| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,380 | 1 | . | C | 93.0% | 161.2 / 3.4 | 59 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (2/2); new base C (29/24); total (31/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| * | NC_000913 | 4,296,380 | 2 | . | G | 91.5% | 160.1 / 6.0 | 59 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base G (29/25); total (31/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTA‑‑C‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGTTGGCGT > NC_000913/4296148‑4296671 || gCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCTCTTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTg < 1:431763/300‑1 (MQ=9) cGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGTTTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCAACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTgg < 1:103126/300‑1 (MQ=255) cGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGCTTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTCGGt > 2:57447/1‑301 (MQ=9) ttgtagccgcgacgaaCATAAACTCCTGATGCGACGGTTGCCGCGTCTTACAAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTa < 2:99659/286‑1 (MQ=11) aacgcagCATCACACATCAAGGCCCGAAGCGACGCTGGCGTCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGTTTTGGCGTGATTTTGTAGGTCGAATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATTCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAt < 1:347658/295‑1 (MQ=11) ccgccgccACCGACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt < 1:57448/299‑1 (MQ=255) gACATCAACGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGCCGCCTAACGCGTTTTATCAGGCCTACGCCAGACCTCGCAATAGCCCGATTTAGCGTGATTTTGTCGGTCGGATAAGCCG‑CTTACGC‑‑C‑GC‑ATCCGACATCAATTCCTGATGCGATGCTTG‑CCGCGTCTCTACAGGCCTTTTTTAACCGTGTGTTAATTTCTAAAAct > 1:243504/1‑299 (MQ=11) tctacaccccgaagagttgctagtcgagtgttATCAGGCATAGACAAGAAGGAGCAATAGCCTGATTTGGCGTGATTTTGTATGTCGGATATGGAGTTTATGCCGCATACGACATCAACGCCTGATGCGGCGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTca < 2:373351/271‑1 (MQ=14) ccTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACCGCGCAATACCCTGATTTCGCTTGATTTTGGAGGTCGGAGAAGGCG‑TTTA‑‑CG‑C‑CCAATCTGCCATCAATGCCTGCTGCGAC‑CTTGACCGCTTTCTATCCGGCCTATGTTACACGTTGGTTTATTTTTCatatctttcttcatctt > 2:267357/1‑285 (MQ=1) gaggCGACGCTTGCCGGGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCATATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTa < 1:191091/297‑1 (MQ=255) cGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTCGGTCGGATACGGCGTTTATGCCGCATCCGAAATCAACGCCTGATGCGACTATTACGGCGGCTTATCAAGACTATGCCCGACAGCCCAATAGCCTGATTCAGGGTGACTTTGTTGGACGGATCACACG‑TTTA‑‑CGAC‑GC‑CTCCTACATGAATACCCGATGCCACCCTTT‑CCGCATCATAACATGCATATCCTCCACCTTGGATAATTGTTCaccctcatacccgcaggtttcacaca > 2:490657/1‑275 (MQ=2) cGCTTGCCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTC‑ACGCGTCTTCTCAGGCCTATATTAACCGTTGGTTAATTTTTAAAACTTTTAACCCCCAGTTTCAAAcc > 2:490661/1‑300 (MQ=11) tcagacgtgtgctcttccgatctcAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCACACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCa < 1:394301/278‑1 (MQ=17) cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGTCAGACAGCGCAATAGCCTGCTTTATCGTGATTTTGTAGGTCGGATAAGTCG‑CTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACCCTGT‑CCGCGTCTTATCAGGCCTATTTTAACCGTTGGTTAATTNTTCAAACCCTTCCCACCCGGtcacaacacccacacca > 2:70553/1‑285 (MQ=14) tcttagacggCCTTCGCCACACGGCGCAATAGCCTGATTTGGCCGTATTTTGTTGGTCGGAATAGGCGTTTATGCCGCAGCCCAACTCAACGCCTTAAGCGACGCTTTACGCGTCTTATCAGGCCTAGGCCAGACAGAGGAATAGCTCGATTTAGCGTGAGTTTGTAGGTCGGTTAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGc < 1:488256/293‑1 (MQ=17) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACACTTCCATACAGCTCAGGtt > 1:489064/1‑300 (MQ=255) cTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCaat < 1:98527/301‑2 (MQ=255) cAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCACACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACCCCCGGTATCAAACCCTTcaaagatcggaagaactgctgttagg > 2:394292/1‑276 (MQ=14) aaggcgaaTAGCCTGATTAGGCGTGGATTTGAAGGGCGGAAAAGGGTAGTAGTCCGAATCAGACAGGAACGCCGGATGCGACGCTTAGCGCTTCTGATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAgcg < 2:21113/295‑1 (MQ=18) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCtt > 1:181074/1‑301 (MQ=255) ctttccctccacgccggtcttccgatctggTCGGAGAAGGCTTTCATGCCGCTTCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGAAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCttt < 2:145560/273‑1 (MQ=18) acTGATTTAGCGTGATTTTGTAGGTCGTATAAGGCGTTTATGCCGCATCCGACATCAACGCCTTATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCt < 1:267361/298‑1 (MQ=255) tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACATCTCCGGTTCAACCAGTGCAGCGCCTTTTGCTTGtt > 2:24533/1‑301 (MQ=255) cgggATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCg < 1:267953/297‑1 (MQ=255) ggTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTAGCtcggaagagcacacgtctgaactc > 1:145562/1‑277 (MQ=18) gCGTTTATGCAGCAGCCGACATAAACGCCGGATGCGACGCTTAACGCGTCTTATCAAGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTaa < 2:181072/300‑1 (MQ=255) cGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGa < 1:24533/301‑1 (MQ=255) ttttATGCCGTATCGGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCATTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGaa < 1:2813/300‑1 (MQ=255) gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTCCAGCGCCTTTTGCTTTTTCTTTCCGATAAACCCTTCTTCACCGTTTAAGAActtcat > 2:368748/1‑301 (MQ=255) cgatctCAACGCCTGATGAGGCGCTTAAAGCGTCTTATCAGGCCTACGGCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑GTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCGTATCTTAGCCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTGGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGccc < 1:173303/296‑1 (MQ=25) cgaaagcAACGCATGATGCGACGGTGAACGCGGCTTGTGAGGCATACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTGTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GA‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGccc < 2:159455/295‑1 (MQ=25) tCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCATGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCTAACCCTTCCATACAGCTCAGGTTCAACCCATGCAGCGCCTTTTTCTTGTTCTTCTCGATAAAACCTTCTTCCCCTGTTAAGAACATTCTTCCCGCCCAGTa > 2:299365/1‑300 (MQ=21) cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTACTTTTTCAAACTCTTCACACACGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTGAAGAACATCATTCCCACCCCGTa > 1:322461/1‑299 (MQ=255) cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTCAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCTTTCCATACAGCTCAGGTTCAACCCGTCCAGCGCCTTTTGCTTGTTCTTCTCGATAAACCCTTTTTACCCGTTTAATAACATCATTCCTGCCCAgatgg > 2:173301/1‑297 (MQ=21) aaCGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCTGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACACTTCCATACAGCTCAGGTTCAACAAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCTCGCCCAGTACt > 1:329701/1‑300 (MQ=255) cTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCTTTTTGCTTGTTCTTCTTGATAAAACCTTCTTCACCGTCTAAGAACATCATTCCCGCCCATTACCCGGaaa > 1:97703/1‑300 (MQ=255) tCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCa > 1:48063/1‑301 (MQ=255) ttATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCaga > 1:61724/1‑301 (MQ=255) aGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTg > 1:48276/1‑300 (MQ=255) cgcccgcGCCACACACTGCAATAGCTTGATTTAGCTTGATTTTGTAGGGTGGATATGGCGATTCAG‑T‑‑C‑GC‑ATCCGACAACAACGCATGATGCGACGCTGG‑CCGCGTCTTATCAGGCCTATCATAACCGTTAGTGAATTTTTCAAACTCGCCACACCCGGTATCAAACCCCTCCATACAGCTCAGGTTCAACCAGAGCAGCGCCTTTCGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACAGCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCg < 1:490668/295‑1 (MQ=255) gCCTACGCCAGACCGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCg < 1:490672/300‑1 (MQ=255) acaccaagcAGCGCAGTCGTCTGATTTGGCGGGGTTTTTGCGGTGGGGTACGGCG‑TTTA‑‑CG‑CGGC‑ATCCGACAGCATTGCCTGGTGCGACGCTTG‑CCGCGTCTTATCAGGCCGATCTTACCCGTTGGGTAATTTTTCAACCTCTTCACGCCCGGTATCAAGCCCTTCCATACAGGTCAGGTTCAACCGGTGCAGCGGCTTTTGCTTGTTCTTCTCGGTAAGACCTTCTTCGCCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGa < 2:243501/293‑1 (MQ=255) gcaaGACAGCGAAATCGGCTGACTTAGGGTAATTTTGTAGGGCAGATAAGGCG‑CTTAAGC‑‑C‑GC‑GTCGAACATCAATGCCTGATGCGGCGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTAGTTAATTGTTCTAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCGGCGGCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACGTCATTCCCGCCCAATACTCGGAATAACCGGTTCGGGAAATTGCAGGGCTGCGTTTGaa < 2:97702/297‑1 (MQ=255) gCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGaaa > 1:411644/1‑301 (MQ=255) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCTGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTg > 1:51407/1‑301 (MQ=255) aTTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCCTACAGCTCATGTTCAACCAGTGCAGCGCATTTTTCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAATCACATCATTCCATCTCAGTAATGGGCATACCCGGTTCGGGAAATTGCAAAACTGGGTTTCAAATTCCAGGTTCCCttttagtat > 2:448904/1‑294 (MQ=25) ctgtaTTTTGTAGAGCGGATAATGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGc < 2:94136/296‑1 (MQ=255) tGATTTTGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCt < 1:70554/300‑1 (MQ=255) tggaGGGCGTATAAGTCG‑TTTACGC‑‑C‑TC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGcc < 2:51406/298‑1 (MQ=255) tGTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCCTCGTCGGCCTTAATGc > 1:419787/1‑300 (MQ=255) gTAGGTCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGTTTGCCTTGTCATCGTCGGCCTTACTGcc > 2:283509/1‑300 (MQ=255) atctCGGATAAGGCT‑TGTA‑‑CGAC‑TC‑ATCCAACATCAATGCCTGATTCGACGCTTA‑CCGCGTATTATCAGGCCTATCTTAACCTTTGGTTAATTGTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGcc < 1:132169/295‑1 (MQ=255) tCGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CTGCGTCTTATCAGGTCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGCATCAAACCCTCCCATACAGCTCAGGTTCAACCAGTGTAGTGCATTTTGCTTGTTCTCTTCGATAAAATCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACCTGGAATAAACGGTTCGGGAAATTGCCGAGCTGCGTCTGAAATACGAGGTCGCCCAGTAGTCGTCGGCTTTacttctctcgc > 2:91973/1‑290 (MQ=255) cGGATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTCAAGAACATCATTCCCGCCCCGTACTCGGAATAACCGGTTCGGGAAATTGAAGAGCTGCGCTTGAATCACCTGGTTGCCTATACATCCTCGGCCTTAAttacataacgg > 2:132167/1‑291 (MQ=38) gATAAGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGtt > 1:482774/1‑301 (MQ=255) tctggCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGTTgg < 1:4946/298‑1 (MQ=255) aGGCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCCCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTTTCATCGTGGGCCTTAATGCCCAAGCCGTTgggg > 2:1526/1‑299 (MQ=255) ggCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATGTTCGGCCTTAATGCCAACGCCGTTggaga > 2:4946/1‑298 (MQ=255) ggCG‑TTTACGC‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGTTGGCGt > 1:140791/1‑301 (MQ=255) || GCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCG‑TTTA‑‑C‑‑C‑GC‑ATCCGACATCAATGCCTGATGCGACGCTTG‑CCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATACCAGGTTGCCTTGTCATCGTCGGCCTTAATGCCCACGCCGTTGGCGT > NC_000913/4296148‑4296671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |