Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,595,025	+A	coding (456/1278 nt)	livM ←	branched‑chain amino acid ABC transporter permease

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	3,595,021	1	.→A	100.0%	298.4	77	coding (460/1278 nt)	livM	branched‑chain amino acid ABC transporter permease
Reads supporting (aligned to +/- strand):  new base (33/43):  ref base (1/0):  total (34/43)

GGCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGC‑A‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAG  >  NC_000913/3594826‑3595210                                                                                                                                                                                                     |                                                                                                                                                                                               ggCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGC‑a‑aaa                                                                                                                                                                                           >  1:77542/1‑200 (MQ=255)          tAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAgc                                                                                                                                                                                   >  1:706107/1‑200 (MQ=255)                               gcaATATGCGCACAATTTCGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAACAccgcc                                                                                                                                                              >  1:589563/1‑200 (MQ=255)                               gcaATATGCGCACAATTTCGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAAccgcc                                                                                                                                                              >  1:67953/1‑200 (MQ=255)                                                 cGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCACGCCGTAATAGTGATTGAGCAGCGC‑a‑a                                                                                                                                                                                             >  2:223263/1‑150 (MQ=255)                                                 cGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACcagcag                                                                                                                                            <  1:815684/200‑1 (MQ=255)                                                 cGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGC‑a‑a                                                                                                                                                                                             >  2:366687/1‑150 (MQ=255)                                                   ccGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGC‑a‑aaa                                                                                                                                                                                           <  2:151954/150‑1 (MQ=255)                                                              ggTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAAGCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAgcgc                                                                                                                                                                                 <  2:565403/150‑1 (MQ=255)                                                                    gATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATgg                                                                                                                                                                           <  2:423688/150‑1 (MQ=255)                                                                      tCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCg                                                                                                                                                                         >  2:428253/1‑150 (MQ=255)                                                                            gATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTacaaa                                                                                                                                                                   >  2:781099/1‑150 (MQ=255)                                                                            gATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTaaaaa                                                                                                                                                                   >  2:270753/1‑150 (MQ=255)                                                                             aTAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAAc                                                                                                                                                                  <  2:796833/150‑1 (MQ=255)                                                                                gTCACCTCGCAAACGCAGCACCGGAAAACCGAGCAGGAAACCCGCCGCCCCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGC‑ACAAAGTGTAAGCGCCGCAGGCGTAAAAAcctc                                                                                                                                                               >  2:449401/1‑148 (MQ=255)                                                                                    ccGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGAc                                                                                                         <  1:551737/200‑1 (MQ=255)                                                                                             cGCATCACCGGAAAACCGGGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAATCCAAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCccagcac                                                                                                                                                  <  2:735270/150‑1 (MQ=255)                                                                                              gcagcaCCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTAc                                                                                                                                                          <  4:288939/141‑1 (MQ=255)                                                                                               cagcaCCGGAAAACCGAGCAGGAAGCGCGCCGCCGCTGCCATTAATCCAGCAGTCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAAc                                                                                                                                                                  <  3:260996/132‑1 (MQ=255)                                                                                               cagcaCCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAAc                                                                                                                                                                  >  3:473051/1‑132 (MQ=255)                                                                                                agcaCCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGt                                                                                             <  1:477760/200‑1 (MQ=255)                                                                                                aaaaCCGGAAAACCGAGCATGAAGCCCTCCGCCGCTGCCATTAATCCAGCAATCGAAAGGCAGTACCAGAAGCCCAAGCCGTAATAGTGAGTGAGCAGCGCAA‑AAAGTGTAAGCGCCCATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGt                                                                                             <  1:345876/197‑1 (MQ=255)                                                                                                    ccGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGa                                                                                                                                           >  2:487961/1‑150 (MQ=255)                                                                                                     cGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTCAGCGCCTATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATc                                                                                        <  1:84374/200‑1 (MQ=255)                                                                                                     cGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATc                                                                                        <  1:488014/200‑1 (MQ=255)                                                                                                     cGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATc                                                                                        <  1:744263/200‑1 (MQ=255)                                                                                                      ggAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCccagcac                                                                                                                                                  <  4:356764/141‑1 (MQ=255)                                                                                                      ggAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGAcc                                                                                                                                         <  2:632146/150‑1 (MQ=255)                                                                                                               aGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCccagcac                                                                                                                                                  <  3:424236/132‑1 (MQ=255)                                                                                                                    gAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGaaa                                                                                                                                    <  4:389003/141‑1 (MQ=255)                                                                                                                       gCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGAc                                                                                                                                 <  4:473073/141‑1 (MQ=255)                                                                                                                        cccGCCGCCGCTGCCATTAATCCAGAAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGAcc                                                                                                                                <  4:389981/141‑1 (MQ=255)                                                                                                                          cgccgccgcTGCCATTAAGCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGGGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATcc                                                                   <  1:17021/200‑1 (MQ=255)                                                                                                                                 gcTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAGAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTcc                                                            <  1:184086/200‑1 (MQ=255)                                                                                                                                    gCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACccac                                                                                                                             >  3:459910/1‑132 (MQ=255)                                                                                                                                    gCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACTACGtt                                                                                                                    >  4:168495/1‑141 (MQ=255)                                                                                                                                           aTCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAAc                                                  <  1:35647/200‑1 (MQ=255)                                                                                                                                               aGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGAc                                                                                                         <  4:279935/141‑1 (MQ=255)                                                                                                                                                  aagaggcaggcaGGTCCAGAAGCACAAGCCGTAATAGGGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAGCAACCACGTTCAACCCGAGACCGAGGATAATGt                                                                                             <  2:696837/146‑1 (MQ=255)                                                                                                                                                       gcaggcagGTCCAGAGGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGACGATGGCGTAAAAACCGCCGTACCCCAGCACCAGAAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATc                                                                                        <  2:816701/150‑1 (MQ=255)                                                                                                                                                         aggcaggTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCATAAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCac                                                                                      >  2:821454/1‑149 (MQ=255)                                                                                                                                                          ggcaggTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATg                                                                                     >  2:729894/1‑150 (MQ=255)                                                                                                                                                          ggcaggGCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGT‑AAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGt                                                                                             <  4:209770/141‑1 (MQ=255)                                                                                                                                                           gcaggTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGt                                                                                             <  4:53037/141‑1 (MQ=255)                                                                                                                                                              ggTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCAcc                               >  1:550391/1‑200 (MQ=255)                                                                                                                                                              ggTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACAGTCCCGCGTGAAACCATAAACGGCCACGCCAcc                               >  1:9913/1‑200 (MQ=255)                                                                                                                                                               gTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAgct                                                                                         >  4:474599/1‑139 (MQ=255)                                                                                                                                                               gTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGAt                                                                                         >  4:456757/1‑141 (MQ=255)                                                                                                                                                               gTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAg                                                                                >  2:228604/1‑150 (MQ=255)                                                                                                                                                                tCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCACCAACCACGTTCAGCCCGAGACCGAGGATa                                                                                                 >  3:196572/1‑132 (MQ=255)                                                                                                                                                                tCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATc                                                                                        <  4:472882/141‑1 (MQ=255)                                                                                                                                                                 ccAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAggg                                                                              <  2:246911/150‑1 (MQ=255)                                                                                                                                                                 ccAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCa                            >  1:188429/1‑200 (MQ=255)                                                                                                                                                                    gAAGCCCAAGCCGTGATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGt                                                                                             <  3:326768/132‑1 (MQ=255)                                                                                                                                                                       gCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAgc                                                                                          >  3:620777/1‑131 (MQ=255)                                                                                                                                                                       gCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCaa                                                                        <  2:256392/150‑1 (MQ=255)                                                                                                                                                                       gCCCAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCaa                                                                        <  2:772177/150‑1 (MQ=255)                                                                                                                                                                         cgaaGCCGTAGTAGTGGTGGAGCAGCGCAA‑AAAGTGTAAGCGCCGAGGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCGGAAAAACCAACAACCACGTTCAGCACGAGACCGAGGATAATGTAGATc                                                                                        <  3:449801/130‑1 (MQ=255)                                                                                                                                                                         ccAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATc                                                                                        <  3:451171/132‑1 (MQ=255)                                                                                                                                                                         ccAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATc                                                                                        <  3:627460/132‑1 (MQ=255)                                                                                                                                                                          cAAGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCCCCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAAc                   <  1:225062/200‑1 (MQ=255)                                                                                                                                                                            aGCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGGAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAg                 <  1:90946/200‑1 (MQ=255)                                                                                                                                                                             gCCGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGCGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCa                                                                  >  2:649111/1‑150 (MQ=255)                                                                                                                                                                              ccGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTATCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATAACCAc                                                                 >  2:307956/1‑150 (MQ=255)                                                                                                                                                                              ccGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGc                                                                          >  4:569674/1‑141 (MQ=255)                                                                                                                                                                              ccGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGc                                                                          >  4:152405/1‑141 (MQ=255)                                                                                                                                                                              ccGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATcccc                                                                 >  2:96188/1‑148 (MQ=255)                                                                                                                                                                              ccGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAgcg               >  1:162643/1‑200 (MQ=255)                                                                                                                                                                              ccGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAgcg               >  1:253508/1‑200 (MQ=255)                                                                                                                                                                              ccGTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAgcg               >  1:94059/1‑200 (MQ=255)                                                                                                                                                                              cagTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGTCGTACCCCATCACCAGCAGAGTAGAAAGACTAACAACCACGTTCAGCTCGAGACCGCGGATAAGGTACATCATGGt                                                                                   >  3:374446/3‑132 (MQ=255)                                                                                                                                                                                gTAATAGTGATTGAGCAGCGCAA‑AAATTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCaa                                                                        <  4:557249/141‑1 (MQ=255)                                                                                                                                                                                gTAATAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCaa                                                                        <  4:579336/141‑1 (MQ=255)                                                                                                                                                                                   aTAGTGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTcc                                                            <  2:322499/150‑1 (MQ=255)                                                                                                                                                                                    tAGGGAATGAGCAGCGCAA‑AAAGTGGAAGCGCCGATGGCGTAAAAGCCGCCGTACCCCAGGAACAGCAGACCGGAAAGACCAACGACCACGTTAAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGt                                                                             <  3:226809/132‑1 (MQ=255)                                                                                                                                                                                       tGATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGa      >  1:786834/1‑200 (MQ=255)                                                                                                                                                                                        gATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCa                                                                         >  3:479944/1‑132 (MQ=255)                                                                                                                                                                                        gATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGt                                                       >  2:663956/1‑150 (MQ=255)                                                                                                                                                                                        gATTGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGAGAATGTAGAACATGGTCAGGGTGGCa                                                                         >  3:251660/1‑132 (MQ=255)                                                                                                                                                                                           tGAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAg  <  1:460888/200‑1 (MQ=255)                                                                                                                                                                                            gAGCAGCGCAA‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTcc                                                            <  4:618250/141‑1 (MQ=255)                                                                                                                                                                                                     |                                                                                                                                                                                               GGCCGCCGGTAATTTCGGTGTTATTGAGCAGCAATATGCGCACAATTTCGCCGAAACCGAGGGTAACGATCGCCAGATAGTCACCGCGCAAACGCAGCACCGGAAAACCGAGCAGGAAGCCCGCCGCCGCTGCCATTAATCCAGCAATCGGCAGGCAGGTCCAGAAGCCCAAGCCGTAATAGTGATTGAGCAGCGC‑A‑AAAGTGTAAGCGCCGATGGCGTAAAAACCGCCGTACCCCAGCACCAGCAGACCAGAAAGACCAACAACCACGTTCAGCCCGAGACCGAGGATAATGTAGATCATGGTCAGGGTGGCAATATCCACCGTCCCGCGTGAAACCATAAACGGCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAG  >  NC_000913/3594826‑3595210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.