGACAGCCAGGATGTTGGCTTAGAAGCAGCCATCATTTAAAGAAAGCGTAATAGCTCACTGGTCGAGTCGGCCTGCGCGGAAGATGTAACGGGGCTAAACCATGCACCGAAGCTGCGGCAGCGACACTATGTGTTGTTG  >  NC_000913/4038395‑4038702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.