New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	52 (0.740)	8 (0.120)	6/528	8.6	12.8%	coding (305/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	= 1209602	60 (0.910)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

AAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACGGGTAGTTA  >  NC_000913/1207519‑1208099                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                         aaaaCCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                                                                                                                                                                            >  1:110256/1‑301 (MQ=255)                   aagtgcgcggcgGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAg                                                                                                                                                                                                                                                                         <  2:110136/292‑1 (MQ=255)                                   ataaCGGTTATACCCGTGGTAAACCACAGACCGGCACGACTGCCACCGATCTGGATGATGACTACTTTGACATGTAGCAGGAGGAACTTTGCAGCGTGGTGGATGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CAt                                                                                                                                                                                                                                                        <  3:447966/299‑1 (MQ=255)                                        ggTTTTGACCGTGGTAACCCCCCGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACAGGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCta                                                                                                                                                                                                                                                   <  4:437200/301‑1 (MQ=255)                                                  gcgtcaaaccccAGACCTGCACGCCTGCCACCGATATGTATGCTGACTACTTGGACAGGTTGCAGGTGGAAGTGTGCATGGTGGTGGAGTCATCCGGTACCAGCCGGGATAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGAAAGAATCCGTTTGGCGATATCAGATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTAt                                                                                                                                                                                                                                         <  3:262670/293‑1 (MQ=255)                                                   tGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTAtt                                                                                                                                                                                                                                        >  3:450626/1‑300 (MQ=255)                                                     gTAACCCCCAGACTGGCACGCCTGCCACCGCTCTGGATGATGACTACTTTGACATGTTGCCGGAGGAACTTTGCAGCGAGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGCTACTTACCGCACTTCGCGCGCTGCCGTTAGGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTCGGGAGCAGGACCACAACTCAATGCA‑GCAACGTCTACATTAGGACCCACCGCTTT‑CACAGCTATCCCGGTTATGAt                                                                                                                                                                                                                                      >  3:411994/1‑301 (MQ=255)                                                                 ccGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTg                                                                                                                                                                                                                           >  3:165681/1‑300 (MQ=255)                                                                         ccTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATc                                                                                                                                                                                                                    >  3:126893/1‑299 (MQ=255)                                                                                  gATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                                                                                                                                                                                         >  4:356513/1‑301 (MQ=255)                                                                                      tGGATGATGACTACTTTGGCATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATg                                                                                                                                                                                                                                        <  3:446598/266‑1 (MQ=255)                                                                                      tGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATg                                                                                                                                                                                                                                        >  4:446608/1‑266 (MQ=255)                                                                                       ggATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt                                                                                                                                                                                                      <  4:70250/299‑1 (MQ=255)                                                                                          ggatgaCTACTTGGACAGGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAATGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggggg                                                                                                                                                                                                 <  3:356506/300‑1 (MQ=255)                                                                                          atgtggctactGTGACATGTTGCAGGTGGAACGTGGCAGCGGGGTGGAGGCCTCCGGTGCCAGCCGGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggggg                                                                                                                                                                                                 <  3:238875/295‑1 (MQ=255)                                                                                             tgaCTAATTTGACATGTTGTAGGAGGAAGGGGGAAGAGAGGTGGAGGCAGCCGGAGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                                                                                                                                                                              >  4:204537/1‑301 (MQ=37)                                                                                              gaCTACTGTGCGATGTTGCGGGAGGAACTTTGCAGGGTGGTGGAGGCATCCGGTGCCAGCCTGGGGAAGGGGCGGCACGACCAGTTACTTAGAGAACTTCGAGCGCTGCTGTTGAGCCGCAAGAATCAGTTTGGAGATATCAAATCAGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGAAAAACTCAAAGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                                                                                                                                                                                             <  4:139347/301‑1 (MQ=255)                                                                                                   ctTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                                                                                                                                                                                         >  1:162066/1‑300 (MQ=255)                                                                                                      tGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                                                                                                                                                                                      <  4:126894/300‑1 (MQ=255)                                                                                                                cAGGAGGAACTTTACCGCGGGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCGGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt                                                                                                                                                                            <  2:117452/300‑1 (MQ=255)                                                                                                                            ggCAGCGTGGTGGAGGCATCCTGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTGACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg                                                                                                                                                               <  3:204534/300‑1 (MQ=255)                                                                                                                                   gggtggAGGCAGCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCACGCGCTGCTGTTAAGCCGCAAGAATCCGTTTAGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGAACGCACCGGTTT‑CATAACTATACCGGTTATGATTGGTGGTATTGAGCGATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGaaa                                                                                                                                                        <  4:412004/300‑1 (MQ=255)                                                                                                                                                cGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                                                                                                                                                                          <  4:403956/160‑1 (MQ=255)                                                                                                                                                cGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                                                                                                                                                                          >  3:403946/1‑160 (MQ=255)                                                                                                                                                                       ggcACGACCAGTTACGTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCt                                                                                                                     <  2:161859/300‑1 (MQ=255)                                                                                                                                                                          aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTgtgt                                                                                                                 <  4:450636/301‑1 (MQ=255)                                                                                                                                                                                   tacttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCgttgt                                                                                                        >  4:259824/1‑301 (MQ=255)                                                                                                                                                                                                tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCgg                                                                                                                                       >  3:74433/1‑257 (MQ=255)                                                                                                                                                                                                tCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCgg                                                                                                                                       <  4:74434/257‑1 (MQ=255)                                                                                                                                                                                                 cgcgcgCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACa                                                                                          <  1:153269/301‑1 (MQ=255)                                                                                                                                                                                                   cgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAAt                                                                                        >  3:401456/1‑301 (MQ=255)                                                                                                                                                                                                                     cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGCGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATCATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATTTCAGCGCACCTATCa                                                                        >  1:151760/1‑299 (MQ=255)                                                                                                                                                                                                                       aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTTCACATTATGACAATGTCCGCTCACCTATCAATGc                                                                    >  3:307749/1‑301 (MQ=255)                                                                                                                                                                                                                       aGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCCCCTATCATTg                                                                     >  2:87594/1‑300 (MQ=255)                                                                                                                                                                                                                             gttcagacgtgtgctcttccgaactcACTGTGCAAACGGCTCTAGAAAACCTTGGGTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATGCCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAAGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTgg                                                               <  1:93678/275‑1 (MQ=255)                                                                                                                                                                                                                                 tGGGGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAAc                                                           <  3:259820/300‑1 (MQ=255)                                                                                                                                                                                                                                   gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGAATTGCCGCAAAAGCATCTGCTCCTGGGGGGGATGGAATAACAGTGGTATCCCCGGTTGCGTTAAATATTGCTTTTGTTGCGGTTTTTGCAATTTATGCCAATTTCAGCGCCCTTATAAATGCATGGGCAACggg                                                        >  4:451740/1‑301 (MQ=255)                                                                                                                                                                                                                                            aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGctatc                                                >  2:117270/1‑299 (MQ=255)                                                                                                                                                                                                                                                      cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCCGTggagatcggaagagcggcgtgtagggaa                                     >  2:93574/1‑275 (MQ=255)                                                                                                                                                                                                                                                               cttcattttcataaaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTttatt                             >  4:387988/13‑300 (MQ=255)                                                                                                                                                                                                                                                               aaacgcgctcGGAAACCGTTGGTTGGGAGAAGGGACAAAACTCAAAGCAGGCAAC‑GCTACCTTAAGGAGGACCGGTTTCCATAG‑TATTACGGGTATGGATGGGTGTATTGGGGCATCAGTAATTAATCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTttatta                            <  3:451730/294‑1 (MQ=255)                                                                                                                                                                                                                                                                aCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAGCAGTAATCATTCAGTGGGGGGGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTAc                           <  1:117403/301‑1 (MQ=255)                                                                                                                                                                                                                                                                  ggCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACgg                         <  4:401466/301‑1 (MQ=255)                                                                                                                                                                                                                                                                  catgttcataaaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACgg                         <  3:387981/292‑1 (MQ=255)                                                                                                                                                                                                                                                                        cataaaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTgcgcc                   >  3:268905/4‑300 (MQ=255)                                                                                                                                                                                                                                                                          aaaaCCTGGGTTTGGGAGAAGGGGAAAAACACTATGCA‑GTAAAGGCTACATTAGGACGGACCGGTTT‑CAGAGCGATACCGGTGATGCGTGGTGGTATTGAGCAATGAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCGGCCTCTGGGGGGGAGTGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGc                 <  2:151567/301‑1 (MQ=255)                                                                                                                                                                                                                                                                               cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTTCGCAGCTCaaa            >  2:22247/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                        ggAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGCCATTGTCAGCGCACCTGTCAATGCAGTGGCAACGGGTGGATATACAACCACTTCGTTTTTATTACTGTTCCCATCTCAAACGGGTAGtt   >  3:398271/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                        ggACAAGGAGAAAAAGTCAAAGCA‑GCACCGGCGACTTTAGTGAGTACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCGCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACGGGTAGtt   <  3:12479/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                         gagaAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAACCGGGTAGttt  >  4:12479/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                              ggAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGAc                                                                                           >  4:254479/1‑207 (MQ=255)                                                                                                                                                                                                                                                                                              ggAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGAc                                                                                           <  3:254475/207‑1 (MQ=255)                                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                                                         AAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCA‑GCAACGGCTACATTAGGACGCACCGGTTT‑CATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCTCAAACGGGTAGTTA  >  NC_000913/1207519‑1208099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.