BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3876768	181 (1.770)	3 (0.030)	3/288	10.5	1.6%	coding (185/813 nt)	yidA	sugar phosphate phosphatase
*	?	NC_000913	= 3876814	198 (2.040)	3 (0.030)	3/288	10.5	1.6%	coding (139/813 nt)	yidA	sugar phosphate phosphatase
Rejected: Position hash score below cutoff.

Only 100 of 183 total aligned reads displayed.

GTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGT  >  NC_000913/3876576‑3876965

     gtagCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCatat                                                                                                                                                                                           <  2:175231/200‑1 (MQ=255)

                  cGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAg                                                                                                                                                                              >  2:562111/1‑200 (MQ=255)

                        gCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGtt                                                                                                                                                                        >  2:614366/1‑200 (MQ=255)

                        gCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGtt                                                                                                                                                                        >  2:333537/1‑200 (MQ=255)

                             gtACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGca                                                                                                                                                                   >  2:747193/1‑200 (MQ=255)

                             gtACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGca                                                                                                                                                                   >  2:139832/1‑200 (MQ=255)

                                      ggtgCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCAt                                                                                                                                                          <  2:399871/200‑1 (MQ=255)

                                      ggtgCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCAt                                                                                                                                                          <  2:152650/200‑1 (MQ=255)

                                        tgCGGTCCAGGGCGTTGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATAc                                                                                                                                                        <  2:804442/200‑1 (MQ=255)

                                           ggTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTGATAGCTGAGAGCAGTTTGCGCCACTGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGACCg                                                                                                                                                                                                       >  1:748760/1‑150 (MQ=255)

                                           ggTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACggg                                                                                                                                                     <  2:170642/200‑1 (MQ=255)

                                            gTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGc                                                                                                                                                    >  2:738434/1‑200 (MQ=255)

                                            gTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGc                                                                                                                                                    >  2:378503/1‑200 (MQ=255)

                                                    cGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTTTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCa                                                                                                                                                                                              <  1:612256/150‑1 (MQ=255)

                                                         aaaTGAGAACCGACTTCGCGAGAGAGTTTTTCCATGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGACTTCTGTACCAGAGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGc                                                                                                                                                                                         <  1:726501/150‑1 (MQ=255)

                                                          aaTGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGActactgcattac                                                                                                                                      <  2:285612/200‑12 (MQ=255)

                                                           aTGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCa                                                                                                                                     <  2:233245/200‑1 (MQ=255)

                                                                 aCCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACAt                                                                                                                               <  2:240440/200‑1 (MQ=255)

                                                                  ccGACTTCTCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGc                                                                                                                                                                                         <  3:223328/141‑1 (MQ=255)

                                                                      cgtCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGt                                                                                                                                                                            <  1:415559/148‑1 (MQ=255)

                                                                      cTTCGCGTGAGAGTTTTTCCAGGAAACGATAGTCTTCATAGCTGAGAGCAGTTTGCTCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCa                                                                                                                                                                                              <  4:134146/132‑1 (MQ=255)

                                                                         cgcaAGAGAGTGTTACCAGGAAACGATAGTCGGCCTAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCatat                                                                                                                                                                                           <  4:558370/132‑1 (MQ=255)

                                                                             agagagTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACggg                                                                                                                   <  2:815249/200‑1 (MQ=255)

                                                                               agagTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGt                                                                                                                                                                            <  3:428270/141‑1 (MQ=255)

                                                                               agagTTTTTCCAGGAAACGATAGTCGACATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTATTTCAGGt                                                                                                                                                                            <  3:642323/141‑1 (MQ=255)

                                                                                   tttttCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACAcc                                                                                                                                                               <  1:231613/150‑1 (MQ=255)

                                                                                   tttttCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACAcc                                                                                                                                                               <  1:208221/150‑1 (MQ=255)

                                                                                         cAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGcac                                                                                                                                                                  <  3:237722/141‑1 (MQ=255)

                                                                                             aaaCGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTCTAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCt                                                                                                                                                              >  3:293084/1‑141 (MQ=255)

                                                                                             aaaCGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTtg                                                                                                                                                                       <  4:430600/132‑1 (MQ=255)

                                                                                             aaaCGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACggg                                                                                                                                                     <  1:777750/150‑1 (MQ=255)

                                                                                             aaaCGATAGTCGTCATAGCTAAGAGCAGTTTGCGCCACGGTGCTACCATCATCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGAAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACggg                                                                                                                                                     <  1:644277/150‑1 (MQ=255)

                                                                                               aCGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTtgtg                                                                                                                                                                     >  4:270696/1‑132 (MQ=255)

                                                                                                cGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACACCACGGGCGCGAGCTGCGGCAATCGc                                                                                                >  2:89762/1‑200 (MQ=255)

                                                                                                 gATAGTCGTCATAGCTGAGATCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCAt                                                                                                                                                          <  3:585005/141‑1 (MQ=255)

                                                                                                  aTAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGAcc                                                                                                                                                >  1:95426/1‑150 (MQ=255)

                                                                                                    aGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCcg                                                                                                                                              >  1:546459/1‑150 (MQ=255)

                                                                                                      gcgtcATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTGCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACggg                                                                                                                                                     <  3:522977/140‑1 (MQ=255)

                                                                                                       cgtcATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCcgtcg                                                                                                                                           >  1:818905/1‑150 (MQ=255)

                                                                                                         tcagaacTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCAGTCATATGTAATGCAGTAGTCGGTCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGCGCACACCTGCACACGGGCGACACGTTGtt                                                                                                                                         >  1:382085/7‑150 (MQ=255)

                                                                                                         tcATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGtt                                                                                                                                         >  1:285922/1‑150 (MQ=255)

                                                                                                         tcATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGtt                                                                                                                                         >  1:425630/1‑150 (MQ=255)

                                                                                                         tcATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCa                                                                                                                            <  2:425680/163‑1 (MQ=255)

                                                                                                         tcATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAAc                                                                                       >  2:257491/1‑200 (MQ=255)

                                                                                                          cATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCAt                                                                                                                                                          <  4:100986/132‑1 (MQ=255)

                                                                                                                       aGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATgg                                                                         <  2:311776/200‑1 (MQ=255)

                                                                                                                         tttGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGgtg                                                                       <  2:19252/200‑1 (MQ=255)

                                                                                                                                  cGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGc                                                                                                                         >  3:285863/1‑141 (MQ=255)

                                                                                                                                  cGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGc                                                                                                                         <  3:43229/141‑1 (MQ=255)

                                                                                                                                    gTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATACGTAATGCATTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGCAGTTGTGCACACCTCCATCCGGGCGACCCGTCGTTAGCACGAcc                                                                                                                                >  4:415265/1‑131 (MQ=255)

                                                                                                                                    gTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCGTCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGCCCCCTCGTTAGCACGACa                                                                                                                                >  4:547020/1‑132 (MQ=255)

                                                                                                                                    gTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACa                                                                                                                                >  4:469554/1‑132 (MQ=255)

                                                                                                                                    gTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGgcag                                                            >  2:49414/1‑200 (MQ=255)

                                                                                                                                    gTGCTACCATCAGCGGCCCTCTGTAGCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGCCGCTTCCATATGCAGCTCTTTCAGGTAGTTGTCCACACCTGCAGACGGGCGACCCGTCTTTAGCACGACATTCACGCCACAGGCGCGa                                                                                                              >  1:166587/1‑150 (MQ=255)

                                                                                                                                      gCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACg                                                                                                                     >  3:468757/1‑141 (MQ=255)

                                                                                                                                         aCCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGgc                                                                                                                  >  3:338749/1‑141 (MQ=255)

                                                                                                                                            aTCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTGCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAggg                                                    <  2:607477/200‑1 (MQ=255)

                                                                                                                                             tCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGGAgggg                                                   >  2:385872/1‑199 (MQ=255)

                                                                                                                                               aGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCCAt                                                                                                   >  1:704822/1‑150 (MQ=255)

                                                                                                                                                gCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGGTTGATCGGGCAGCAGAAGGGTGcc                                                >  2:532073/1‑200 (MQ=255)

                                                                                                                                                     cTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCatat                                                                                                                                                                                           >  2:506314/1‑56 (MQ=255)

                                                                                                                                                     cTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCatat                                                                                                                                                                                           <  1:506263/56‑1 (MQ=255)

                                                                                                                                                        cTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGc                                                                                                            >  4:391542/1‑132 (MQ=255)

                                                                                                                                                        cTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGGGAAATGGTGTGATCGGGCAGCCGAAGGGTTCCATCCatat                                        >  2:428737/1‑200 (MQ=255)

                                                                                                                                                         tGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATc                                       <  2:586395/200‑1 (MQ=255)

                                                                                                                                                                    gcCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAAc                                                                                       <  3:492460/141‑1 (MQ=255)

                                                                                                                                                                     ccGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAAcg                                                                                      >  3:182278/1‑141 (MQ=255)

                                                                                                                                                                       gTTGTAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTCGTGCACATCTGCATGCGCGCGACCCGTCGTCAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCACTCGCTTTTTTAAcggccgatgcaaa                                                                           >  1:451984/1‑141 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGctc                                                                                                                                                                                    <  4:406619/45‑1 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTTGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAAcggc                                                                                    >  3:348944/1‑141 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCTCGCGCTGCGGCAATCGCAtt                                                                                             >  4:612150/1‑132 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAAcggc                                                                                    >  3:546361/1‑141 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAAcggc                                                                                    >  3:660362/1‑141 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAAt                                                                           >  1:26579/1‑150 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAAt                                                                           >  1:355144/1‑150 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGtt                         >  2:700918/1‑200 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGtt                         >  2:595586/1‑200 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGGGAAAt                                                                           >  1:324209/1‑150 (MQ=255)

                                                                                                                                                                       gTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTCTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCCTCGCTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCTATCGCAtt                                                                                             >  4:53504/1‑132 (MQ=255)

                                                                                                                                                                           tcattAATGCAGTGGTCGCACAGATGTTCCACGTGCGGCTCTTTCCGGTAGTTGTTCACACCTGCAACCGGGGGACCAGTCGTTAGCACGACATTCTAGCCACGTGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGgtg                                                                       <  1:578092/146‑1 (MQ=255)

                                                                                                                                                                            aaGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATa                    >  2:29341/1‑200 (MQ=255)

                                                                                                                                                                            aaGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATACGTTTAATa                    >  2:802903/1‑200 (MQ=255)

                                                                                                                                                                              gTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCTCGAGCTGCGGCAATCGCATTTTTAACAGCGGGTGTAATGGTTTGa                                                                    >  1:579457/1‑150 (MQ=255)

                                                                                                                                                                              gTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGGGAAAAGGtgtgc                                                                    >  1:705836/1‑149 (MQ=255)

                                                                                                                                                                               tAATGCAGTAGTAGCCGGGCTGTTCCAGATGCAGCTATTTGAGGTAGTTGGGCGCACATGCATACGGGCGACATGTCGTTAGTACGACATTCACGCAACGGGCGCGAGCTGCGGCAATCGCATTTTTAAcag                                                                                     <  4:295548/132‑3 (MQ=255)

                                                                                                                                                                                 aTGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTTTGCACACCTGCATACGGGCGACCCGTCGTTAGCACTACATTCACGCCACGGGCGCGTGCTGCTGCAATCGCATTTTTAACGGCGGGCGacaac                                                                          >  3:604026/1‑137 (MQ=255)

                                                                                                                                                                                 aTGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTTCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATCCACGCCACGGGCGCGAGCTGCGGCAACCGCATTTTTCAcggcg                                                                                   >  4:527949/1‑132 (MQ=255)

                                                                                                                                                                                 aTGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTGTAATAGCCAt               >  2:432747/1‑200 (MQ=255)

                                                                                                                                                                                    cAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGgtg                                                                       <  3:26349/141‑1 (MQ=255)

                                                                                                                                                                                    cAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGgc                                                              >  1:680271/1‑150 (MQ=255)

                                                                                                                                                                                      gtagtCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGa                                                                              >  4:502044/1‑132 (MQ=255)

                                                                                                                                                                                      gtagtCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGtgtg                                                                     >  3:686915/1‑141 (MQ=255)

                                                                                                                                                                                         gtCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCCATCGCATTTTTAACGGCGGGTGCAAt                                                                           >  4:330544/1‑132 (MQ=255)

                                                                                                                                                                                          tCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTcccc      >  2:654124/1‑200 (MQ=255)

                                                                                                                                                                                           cGCCCGGCTGTTCCATATGCAGCTCTGTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATgg                                                                         <  4:191894/132‑1 (MQ=255)

                                                                                                                                                                                            gCCCCGCTGTTCCATATGCAGCTCTTGCAGGTAGTTGTGCACACCTGCATACGTGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAg                                                      <  1:516753/150‑1 (MQ=255)

                                                                                                                                                                                             cccGGCTGTTCCATATGCAGCTCTTGCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGgtg                                                                       <  4:684650/132‑1 (MQ=255)

                                                                                                                                                                                             cccCGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGgtg                                                                       <  4:722795/132‑1 (MQ=255)

                                                                                                                                                                                              ccGGCTTTGCCATATGCAGCTCTTTCGGGTGGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGGGCGGGTTGCGGAAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGt  <  2:54514/200‑1 (MQ=255)

                                                                                                                                                                                              ccGGCTGTTCCATATGCGGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAggg                                                    <  1:475447/150‑1 (MQ=255)

GTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGGCTGTTCCATATGCAGCTCTTTCAGGTAGTTGTGCACACCTGCATACGGGCGACCCGTCGTTAGCACGACATTCACGCCACGGGCGCGAGCTGCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGT  >  NC_000913/3876576‑3876965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.