New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	639508 =	39 (1.180)	4 (0.120)	3/586	4.1	10.2%	coding (564/564 nt)	ahpC	alkyl hydroperoxide reductase, C22 subunit
	?	NC_000913	639635 =	32 (0.990)					intergenic (+127/‑118)	ahpC/ahpF	alkyl hydroperoxide reductase, C22 subunit/alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)‑binding
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

CATCGCTAAAATCAAATATGCGATGATCGGCGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGACACAAATATGAAAACTCAACTCAA  >  NC_000913/639208‑639784                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                     cATCGCTAAAATCAAATATGCGATGATCGGCGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTaa                                                                                                                                                                                                                                                                                      >  1:290493/1‑301 (MQ=255)     gCTAAAATCAAATATGCGATGATCGGCGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAAttt                                                                                                                                                                                                                                                                                  >  1:18287/1‑301 (MQ=255)                     cGATGATCGGCGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGAATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGGTAATTTTGCCCGGCTAAATGGAAAGAAGGTAAAGCAAACCTGGCTCAGCCCCTGGCCCTGGTTGGTAAAACCCAAATCTACTTCGTCTTTCCCg                                                                                                                                                                                                                                                                   >  2:253905/1‑300 (MQ=255)                               cGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAgcggcg                                                                                                                                                                                                                                                        <  1:221475/301‑1 (MQ=255)                                  cccGACTGGCGCCCTGGCCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTg                                                                                                                                                                                                                                                     <  2:18286/301‑1 (MQ=255)                                    ttccgatctcccGGACCCGTAACTTCGACAACCTGCGTGAAGATGAAGGTCTGGCTGACCGTCCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACAGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGc                                                                                                                                                                                                                                                   <  2:310720/292‑1 (MQ=255)                                          ccttcctttctcGTAACTTCGACAACAGGCGGAAAGATGAAGGTCTGGCTGACCGTGCGACCTGCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGcc                                                                                                                                                                                                                                             <  2:83769/290‑1 (MQ=255)                                           cgccaggACCCGAAACGTCGACAACAGGCGTGAAGAGGAAGGTATGGCTGACCTTGAGACCTGCGTTGTTGACCCGCAGGGTATCAGCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGGCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGcc                                                                                                                                                                                                                                             <  2:290481/294‑1 (MQ=255)                                             cccTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGcagatcggaa                                                                                                                                                                                                                                          >  1:310733/1‑292 (MQ=255)                                                     cGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGccagatcggaaga                                                                                                                                                                                                                                  >  1:83775/1‑290 (MQ=255)                                                                                                  gCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAgccgc                                                                                                                                                                                      >  1:261427/1‑300 (MQ=255)                                                                                                   cGACCTTCGTTGTTGCCCCGCATGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCt                                                                                                                                                                                    <  1:40266/301‑1 (MQ=255)                                                                                                      ccgtccgggttgACCCGCAGGGTATCATCCAGGCAATCGAAATTACCGCTAAAGGCATTGCCCGTGACGAGTCGGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCGTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGc                                                                                                                                                                                 <  2:114986/293‑1 (MQ=255)                                                                                                             tgttgACCCGCAGGGTATCTGCCAGGCAAGCGAAGTTACCGCTTAAGGCATGGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTGCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTGCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGAcg                                                                                                                                                                          <  2:272200/301‑1 (MQ=255)                                                                                                             tgttgACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGAcg                                                                                                                                                                          <  1:285960/301‑1 (MQ=255)                                                                                                              gttgACCCTCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTACATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGAcg                                                                                                                                                                          >  1:252779/1‑300 (MQ=255)                                                                                                                tgACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGa                                                                                                                                                                       >  1:190969/1‑301 (MQ=255)                                                                                                                   cccGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGACGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACACAGGTGAAGTTTGCCCGGCGAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCTCGCTATAGCCGCGTTGGAGTCGCCCGCTCACCCACGTCACTTACTTGTGTAAGATCCCGGGGATTCACAGGCGAGCCGCCTCTCCCTGAcgagtaca                                                                                                                                                                    >  2:160357/1‑295 (MQ=255)                                                                                                                                      gaaaTCGAAGTTAGCGCTGAAGGCATTGGCCGTGACGCGGCTGACCTGATGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGACTCTGGATATGGTTGGTAAAATCTAAATTTCCTTCGTCTGTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCAcc                                                                                                                                                    <  1:239216/296‑1 (MQ=255)                                                                                                                                                   ccGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCCCCTTGCTCTGCCGCGAAATACTCCGGAAATTCACCTAAATCTTCGGGtg                                                                                                                                      >  2:162655/1‑299 (MQ=255)                                                                                                                                                       tGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGACTCACAGGCTAGCCGCCTTGCCCTGACGCGAAATACTTCGGAAATTCACCTAATCCTTCGGGtgtctcgg                                                                                                                                >  2:250727/1‑295 (MQ=255)                                                                                                                                                         aaagCATTGGCCGTGCCGCATCTGACCTGCTGCGTAAACTAAAAGCAGCACATAACTTAGCTTCTCACCCAGTGGAAGTTTGCCCGGGTAAATGGAAAGAAGGTGAAGCAACCCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCa                                                                                                                              <  2:261416/298‑1 (MQ=255)                                                                                                                                                                               tGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCCCAGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCCCACCCTGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGATGCGAAATACTTCGGAAATCCACCTAATTCTCCGGGTGCTGCGGCACCCGATTCTCTTCCCCGCACCa                                                                                                        >  1:204343/1‑301 (MQ=255)                                                                                                                                                                                     gctgcGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCCCAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTTCTGCGGCACCCGATTTTCTTCCCCGCACCatgatg                                                                                                   >  2:36051/1‑300 (MQ=255)                                                                                                                                                                                                         cacaGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATGCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGc                                                                                <  2:276073/299‑1 (MQ=255)                                                                                                                                                                                                               aCGTAGCTTCTCACCCAGGTGGAGTTTGCCCGGCTAAATGGAAAGACGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGTTTGGTAACATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGATCACTTACTTGTGTAAGCTCCCGAAGATTCACAGGCTAGCCGCCTTGCTCTGACGCGTAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAgg                                                                        <  1:160367/301‑1 (MQ=255)                                                                                                                                                                                                                         tcACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCat                                                              <  1:250738/301‑1 (MQ=255)                                                                                                                                                                                                                         ccACCCCGGTTAAGTTTCCCCGGCTAAATGGAAAGAAGGTGAATCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCat                                                              <  2:190959/300‑1 (MQ=255)                                                                                                                                                                                                                              cAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCatgatga                                                         >  1:98118/1‑301 (MQ=255)                                                                                                                                                                                                                                       tttGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAg                                                <  1:162665/301‑1 (MQ=255)                                                                                                                                                                                                                                           cccGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAATCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTTCTGCCGCACCCGATTCTCTTCCCCTCACCATGATGCAAGCTGTATCCAGGTAGCCGTAGTGTCCGCTTGCATGATGATGTTTAAAGCGCa                                            >  1:104253/1‑301 (MQ=255)                                                                                                                                                                                                                                                            aagGTGAAGAAACTGTCACTCCATCTCATGACCTGGTTGGATAACTCTACATTTCCTTCGTCATGCCAGCAGTATCGGCGGTGGCGTCGCCCGCTCACCCCGTGCACTTACTTGAGTGAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCg                           <  2:252768/301‑1 (MQ=255)                                                                                                                                                                                                                                                            aaaatGAAACAACTCAGGCTCCGTCTCTAGACCTGGTTGGTAAAATCTAAATTACCTTCGGCTTTAACGGCAGAGCGGCATTGGCGTCGCATACTCACACCGGTCACGTACTTGTGTAAGCTCCCGGGTATTCACAAGCTAGCCGCCTTGCTCTGACACGAAATACTTCGAAAATTCACCTAATTCTTCAGGTGCTGCGACACCCGATTTTCTTCCCCGCACCAGGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATAATGATATTTAAAGCCCGGGAGATAAACATGCTCg                           <  2:204333/297‑1 (MQ=255)                                                                                                                                                                                                                                                             acccgtcgctcttccgctctgggctctGGACCTGGTTGGTAAAATCTAAAATTCCTGCTCCGTTCCCGCCATAGCGGCGTTGGCGTCGCCCTCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGa                          <  2:205226/278‑1 (MQ=255)                                                                                                                                                                                                                                                                      aaCTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGATCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCCTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGCGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGCAACCAatat                 >  2:53889/1‑301 (MQ=255)                                                                                                                                                                                                                                                                       cctctGTCTCCGTCTCTGGACCTTGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGACACAAATATg                <  1:253916/300‑1 (MQ=255)                                                                                                                                                                                                                                                                              cTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGACACAAATATGAAaact          >  1:266534/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                 cGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCCGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGaagatcggaagagaacacgt       >  1:205236/1‑281 (MQ=255)                                                                                                                                                                                                                                                                                     tctGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGACACAAATATGAAAActaaactcaa  >  2:88968/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                                     CATCGCTAAAATCAAATATGCGATGATCGGCGACCCGACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCTGACCGTGCGACCTTCGTTGTTGACCCGCAGGGTATCATCCAGGCAATCGAAGTTACCGCTGAAGGCATTGGCCGTGACGCGTCTGACCTGCTGCGTAAAATCAAAGCAGCACAGTACGTAGCTTCTCACCCAGGTGAAGTTTGCCCGGCTAAATGGAAAGAAGGTGAAGCAACTCTGGCTCCGTCTCTGGACCTGGTTGGTAAAATCTAAATTTCCTTCGTCTTTCACGCCATAGCGGCGTTGGCGTCGCCCGCTCACCCCGGTCACTTACTTGTGTAAGCTCCCGGGGATTCACAGGCTAGCCGCCTTGCTCTGACGCGAAATACTTCGGAAATTCACCTAATTCTTCGGGTGCTGCGGCACCCGATTTTCTTCCCCGCACCATGATGCAAGCTGCATCCAGGTAGCCGCAGAGGCCGCTTGCATGATGATGTTTAAAGCCCAGGAGATAAACATGCTCGACACAAATATGAAAACTCAACTCAA  >  NC_000913/639208‑639784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.