Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	564,107	IS2 (+) +5 bp	coding (370‑374/633 nt)	sfmZ ←	response regulator family protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	381260 =	NA (NA)	35 (1.060)	35/598	0.0	100%	noncoding (1/1331 nt)	IS2	repeat region
	?	NC_000913	= 564111	0 (0.000)					coding (370/633 nt)	sfmZ	response regulator family protein
*	?	NC_000913	= 382590	NA (NA)	54 (1.640)	48/600	0.0	100%	noncoding (1331/1331 nt)	IS2	repeat region
	?	NC_000913	564107 =	0 (0.000)					coding (374/633 nt)	sfmZ	response regulator family protein

CAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAGGTTCGCGTCCAGTAAAAAAGGCAATAAGTCCATAAATAATCCAGATG  >  NC_000913/382301‑382886                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                          cAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCa                                                                                                                                                                                                                                                                                               >  1:301500/1‑301 (MQ=32)      cGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATCGCGCGCTGGGGTATCGCTCGCCACGGGAATATCTGCGGCCGCGGGCTTGTCATGGGGTACGTGATGAAAGAGGTCTGGAAATATATGGGCAAGTCAAATT‑TCCtttacggcca                                                                                                                                                                                                                                                                                          >  2:230935/1‑292 (MQ=11)        cccGGATGTTGGGACTTTAAACGAAGAACACGGCGGGGAGGAGACCGGAGAGGAAAGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGtt                                                                                                                                                                                                                                                                                        <  2:28241/301‑1 (MQ=255)               gtggggACTTGAACCGAAGAACACGGCGGGGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGcc                                                                                                                                                                                                                                                                                  <  1:307274/297‑1 (MQ=38)               gTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCTGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAAACAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCGTGTACTGGGTTAAGTGATAACAGATGTCTGG‑AATAAAGGGGGAAATACTATTAACCAAGCAGGAAGTTGGCACCa                                                                                                                                                                                                                                                                                 >  2:184449/1‑301 (MQ=11)                 tGGGACTTGAACCGAAGAACGCGGCGGTGGGGAGACCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACAACATCAGTATCATGCCCAAGCCAGACGAGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCAATATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGACAGCGGGCTTGTAATGGATTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAAt                                                                                                                                                                                                                                                                               <  1:151583/301‑1 (MQ=255)                       ttGAACCGAAGAAAACGGCGGTGCGGAGTCCGGAGAGTAACGGAAGAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACAGCAGTATCATGCCCAAACCAGACGGCTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTAc                                                                                                                                                                                                                                                                         <  1:230945/301‑1 (MQ=255)                                  tacacGGCGGTGCGGAATCCGGAGAGTAACGGAGTAGCAGAGAACTTAGTGAAAACGATAAAGCGTGACTTCATCAGTATCATGCCCAAACCAGACGGTTTAACGGCAGCAAGGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTAACGATCGGCACGTGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGa                                                                                                                                                                                                                                                               <  1:220723/299‑1 (MQ=14)                                       ggcggTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGAGAAAGCGTTACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAAc                                                                                                                                                                                                                                                          <  1:318989/300‑1 (MQ=255)                                            tGCGGAGTCCGGAAGGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAGAGCGTGACTACATCGGTATCATGCCCAAACCAGACGGGTTAACGGGAGCAAAGAACCTTGCAGGGGCGTTCGAGCATTATAACGAATGGCAGCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTATGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCAc                                                                                                                                                                                                                                                     <  2:316747/300‑1 (MQ=255)                                                gAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACAACCGGACCATGAATAACGGCACCATGa                                                                                                                                                                                                                                                >  1:248646/1‑301 (MQ=255)                                                           gaaagggAATAGAAGAGAGTTGTGGGAAAATGATAAAGTGGGAATAACTAAGAAGAAGGGCCACACCGAACGGGCTAAAGGGAGCAAAGAACGTTGGAGAGGATGTCGAGCATTAAAACGAATGGCATCCGCACAGTGCGCTGGGTGAGCGCTCGCAACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACggg                                                                                                                                                                                                                                      <  2:235845/295‑1 (MQ=17)                                                            tAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACggg                                                                                                                                                                                                                                      <  2:301487/299‑1 (MQ=255)                                                                     aGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCg                                                                                                                                                                                                                           >  1:81544/1‑301 (MQ=255)                                                                                    gAAAACGATAAAGTGTTACTACATCATTCTCATGCCCAAACCAGCCGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAATGAATGGCCTTCGCATCGTGCGCTGGGTAATCGCGCGCAACGGGAATGTCTGCGGCACCGGGCTTGTAATGGGTTATGTGCTATCAGATGTCTGGCAATATAGGGGCAAATCCAATT‑ATCTATCTGGCAGTTTGCGCCTATCTTCACCGGGCCTTTAATAACGGCAGCATGACCACTACGGGCATTcgtcccgctactacattctcat                                                                                                                                                                                                            >  2:119258/1‑281 (MQ=14)                                                                                              aagccgaaactcatcaaattCATGCACTAGCCAGACGGGTAAACGGCCGAAAAGAGCCTTTGCGAGGCGGTCTGGCAGTATACCGTGTGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCAACGGGAATATCTGCGGCAGCGGGCTTGGAATGGGTTAAGTGATAACAGATGTCTGGAAAGATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTtcat                                                                                                                                                                                                  <  2:158092/282‑1 (MQ=21)                                                                                               aGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCATTCATTACCGGACCCTGAATAACGGAACCCTGACAACTACGGGGATTCGCGCTGATCACAACTCCACCTGCAGTTtcat                                                                                                                                                                                                  >  1:211959/1‑300 (MQ=255)                                                                                                   tGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCaata                                                                                                                                                                                             <  1:51610/301‑1 (MQ=255)                                                                                                          aTCGGTATCATGCCCAAACCAGACGGGTTAACGACAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCt                                                                                                                                                                                      <  1:310254/301‑1 (MQ=255)                                                                                                                      cccAAAACCGTCTGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGATCATTATAACGACTGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGTGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGTGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATc                                                                                                                                                                           <  1:302512/300‑1 (MQ=255)                                                                                                                         aaaCCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCATTTTCATCAATCATTACCTGGTCTGCAATCTGaa                                                                                                                                                                       >  1:260699/1‑301 (MQ=255)                                                                                                                             ctagcGGGCTAACTGCAGCAAATAACACTGCAGAGGCGTTCTAGCAGTCTAACGAAGGGCGTCCTCATAGTGCGCTGGGTGATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGTGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCAGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATAtt                                                                                                                                                                   <  2:90277/297‑1 (MQ=25)                                                                                                                              ataCGGGTTAACGGCAGCAAAGAACCTGTCAGAGGAGTTCGAGCACTATAACGAATGGCATCCGCATAGTGCGCTGGATTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCGTGTAATCGGTTAAGTGATACCAGATTTCTTGAAATATAGTGGAAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGTGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATAttt                                                                                                                                                                  <  1:119267/299‑1 (MQ=25)                                                                                                                               gACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACCAATACGGGTATTCGCCCCGATAACAACTTCACCTGCAGTTTCTTCAATAATTACCTGGTCTGCCATCTGAATAtttt                                                                                                                                                                 >  2:213012/1‑301 (MQ=255)                                                                                                                                       aaCGGCAGGAAAGAACCTTGCAGAGTCGTTCGAGGATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTa                                                                                                                                                         <  2:18362/301‑1 (MQ=255)                                                                                                                                         cGGCAGCAAAGAACCTTGCAGAGGCGTTCTAGCATTATAACGAATGGCATCCGCATAGTGCGCTGTGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGTAAATATAGGGGCAAATCTAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACCGCACCATCACAAATACGGGTATTCGTGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACTTGGTCTGCAATCTGAATATTTTTATCTTCaa                                                                                                                                                        >  1:10751/1‑300 (MQ=255)                                                                                                                                               caAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTaaa                                                                                                                                                 >  1:174487/1‑300 (MQ=255)                                                                                                                                                    aaCCTTGCAGAGGCGTTCGTGTATTATAACTAATGGCCTCCGCCTAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCTGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCa                                                                                                                                            <  2:174477/301‑1 (MQ=255)                                                                                                                                                                             ataACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAg                                                                                                                   >  1:149917/1‑301 (MQ=255)                                                                                                                                                                                            ccagtggTGCTCTGGTTTAT‑GCCTGCCAATGGAATATCCGGGGGAGCGGGGTTGTAATGGGGTTAATGATTAAAGATTTTCTGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGc                                                                                                   <  1:184459/295‑1 (MQ=255)                                                                                                                                                                                                tAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCGATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGt                                                                                                >  1:319966/1‑301 (MQ=255)                                                                                                                                                                                                       cTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACg                                                                                           >  1:129046/1‑299 (MQ=255)                                                                                                                                                                                                              ttgctcgtacaggggAATATCTGCGGCAGGTGACTTTAAATGGTGTAACTGATAACAGATTGATGGAAATAGTGGGGCTAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTCCCGGACCCTGAATAACGGCCCCATTACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCgtcaaccgcttattccc                                                                                  <  2:200855/289‑17 (MQ=255)                                                                                                                                                                                                               tcgctagcCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAg                                                                                 <  1:213022/301‑1 (MQ=255)                                                                                                                                                                                                                                               cTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGCTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAg                                                 >  1:33475/1‑301 (MQ=255)                                                                                                                                                                                                                                                   tAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTTCCGCTTCCACCAGTGCGGAATGGCGGTTGGGTTTGTGGCGCTGAGGttt                                             >  2:38590/1‑300 (MQ=255)                                                                                                                                                                                                                                                                  tAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCATCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTTCTGTTACAGAAGGTAGGGAATAAGCGGATGACGCTTCCACCAGTGCGGAATAGCGGGTGGGCTTTGCGTGTTTAGCTTCTTGTCCAGTaaaaaa                              >  2:136458/1‑301 (MQ=255)                                                                                                                                                                                                                                                                   aaCAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAGGTTCGCGTCCAGTAAAAAAg                             >  1:183303/1‑301 (MQ=255)                                                                                                                                                                                                                                                                   aaCAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGGGGGTTTGTCGCGCTGAGGTTCGCGTCCCGTGAAAAAg                             >  2:159168/1‑301 (MQ=255)                                                                                                                                                                                                                                                                            cTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAGGTTCGCGTCCAGTAAAAAAGGCAATAAGt                    >  1:257397/1‑301 (MQ=255)                                                                                                                                                                                                                                                                             tGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTTACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTTCGGAATATCGGGTGGGTTTGTCGCGCTGCGGTTCGCGTCCAGTAAAAAAGGCAATAGGt                    >  2:125440/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                 aaTATAGGAGCAAATCCAATT‑ACCATTCAGGCCGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAGGTTCGCGTCCAGTAAAAAAGGCAATAAGTCCata               <  2:149908/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                              aTCCCATT‑ACCTATCAGGCAGTTTGCGCCGATTACTACCGGACCCTGAATAACTGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAGGTTCGCGTCCAGTAAAAAAGGCAATAAGTCCATAAATAATCCAGATg  <  2:319952/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                              aTCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAGGTTCGCGTCCAGTAAAAAAGGCAATAAGTCCATAAATAATCCAGATg  <  1:159178/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                                          CAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAATT‑ACCTATCAGGCAGTTTGCGCCAATCACTACCGGACCCTGAATAACGGCACCATGACAAATACGGGTATTCGCGCCGATAACAACTTCACCTGCAGTTTCATCAATAATTACCTGGTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTTGGGAATAAGCGGTTGACGCTTCCACCAGTGCGGAATAGCGGGTGGGTTTGTCGCGCTGAGGTTCGCGTCCAGTAAAAAAGGCAATAAGTCCATAAATAATCCAGATG  >  NC_000913/382301‑382886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.