New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4294253 | 102 (1.390) | 3 (0.040) | 3/600 | 9.7 | 2.8% | intergenic (+114/‑228) | nrfG/gltP | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG/glutamate/aspartate:proton symporter |
? | NC_000913 | = 4294270 | 104 (1.420) | intergenic (+131/‑211) | nrfG/gltP | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG/glutamate/aspartate:proton symporter | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below cutoff threshold. |
ACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCATTGAGCTGCATAAAAAATAATCGAATGAACATATGCCAAAAATAATCACTAATCAGTATTATTGCAGATTAAACAAATAAAAATCTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4293961‑4294253 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAACCATTTGTTATGGAAAGATTTTTATTTGTTTAATCTGCAATAATACTGATTAGTGATTATTTTTGGCATATGTTCATTCGATTATTTTTTATGCAGCTCAATGACATAATCT < NC_000913/4294270‑4294154 ACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCATTGAGCTGCATAAAAAATAATCGAATGAACATATGCCAAAAATCATCACTAATCAGTATTATTGCAGATTAAACAAATAAAAATATTTCAATAACaa > 2:560966/1‑299 ATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCATTGAGCTGCATAAAAAATAATCGAATGAACATATGCCAAAAATAATCACTAATCAGTATTATTGCAGATTAAACACATAAAAATCTTTCAATAACCATTTGTTATGGAAAGATTTTTATTTGTTTAATCTGCAATAATACTGATTAGTGATTATTTTTGGCATATGTT > 1:320188/1‑301 CGAGTTAACCGAAAACTGTTGGTTAAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATATGGTGATGAAGATTATGTCATTGAGCTACATAAAAAATAATCGAATAGACATATGCCAAAAATAATCACTAATCAGTATTATTGCAAATTAAACAAATAAAAATCTTTCAATAACCATTTGTTATGGAAAGATTTTTATTTGTTTAATCTTCAATAATACTGATTAGTGATTATTTTTGGCATATGTTCATTCGATTATTTTTTATGCAGCTCAATGACATAATCT < 2:320187/300‑1 ACAGTAATGAAATCACCGCCCTGATGCTGCTGGCTTCCGATGCGTTTATGCAGGCGAACTACGCGCAAGCCATCGAACTATGGCAAAAAGTGATGGATCTCAACTCACCGCGAGTTAACCGAACACAGCTGGTTGAGTCGATTAATATGGCGAAATTGTTGCAGCGGAGATTGGATTAATCATCTGGTGATGAAGATTATGTCATTGAGCTGCATAAAAAATAATCGAATGAACATATGCCAAAAATAATCACTAATCAGTATTATTGCAGATTAAACAAATAAAAATCTTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4293961‑4294253 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATAACCATTTGTTATGGAAAGATTTTTATTTGTTTAATCTGCAATAATACTGATTAGTGATTATTTTTGGCATATGTTCATTCGATTATTTTTTATGCAGCTCAATGACATAATCT < NC_000913/4294270‑4294154 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |