| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,188,929 | C→A | R1194S (CGT→AGT) | rpoC → | RNA polymerase, beta prime subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,188,929 | 0 | C | A | 91.2% | 91.3 / NA | 36 | R1194S (CGT→AGT) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base C (2/0); major base A (17/14); minor base G (0/3); total (19/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
ATGCCAGCGCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGA > NC_000913/4188632‑4189167 | aagcacggcggtaagttCCTCCCGGGAAAAGGGCTTGTTCAGCGGGAGGTTGCGGTCCAGATCGGCGCTGGTGACACCCTGGGGCGTATTCCGCAGGCATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTGGGGGACCTGTTCAAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTc < 2:98115/286‑1 (MQ=255) gcgcAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCa > 1:103379/1‑301 (MQ=255) cTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGtt > 1:162871/1‑300 (MQ=255) tCCTGCCGGGGAAAGGGATTGTTAAGCTGGAAGATGGCGTACAGGTCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATAACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACTAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGa < 2:52537/301‑1 (MQ=255) tagaGCGATTGTGCAGCTGGAAGATGGCGTACGGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTACGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACg < 1:130256/297‑1 (MQ=255) ttCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGCCCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGCAATTCGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCCCCCCGGTCGAC‑GGTAGCGATCCGTCCGACGAGCTGATTCCGAAATGGCGTCAGCTCAACGTGTTTGCAGGTGAACTTGTAGAACgtgg > 1:193282/1‑301 (MQ=255) aGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTACGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGCAAtt > 2:174448/1‑301 (MQ=255) ctctGGTGACCCCCTGGCGCGTATTCCGCAGGCATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGaa < 1:253094/298‑1 (MQ=255) ggTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAAAGTGGTGACGTAATTTCCGACGGTCCGGAGGagccg > 2:27353/1‑300 (MQ=255) tgagcacCCAGGGGGGTATTCCGCAGGAATCCTGCGGTACCAAGGACATCACCGGTGGTCTGCGGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGcgccgc < 2:103372/296‑1 (MQ=255) gCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCAGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGCAGCGCCGCACGGACTTCTGCGTCGGCgtggg > 2:54665/1‑300 (MQ=255) gggAATACGGAGGTACCAAGGAAATCACCGGTGGTCTGCCGGGCGTGGCGGACCTGTTCGAAGCACGTCGGCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCgtggtg < 2:162861/299‑1 (MQ=255) tCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAAAGGGGTGACGTAATTTACGACGGTCCGGCAGCGCAGCAAGACATTGTGAGTCTGCGTGGTGTTGATg > 2:59284/1‑301 (MQ=255) ggACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACTTGGTGACGTAATTTCCGACGGTCCGGAAGCGCGGCCCGACCTCCTGCGTCTGCGTGGTGTTCATGTTGTTACCCGttt > 2:113579/1‑299 (MQ=255) ccGGTGATCTGGCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTaa < 1:113587/301‑1 (MQ=255) tCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGt < 1:174458/300‑1 (MQ=255) ccGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTaacgatgtaacgagtaacag < 1:54668/300‑20 (MQ=255) cgTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTTCGACGGTCCGGAAGCGCAGCACGACATTTTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGta > 1:3137/1‑301 (MQ=255) cGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTATCGATCCGTACGAAGAGATGATTCCGAATTAGAGTCAGCTCAAACTCTTCGAAGGTGACCGTGTAGTACTTGGTGACTTAATTTCCGACGTCCCGGAAGCGTCGCACTGCACTCTCCGTCTGCGTGTTTGTCATGCTGTTATCAGTTACATCGTTAACCAAGTActaccattatcacg > 2:161123/1‑288 (MQ=255) ccTGTTCGAAGCACGTGGGTCGAAAGAGGCTGCAATCCTGGCGGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAATGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGGGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTg < 2:32327/301‑1 (MQ=255) tGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCtgctgc > 2:87859/1‑300 (MQ=255) cGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGACGCGCCGCACGACATTCTGCGTCGGCGTGGTGTTTATGCTGTTACTCTTTCAATCTTTAACGCAGTACAGGACTTATACCCTCTGCCGGGCGTTAAGGTTAACGa > 2:257582/1‑301 (MQ=255) aaaGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATa < 1:257593/301‑1 (MQ=255) agagCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAACCGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGACCGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGCAATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCCTTAACGAAGTCCAGGACGTATACTGTCTGCAGGCCGTTAAGATTACCGTTaaa > 2:60487/1‑301 (MQ=255) cAATCATGGTTGAAATCAGCGGTTTCGTTTCATTAGGTCAAGAAACCCAAGGTAAAAGTCGGCTTGTTATCTCACCGGTAGAC‑GGGAGCGATCCGGACGAAGAGATGATTGCGAAATGGGGTCAGATCAACGTGTTCGAATGTGAACGTGTAGAACGTGGTGACGTAATTTCCGATGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCg < 2:180152/300‑1 (MQ=255) aTCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACTTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGGGGTGTTCGTGCGGTTACTCGTTACCTCGTTAACGAAGTACAGGCCGTATACCCGCTCCACGCCGTTAAGATCAATGACAAAACCATCCaa > 2:269394/1‑300 (MQ=255) tCCTGGCTGAAAACAGCGTTATCGGTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATTATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGt < 1:270713/301‑1 (MQ=255) ccTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGAGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGAGTTAAGATTAATGATAAACACATCGAAGtt > 1:92700/1‑301 (MQ=255) gCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCGGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTAAAGATTAACGATAAACACATCGAAGTTAtcg > 1:146145/1‑301 (MQ=255) ataatgggTGTCGTTTACTTCGGTAAAGAAACCAAAGGGAAAGGTCGTCGGGTTATCACCCCGGTAGAC‑GGGAGCGGTGCATACAAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTc < 2:92694/295‑1 (MQ=255) aTCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTAtcgttcgtt > 1:83703/1‑300 (MQ=255) cGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGt < 1:27355/301‑1 (MQ=255) ggTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCa > 1:279529/1‑301 (MQ=255) ggcaaCGTTGTCTGGTATCCCCCCCGGTTAACGGGTGGCG‑TCCGTACCGAGGAACGATTCCGAAAGGGAGTAAGCTCAACGTGTTCAAAGGTGAACGTGTAGAACGCGGTGACTTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTa < 2:3137/297‑1 (MQ=255) gTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGAGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGCGGTGTTCATTCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCCGGGCGTTAAGTTTAACGATCAACACATCGAAGTTATCGTCCGTCAGATGCTCCTTAAAGCTACCATCGTTAACGCGGGTAg > 1:68903/1‑301 (MQ=255) tcgtcTGGGTCTCACCCCGGTAGAC‑GGTAGCGAGCCGTACGAAGAGATGATTCCGAAATGGGGTCAGCTCAACGTTTACGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGGCCGGAAGCTCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGa < 2:279517/300‑1 (MQ=255) | ATGCCAGCGCAGTACTTCCTGCCGGGTAAAGCGATTGTTCAGCTGGAAGATGGCGTACAGATCAGCTCTGGTGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGTAGAC‑GGTAGCGATCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTGTTCGAAGGTGAACGTGTAGAACGTGGTGACGTAATTTCCGACGGTCCGGAAGCGCCGCACGACATTCTGCGTCTGCGTGGTGTTCATGCTGTTACTCGTTACATCGTTAACGAAGTACAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAACACATCGAAGTTATCGTTCGTCAGATGCTGCGTAAAGCTACCATCGTTAACGCGGGTAGCTCCGA > NC_000913/4188632‑4189167 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |