New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2012857 =	86 (0.760)	4 (0.040)	4/286	11.8	4.7%	coding (158/315 nt)	fliE	flagellar basal‑body component
	?	NC_000913	2012911 =	83 (0.790)					coding (104/315 nt)	fliE	flagellar basal‑body component
Rejected: Position hash score below cutoff.

TCACTTCCTGATACGCCGCCACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAGGCGCTAAATAGCAACAAAAAAAC  >  NC_000913/2012717‑2013095                                                                                                                                                                                                   |                                                                                                                                                                                         tcaCTTCCTGATACGCCGCCACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGTGCGCGGCGTGCAGCTGCCCGGCaaaa                                                                                                                                                                                     >  4:670099/1‑200 (MQ=255)    cTTCCTGATACGCCGCCACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGCGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTa                                                                                                                                                                                  >  4:573322/1‑200 (MQ=255)    cTTCCTGATACGCCGCCACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTa                                                                                                                                                                                  <  4:725187/200‑1 (MQ=255)              cgccgcCACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGtt                                                                                                                                                                        >  4:591135/1‑200 (MQ=255)                  gccACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCgg                                                                                                                                                                    >  4:382451/1‑200 (MQ=255)                  gccACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCgg                                                                                                                                                                    >  4:453303/1‑200 (MQ=255)                  gccACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCgg                                                                                                                                                                    >  4:564720/1‑200 (MQ=255)                        aGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGa                                                                                                                                                              >  4:171347/1‑200 (MQ=255)                         gCTTGTTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGAt                                                                                                                                                             >  4:656749/1‑200 (MQ=255)                         gCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGAt                                                                                                                                                             >  4:84612/1‑200 (MQ=255)                              ttaCGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTg                                                                                                                                                        >  4:553365/1‑200 (MQ=255)                                                   tGCATAGAAACTGAGGCTTTTTGCATATCCGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGTTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGt                                                                                                                                   <  4:295681/200‑1 (MQ=255)                                                     cATAGAAACTGAGGCTTTTTTCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAg                                                                                                                                 >  4:316998/1‑200 (MQ=255)                                                          aaaCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCaa                                                                                                                                                                                       >  1:440605/1‑141 (MQ=255)                                                            aCTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCaaaa                                                                                                                                                                                     >  1:441308/1‑141 (MQ=255)                                                             cTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAAc                                                                                                                         <  4:30564/200‑1 (MQ=255)                                                                   cTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATgg                                                                                                                                                                              <  1:624634/141‑1 (MQ=255)                                                                     ttttGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGAt                                                                                                                 >  4:228288/1‑200 (MQ=255)                                                                      tttGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAAc                                                                                                                                                                                    <  3:282967/132‑1 (MQ=255)                                                                         gCATATCGGTCATCACATCNNTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTg                                                                                                                                                               >  2:24553/1‑150 (MQ=255)                                                                         gCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAAcc                                                                                                             <  4:925758/200‑1 (MQ=255)                                                                           atatCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGTCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGAt                                                                                                                                                             >  2:583909/1‑150 (MQ=255)                                                                              tCGGTCATCACTGCGTTTGACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTcc                                                                                                                                                          <  2:198581/150‑1 (MQ=255)                                                                              tCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTcc                                                                                                                                                          <  2:552649/150‑1 (MQ=255)                                                                                ggTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCgg                                                                                                                                                                          >  3:318650/1‑132 (MQ=255)                                                                                ggTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCaa                                                                                                      >  4:118118/1‑200 (MQ=255)                                                                                     tcaCATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTgcgcac                                                                                                                                                   >  2:707750/1‑150 (MQ=255)                                                                                     tcaCATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATcccc                                                                                                 >  4:342425/1‑200 (MQ=255)                                                                                     tcaCATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATcccc                                                                                                 <  4:888256/200‑1 (MQ=255)                                                                                        caTCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTgcgcccgcg                                                                                                                                                >  2:855168/1‑150 (MQ=255)                                                                                          tCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTACTGGTCGGTTGCGGCAGt                                                                                                                                                                >  3:479893/1‑132 (MQ=255)                                                                                            gTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACt                                                                                                                                            >  2:316741/1‑150 (MQ=255)                                                                                              ttAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGAtt                                                                                                                                                            <  3:664799/132‑1 (MQ=255)                                                                                                aaCGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTcc                                                                                                                                                          <  3:485917/132‑1 (MQ=255)                                                                                                   gccacgccGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGCTTCCTgc                                                                                                                                                       >  3:82155/1‑132 (MQ=255)                                                                                                            ggTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGcc                                                                                                                                     <  1:312960/141‑1 (MQ=255)                                                                                                               tCACCGATAGTGAAGTTTTCTGCCGGCGTGCGGGCAGCTGTTGGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTc                                                                                                                                           <  3:541003/132‑1 (MQ=255)                                                                                                                cACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGTGCGCGGCGTGCATCTGCTCGGCAAAATTAATGGTTGGTTGCGGCATTTTTTCTTTCGCATCCCCACTCCTCGCCGTac                                                                                                                                 >  1:571167/1‑140 (MQ=255)                                                                                                                cACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCa                                                                                                                                          >  3:40088/1‑132 (MQ=255)                                                                                                                cACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACt                                                                                                                        >  2:391976/1‑150 (MQ=255)                                                                                                                  ccGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATc                                                                                                                                        <  3:722984/132‑1 (MQ=255)                                                                                                                     agagTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGcc                                                                                                                                     <  3:493009/132‑1 (MQ=255)                                                                                                                          gAATTTTTCTGCCTGCGTGCGGGCAGCTGCTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTACTGGTCGGTTGCGGCAGTGATCCCTTCGCCCGCGCACTCATCGCCGTatc                                                                                                                                >  3:64584/1‑130 (MQ=255)                                                                                                                                 tCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAAc                                                                                                                         <  3:148375/132‑1 (MQ=255)                                                                                                                                    tagttttgccgGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGc                                                  >  4:299767/10‑200 (MQ=255)                                                                                                                                        gcgtgcgGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCtt                                                                                                         >  1:303614/1‑141 (MQ=255)                                                                                                                                          gtgcgGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGt                                                                                              <  2:278988/150‑1 (MQ=255)                                                                                                                                          gtgcgGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGt                                                                                              >  2:428129/1‑150 (MQ=255)                                                                                                                                           tgcgGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAg                                           <  4:563118/200‑1 (MQ=255)                                                                                                                                            gcgGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTAt                                                                                            <  2:382426/150‑1 (MQ=255)                                                                                                                                              gggCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATcc                                                                                                   <  1:418622/141‑1 (MQ=255)                                                                                                                                                gCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATcccc                                                                                                 <  1:486766/141‑1 (MQ=255)                                                                                                                                                    cTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAAt                                  >  4:784937/1‑200 (MQ=255)                                                                                                                                                     tGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTAt                                                                                            <  1:369976/141‑1 (MQ=255)                                                                                                                                                      gTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCNNNNNNNATGGTCGNNNNNNNCAGTGATNNNNNNGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGCTAATTTCTGGTAGCAAAGCCTACCAGTAAGtnnnnnn                                >  4:494365/1‑194 (MQ=255)                                                                                                                                                       tttGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATcc                                                                                                   <  3:510044/132‑1 (MQ=255)                                                                                                                                                          gtgtATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGCTAACCCCTTCAATCCCCTGTATCGCTg                                                                                       >  1:748635/1‑141 (MQ=255)                                                                                                                                                          gtgtATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTg                                                                                       >  1:732497/1‑141 (MQ=255)                                                                                                                                                          gtgtATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTg                                                                                       <  1:31584/141‑1 (MQ=255)                                                                                                                                                              aTCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTAt                                                                                            <  3:482939/132‑1 (MQ=255)                                                                                                                                                              aTCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTAt                                                                                            <  3:370938/132‑1 (MQ=255)                                                                                                                                                              aTCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTAt                                                                                            <  3:696850/132‑1 (MQ=255)                                                                                                                                                              aTCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAgg                        <  4:272117/200‑1 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGCTACCCCCTTCAATCCCCTGTATc                                                                                           >  3:547342/1‑132 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATc                                                                                           >  3:740955/1‑132 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATc                                                                                           >  3:366833/1‑132 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACAtt                                                                                  >  1:354219/1‑141 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTcc                                                                         >  2:472703/1‑150 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTcc                                                                         >  2:62718/1‑150 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTcc                                                                         >  2:734469/1‑150 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTcc                                                                         >  2:778918/1‑150 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAg                                           >  4:601338/1‑180 (MQ=255)                                                                                                                                                               tCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGCCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAGgc                       >  4:551219/1‑200 (MQ=255)                                                                                                                                                                cACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCg                                                                                          <  3:241759/132‑1 (MQ=255)                                                                                                                                                                  cTAATGCGATTGAGCGAGGCGTGCAGCTGCACGGCAAAACTATTGGTCGTTTGCGGCCGTGATTCATGCGCACGCCCACACATCACCCTAGACTCTAACTGGCTGATAACCCCTTCTATCCCTTGTATCGCTGACATTCTCTTCTCCCgg                                                                      >  2:464180/1‑150 (MQ=255)                                                                                                                                                                   tAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTg                                                                                       <  3:143025/132‑1 (MQ=255)                                                                                                                                                                   tAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCg                                                                              <  1:608048/141‑1 (MQ=255)                                                                                                                                                                      tGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAGGCGCTAAAt                <  4:428171/200‑1 (MQ=255)                                                                                                                                                                      tGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAGGCGCTAAAt                <  4:392001/200‑1 (MQ=255)                                                                                                                                                                      tGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAGGCGCTAAAt                <  4:738599/200‑1 (MQ=255)                                                                                                                                                                          aTCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCTCCTGTATCGCTGACATtct                                                                                >  3:190960/1‑132 (MQ=255)                                                                                                                                                                          aTCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCg                                                                       >  1:406355/1‑141 (MQ=255)                                                                                                                                                                               gcgcGGCGTGCAGCTGCCCGGCAAAAATAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGtct                                                                           <  3:705754/132‑1 (MQ=255)                                                                                                                                                                                    gcgTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAGGCGCTAAATAGCAACAAAAAAAc  >  4:944273/1‑200 (MQ=255)                                                                                                                                                                                           gCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTAcc                                             <  2:301320/150‑1 (MQ=255)                                                                                                                                                                                             tGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAg                                           <  2:383930/150‑1 (MQ=255)                                                                                                                                                                                             tGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAg                                           <  2:601286/150‑1 (MQ=255)                                                                                                                                                                                                   |                                                                                                                                                                                         TCACTTCCTGATACGCCGCCACCAGCTTATTACGCACCTGAATCCCCATTTGCATAGAAACTGAGGCTTTTTGCATATCGGTCATCACATCGTTTAACGCCACGCCGGGTTCACCGAGAGTGAATTTTTCTGCCTGCGTGCGGGCAGCTGTTTGTGTATCACTAATGCGATCGAGCGCGGCGTGCAGCTGCCCGGCAAAACTAATGGTCGGTTGCGGCAGTGATTCCTGCGCACGCGCACTCATCGCCGTAGCCTGTAACTGGCTGATAACCCCTTCAATCCCCTGTATCGCTGACATTCTCGTCTCCCGGATAATTTCTGGTAGCAAAGCCTACCAGTAAGTCAATAAGACAAAGGCGCTAAATAGCAACAAAAAAAC  >  NC_000913/2012717‑2013095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.