New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 793868	57 (0.990)	4 (0.070)	4/564	NT	6.6%	coding (777/789 nt)	modE	transcriptional repressor for the molybdenum transport operon modABC
	?	NC_000913	= 793876	58 (1.040)					coding (769/789 nt)	modE	transcriptional repressor for the molybdenum transport operon modABC

TGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/793568‑793868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcgtgATTATCGCCACGCTGTGCTAAGCGTGTTGACAATTTGTTATGAAACACGTATCCCTGTCAGTAATCGCTGCACAAAGTGGGATATAAAATGTCATCGTTGCAAATTTTGCAAGGCACGTTTCGTCTTAGCGACACAAAAACGCTGCAATTGCCTCAGCTAACGTTAAACGCGGGTGATAGTTGGGCGTTTGTCGGTTCGAATGGAAGCGGGAAATCGGCCCTGGCCCGCGCGCTGGC  <  NC_000913/793876‑793640                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ctCTCGGAGGGGGGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTG                                                                                                                                                                                                                                               <  1:88488/299‑1   CTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGAa                                                                                                                                                                                                                                             >  2:88612/1‑300                  gtgggTGTGGGAAAACTGGTTTTGCCGTCAACCTTTCAAAAGGGGAAGTTCCCCCGCCGGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCAGTCGAACCGACAAACGACCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTGGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGATTATCGCCACGCTGTG                                                                                                                                                                                                                              <  1:638248/296‑1                   gtgttttgtgataacgtGCTTTGCCGTTCACCTTGCAAAAGCGTAAGTTCCCCCGCCAGCGGGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATAGCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGGGATTATCGCCACGCTGTGC                                                                                                                                                                                                                             <  1:38842/284‑1                                                                                                                                                                                                                     CGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTGCTAAGCGTGTTGACAATTTGTTATGAAACACGTATCCCTGTCAGTAATCGCTGCACAAAGTGGGATATAAAATGTCATAGTTGCAAATTTTGCAAGGCACGTTTCGTCTTAGCGCCACAAACACGCTGCCATTGCCTCACCTAACGTTAAACGCGGGTACTAGTTGGGCGTATGCAGGTTCAAACGGAAACAGGA                           >  1:436864/1‑301                                                                                                                                                                                                                                              TGCATCGATTACTGACAGGTATACGTGTTTCTTAACAAATTGTCAACACGCTTAGCACAGCGTGGCGATAATCACGCTGTGCTAAGCGTGTTGACAATTTGTTATGAAACACGTATCCCTGTCAGTAATCGCTGCACAAAGTGGGATATAAAATGTCATCGTTGCAAATTTTGCAAGGCACGTTTCGTCTTAGCGACACAAAAACGCTGCAATTGCCTCAGCTAACGTTAAACGCGGGTGATAGTTGGGCGTTTGTCGGTTCGAATGGAAGCGGGAAATCGGCCCTGGCCCGCGCGCTGGC  <  2:437428/301‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGCTCGAAGGAGAGACGAGTGATGTGGGAAAACTGGCTTTGCCGTTCACCTTTCAAAAGCGGAAGTTCCCCCGCCAGCGCGCGGGCCAGGGCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGCGTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTATATCCCACTTTGTGCAGCGATTACTGACAGGGATACGTGTTTCATAACAAATTGTCAACACGCTTAGCACAGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/793568‑793868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagcgtgATTATCGCCACGCTGTGCTAAGCGTGTTGACAATTTGTTATGAAACACGTATCCCTGTCAGTAATCGCTGCACAAAGTGGGATATAAAATGTCATCGTTGCAAATTTTGCAAGGCACGTTTCGTCTTAGCGACACAAAAACGCTGCAATTGCCTCAGCTAACGTTAAACGCGGGTGATAGTTGGGCGTTTGTCGGTTCGAATGGAAGCGGGAAATCGGCCCTGGCCCGCGCGCTGGC  <  NC_000913/793876‑793640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.