New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2319247130 (1.100)3 (0.030) 3/284 13.0 2.4% coding (630/2850 nt) rcsC hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
?NC_000913 = 2319264 125 (1.120)coding (613/2850 nt) rcsC hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
Rejected: Position hash score below cutoff.

Only 100 of 132 total aligned reads displayed.

CCTGCATCCAGCGAGGATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATT  >  NC_000913/2319060‑2319436
                                                                                                                                                                                            |                                                                                                                                                                                             
ccTGCATCCAGCGAGGATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa                                                                                                                                                                                   >  1:591327/1‑200 (MQ=255)
               gATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                    <  1:317411/200‑1 (MQ=255)
                    cccTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCgg                                                                                                                                                               >  1:275388/1‑200 (MQ=255)
                        tAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCt                                                                                                                                                           >  1:742409/1‑200 (MQ=255)
                            tttACTTTCTGGTCCGGTAAGCGAAATCAGGTTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                       <  1:205109/200‑1 (MQ=255)
                                       gTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  1:839141/200‑1 (MQ=255)
                                       gTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  1:320126/200‑1 (MQ=255)
                                       gTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  1:433725/200‑1 (MQ=255)
                                          cGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAAcg                                                                                                                                                                                           >  4:555060/1‑150 (MQ=255)
                                                gCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaa                                                                                                                                                                                     >  4:351942/1‑150 (MQ=255)
                                                 cGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGc                                                                                                                                  <  1:248427/200‑1 (MQ=255)
                                                   aaaTCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt                                                                                                                                                                                  >  4:50438/1‑150 (MQ=255)
                                                   aaaTCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAc                                                                                                                                                             <  1:50437/171‑1 (MQ=255)
                                                         gggTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCa                                                                                                                                                                                              >  3:759529/1‑132 (MQ=255)
                                                         gggTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCa                                                                                                                                                                                              >  3:907982/1‑132 (MQ=255)
                                                         gggTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTAc                                                                                                                                     >  1:445541/1‑189 (MQ=255)
                                                           gTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAAc                                                                                                                                                                                            >  3:220638/1‑132 (MQ=255)
                                                           gTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAAc                                                                                                                                                                                            >  3:506440/1‑132 (MQ=255)
                                                              tGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTtg                                                                                                                     <  1:726134/200‑1 (MQ=255)
                                                                aCCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAgt                                                                                                                                                                     <  4:595485/150‑2 (MQ=255)
                                                                 ccATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTgtgg                                                                                                                  <  1:373686/200‑1 (MQ=255)
                                                                    ttttCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTaaaaa                                                                                                                                                                                   >  3:13022/1‑132 (MQ=255)
                                                                     tttCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAt                                                                                                                                                                                  <  3:689568/132‑1 (MQ=255)
                                                                      ttCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCAt                                                                                                             <  1:143675/200‑1 (MQ=255)
                                                                        catcaAGAATGGTAACCCCCATCGGCAACGTACCCGTAAAGAAAAAGTTCTCAACCCGG‑TTGTCTGGCTGGACACCAAAAGGGGCTGGCAACCGGTTCGCAGGATAAACTGGCGTCAACGCGTAAAAAAACCGGACGCAAg                                                                                                                                                                      >  2:826523/1‑141 (MQ=255)
                                                                        catcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAATTTCTCCATCCGGATTGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAc                                                                                                                                                             <  4:462546/150‑1 (MQ=255)
                                                                        catcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAc                                                                                                                                                             <  4:244138/150‑1 (MQ=255)
                                                                         atcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATAccc                                                                                                                                                                              <  3:503576/132‑1 (MQ=255)
                                                                          tcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                    <  2:239255/141‑1 (MQ=255)
                                                                          tcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                    <  2:479461/141‑1 (MQ=255)
                                                                              gAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                       <  4:589595/150‑1 (MQ=255)
                                                                                aTGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCa                                                                                                                                                                       >  3:284892/1‑132 (MQ=255)
                                                                                 tGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGAtattta                                                                                                  >  1:812438/1‑200 (MQ=255)
                                                                                     aaCCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGa                                                                                              <  1:740092/200‑1 (MQ=255)
                                                                                       cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                       >  2:820917/1‑141 (MQ=255)
                                                                                       cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  1:147647/200‑1 (MQ=255)
                                                                                       cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  1:399492/200‑1 (MQ=255)
                                                                                       cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  1:237712/200‑1 (MQ=255)
                                                                                         cccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  4:437508/150‑1 (MQ=255)
                                                                                         cccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  4:70287/150‑1 (MQ=255)
                                                                                         cccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCg                                                                                          <  1:97882/200‑1 (MQ=255)
                                                                                           cATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAcc                                                                                                                                                            <  3:306958/132‑1 (MQ=255)
                                                                                           cATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAcc                                                                                                                                                            <  3:149104/132‑1 (MQ=255)
                                                                                            aTCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATc                                                                                                                                                  <  2:176635/141‑1 (MQ=255)
                                                                                            aTCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAgg                                                                                                                                         <  4:776777/150‑1 (MQ=255)
                                                                                                gCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGc                                                                                   <  1:158868/200‑1 (MQ=255)
                                                                                                gCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGc                                                                                   >  1:865992/1‑200 (MQ=255)
                                                                                                  aaCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  2:149302/141‑1 (MQ=255)
                                                                                                  aaCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  2:213684/141‑1 (MQ=255)
                                                                                                  aaCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  2:411103/141‑1 (MQ=255)
                                                                                                   aCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTaga                                                                                                                                           >  2:237625/1‑141 (MQ=255)
                                                                                                     gTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAgg                                                                                                                                         <  2:652606/141‑1 (MQ=255)
                                                                                                     gTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAgg                                                                                                                                         <  2:792599/141‑1 (MQ=255)
                                                                                                     gTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCg                                                                                                                                >  4:189394/1‑150 (MQ=255)
                                                                                                       aCCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACATTCGCTGATCCa                                                                                                                                                >  3:854248/1‑132 (MQ=255)
                                                                                                           ggTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  3:487073/132‑1 (MQ=255)
                                                                                                           ggTAAGAAAAAGTTCGCCAGCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAGACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                            <  3:3722/132‑1 (MQ=255)
                                                                                                            gTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTatcat                                                                                                                         <  4:644682/150‑1 (MQ=255)
                                                                                                              aaGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCt                                                                                                                       >  4:629131/1‑150 (MQ=255)
                                                                                                               aGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                    <  4:674088/104‑1 (MQ=255)
                                                                                                                gAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                       >  4:511013/1‑116 (MQ=255)
                                                                                                                gAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCGGATCCAGTa                                                                                                                                             >  2:255099/1‑126 (MQ=255)
                                                                                                                gAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACAACCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCt                                                                                                                              >  2:490161/1‑141 (MQ=255)
                                                                                                                aaaaaaGTTCTCCATCCGGATGGGCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCCACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                       <  1:511063/115‑1 (MQ=255)
                                                                                                                       ttCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCt                                                                                                                       <  2:348011/141‑1 (MQ=255)
                                                                                                                        tctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCCGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGc                                                                                                                               >  3:377992/1‑132 (MQ=255)
                                                                                                                        tctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATGCAGTCGAGGTTACTGCCGCTAGCATCTTGTGGTGCAt                                                                                                             >  4:480691/1‑150 (MQ=255)
                                                                                                                        tctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  1:480738/167‑1 (MQ=255)
                                                                                                                         ctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTtg                                                                                                                     <  2:654139/141‑1 (MQ=255)
                                                                                                                         ctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTtg                                                                                                                     <  2:455293/141‑1 (MQ=255)
                                                                                                                           ccATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGAGTAAAAATACCCGACGCAAGGGCGCCGCCCTTCGCTGATCCCGTAGAGGGTAATGCCCCTATCATCTTGTGGTGCATTTc                                                                                                          >  4:851234/1‑150 (MQ=255)
                                                                                                                            cATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTgtgg                                                                                                                  <  2:906698/141‑1 (MQ=255)
                                                                                                                             aTCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGa                                                                                                        >  4:514727/1‑150 (MQ=255)
                                                                                                                                cGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAGCTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGGCCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCt                                                                                                                       <  3:323054/132‑1 (MQ=255)
                                                                                                                                cGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGTCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCa                                                                                                              >  2:505757/1‑141 (MQ=255)
                                                                                                                                 ggATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGtt                                                                                                                                       >  1:164729/1‑115 (MQ=255)
                                                                                                                                       tCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTgtggtg                                                                                                                <  3:46435/132‑1 (MQ=255)
                                                                                                                                       tCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGACAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCa                                            <  1:799773/200‑1 (MQ=255)
                                                                                                                                            cTCGACACCCAAAAACGCCTGCAACCGGTTCACCAGATAAACTGGCGTCAACGCGTAAAAATACCCGGCGCCAGAGCGCGGACCTACGCTGATCCAGTAGAGGTAACTGCCGCTATCATCTTGTGGTGCATTTCGAtattt                                                                                                   <  2:832204/141‑1 (MQ=255)
                                                                                                                                              cGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTc                                                                                                          <  3:557529/132‑1 (MQ=255)
                                                                                                                                               gACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGAtatttatt                                                                                                <  2:110392/141‑1 (MQ=255)
                                                                                                                                                acacCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGa                                                                                                        >  3:661066/1‑132 (MQ=255)
                                                                                                                                                   cccAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  2:552186/141‑1 (MQ=255)
                                                                                                                                                   cccAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGc                                                                                   <  4:368622/150‑1 (MQ=255)
                                                                                                                                                        aaGCGCCTGCAAACGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGAtatttatt                                                                                                <  3:861217/132‑1 (MQ=255)
                                                                                                                                                            gcaagCAACCGGGTAGCCAGATAAACAGGAGGAAACGCGTAAAAATACCCGACGCGAGGGAGCGGACCTTCGCTGATAGAGAAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  3:209450/128‑1 (MQ=255)
                                                                                                                                                            gcCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  3:175813/132‑1 (MQ=255)
                                                                                                                                                            gcCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  3:772220/132‑1 (MQ=255)
                                                                                                                                                             ccTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            >  1:800228/1‑131 (MQ=255)
                                                                                                                                                             ccTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                            <  4:800162/131‑1 (MQ=255)
                                                                                                                                                                   aCCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAgg                 <  1:596114/200‑1 (MQ=255)
                                                                                                                                                                     cGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGc                                                                                   <  3:237615/132‑1 (MQ=255)
                                                                                                                                                                          cGCCAGATAAACTGGTGTCAACGCGTAAAGATACCGGACGCGAGAGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGc                                                                              <  3:882342/132‑1 (MQ=255)
                                                                                                                                                                               gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCa                                                                         >  3:463331/1‑132 (MQ=255)
                                                                                                                                                                               gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCa                                                                         >  3:691734/1‑132 (MQ=255)
                                                                                                                                                                               gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTAt                                                                >  2:547575/1‑141 (MQ=255)
                                                                                                                                                                               gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTAt                                                                >  2:41247/1‑141 (MQ=255)
                                                                                                                                                                                 tAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAAc                                                                       <  3:716159/132‑1 (MQ=255)
                                                                                                                                                                                  aaaCTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAAcg                                                                      >  3:386032/1‑132 (MQ=255)
                                                                                                                                                                                      tGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCat                                                <  4:249434/150‑1 (MQ=255)
                                                                                                                                                                                            |                                                                                                                                                                                             
CCTGCATCCAGCGAGGATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATT  >  NC_000913/2319060‑2319436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.