New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =971 (0.850)166 (0.170) 67/220 13.6 16.9% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 783 (0.790)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1126 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380
                                                                                                                                  |                                                                                                                                
  atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGATCTTGTAAAAAATAGA‑tttttt                                                                                                                                >  1:1089559/1‑128 (MQ=255)
     tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttt                                                                                                                             >  1:1770253/1‑128 (MQ=255)
       gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑ttttttttttt                                                                                                                           >  2:2286797/1‑128 (MQ=255)
        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATATC‑tttttttttttt                                                                                                                          >  1:1593393/1‑128 (MQ=255)
        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttt                                                                                                                          >  2:1236736/1‑128 (MQ=255)
           cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑ttttttttttttttt                                                                                                                       >  2:85205/1‑128 (MQ=255)
           cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑ttttttttttttttt                                                                                                                       >  2:524491/1‑128 (MQ=255)
             ttAATTTATCGCACATGTATGAATTATTAATAAACTAAAAATATTATCTTTTTATCTATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑tttttttttttttttta                                                                                                                     <  1:1845525/128‑2 (MQ=255)
             ttAATTTATCGAAATTTTATTAATTTTTTAGAAACAAAAAATATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttt                                                                                                                     <  1:1905972/128‑1 (MQ=255)
                   tataGCACTTGTATGAATTATTAATAAACAAAAACTATTATATTTTTATATTTTTTTTTTAT‑ATTCAAA‑TTTTTAAAAAATTAATTTGAAATTTTAAAAAAAACC‑ttttttttttttttttatataat                                                                                                               <  1:2383901/128‑8 (MQ=255)
                     tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTATTTTTTTTTtataaatta                                                                                                             >  1:1204324/1‑123 (MQ=255)
                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGa                                                                                                           >  2:1522478/1‑128 (MQ=255)
                         aCTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttatttttttattaatttaatt                                                                                                         >  2:1171073/1‑116 (MQ=255)
                         aCTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑AAGCAAA‑TTTTTAAAAAATTAATTTGAACTTCTAAAAAATAGC‑TTTTTTTTTTATTTTTTTaatattaaaat                                                                                                         >  2:2257971/1‑121 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTtattatttaaatataa                                                                                                       >  1:587340/1‑118 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTaataattaaattt                                                                                                       >  2:268035/1‑121 (MQ=255)
                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTATTTTaatatgtatatat                                                                                                       >  2:934402/1‑119 (MQ=255)
                             gTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATaaa                                                                                                   >  1:2028901/1‑128 (MQ=255)
                               attaaaatttaataaAATAAAAATTTTAACTTTTTTTATATTTTTTTTAA‑ATTAAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAA‑ATC‑‑CTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  1:511834/119‑1 (MQ=255)
                               attaaTTTGTAAGAAAATAAAAATATTATATTTTTAGATATTTTTTGTAT‑ATTCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAAAA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  2:881259/125‑1 (MQ=255)
                                 ttattttttataaaataaaaataTTTTTTTTTTTTTTATTTTTTTTATAATGAAAT‑TTTTTAAAAAATAAATTT‑AAATTTTATAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAttt                                                                                                <  1:1642735/117‑1 (MQ=255)
                                 ttaatAGTAAACAACAAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTTTACTTGTAAAAAAAACC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  2:1972340/124‑1 (MQ=255)
                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATTTAAAAATAAATTTTa                                                                                              >  2:222357/1‑128 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATTGAAATATAAATTTTAgg                                                                                            >  2:661989/1‑128 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGTAAATATAAATTTTAgt                                                                                            >  2:2008065/1‑127 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATTAATAttttttg                                                                                            >  2:193430/1‑125 (MQ=255)
                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAAAATTTAAATTTAAAttttttt                                                                                            >  2:716054/1‑125 (MQ=255)
                                          aGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTAAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTATTTTTTTTTAATAATTGAAAAATAAAATATAAGTAttta                                                                                      >  1:773906/1‑127 (MQ=255)
                                                 taaaataTTTTTTTTTTTTATTTTTTTTTTAT‑TTTCAAA‑TTTTTTAAAAATTTATTTTTAATTTTTAAAAAAA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCt                                                                               <  2:1688687/127‑1 (MQ=255)
                                                 aaaactaTTATCTTTTTAGATATTTTTTGTAT‑ATTCAAA‑TTTTTAAAAAATTAATTTGAACTTTTAAAAAATAG‑‑‑‑ATTTTTTTTTTTTTTTTATATTTTAAATATAAATTTTAGGTATttttttttata                                                                              >  1:1351994/1‑123 (MQ=255)
                                                 aaaactaTTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGTAAATATAAATTTTAGGTATtttttttta                                                                                >  1:818805/1‑125 (MQ=255)
                                                  aaactaTTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATttttttttat                                                                               >  1:963980/1‑124 (MQ=255)
                                                  aaaaattaatatttttAGATATTTTTTGTTA‑ATTCAAA‑ATTTTAAAAAATTAATTTTAAATTTTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                             <  2:1407532/117‑1 (MQ=255)
                                                    actaTTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATATTGATAATATAATTTTTATGTTTTTTGTTGTTTa                                                                              >  2:1581915/1‑128 (MQ=255)
                                                     atattatATTTTTAGATTTTTTTTGTTT‑ATTCAAA‑TTTTTAAAAAAATAATTTTAAATTTTAAAAAATATC‑CTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                             <  1:1277798/127‑1 (MQ=255)
                                                      tattatCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTAAAATATAAATATTATTAATTTTTTTTTATAATTAt                                                                         >  1:33850/1‑128 (MQ=255)
                                                       tttatttttttttttatttttttttT‑TTTTAAA‑TTTTTTAAAAATTTATTTTTAATTTTTAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTa                                                                          <  2:12999/127‑1 (MQ=255)
                                                       attatCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATTATTTAAATATAAATTTTATTTATTTTTTTATATAAATa                                                                          >  2:465468/1‑128 (MQ=255)
                                                        ttttttttttATTTATTTTTTTTAT‑TTTTATA‑TTTTTATAAAATTAATTTTAAATTTTTAAAATTA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATc                                                                        <  1:2443131/123‑1 (MQ=255)
                                                        ttatCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTAATATTTTTTATAAGTa                                                                          >  1:874414/1‑128 (MQ=255)
                                                        ttatCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTTTTTATAATTAt                                                                         >  1:1470050/1‑128 (MQ=255)
                                                        ttatCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAATAAAAAATTTTTGTTTTTTTTTTGTAAAAGttt                                                                         >  2:2387971/1‑126 (MQ=255)
                                                        atttttttttATATTTTTTTTTTTT‑TTTTAAA‑TTTTTAAAAAATTTATTTTAATTTTTTAAAAAT‑TT‑ATTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                         <  2:1812668/123‑1 (MQ=255)
                                                         tatCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGTATTTTTTTTTATAATtatata                                                                      >  1:1147473/1‑128 (MQ=255)
                                                          atCTTTTTTTATATTTTTTTTAT‑ATTAAAA‑TTTTTAAAAAAATATTTTTTAATTTTTAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCt                                                                       <  2:1869126/128‑1 (MQ=255)
                                                          atCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTAATTTATttttttttatatttttat                                                                       >  1:625688/1‑116 (MQ=255)
                                                            cTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTTTTTATAATTATATaa                                                                     >  1:2338617/1‑128 (MQ=255)
                                                             tttttAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATTTATTTTTTTTTAAAATTATATaaa                                                                    >  1:172531/1‑128 (MQ=255)
                                                              ttttAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAATTTTTAAGTTTTTTGTTTAATATGTATCTaaat                                                                   >  2:1045834/1‑127 (MQ=255)
                                                              ttttAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTTATTTTTTTTTATAATTATATaaaa                                                                   >  2:1744404/1‑128 (MQ=255)
                                                               tttAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTTGTTATTTTTTTGTATATTTATATaaaaaat                                                                >  1:261791/1‑127 (MQ=255)
                                                                 tAGATATTTTTTGTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTATAATTGAAAAATAAATTTTAGTTATTTTTTTTTATAATTATAaaaaaa                                                                  >  1:20594/1‑128 (MQ=255)
                                                                  tttttttttttttAT‑TTTCAAA‑TTTTTAAAAAATTTATTTTTAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTTTTTTGTTGTCTAAGTATCTaaaaatag                                                               <  2:1896813/123‑4 (MQ=255)
                                                                   tatatTTTTTTTAT‑TTTTAAA‑TTTTTAAAAAATTTATTTTTAATTGTTATAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGATATATAAATTTTAGTTATTTTGTTGTCTAAGTATCTAAAAAA‑ATa                                                             <  1:131683/127‑1 (MQ=255)
                                                                    ttttttttttttt‑ATTTATA‑TTTTTAAAAAATTATATTTTACTTTTTAAAAAT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAg                                                            <  1:910610/125‑1 (MQ=255)
                                                                    atatTTTTTGTAT‑AATCAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAg                                                            <  1:477810/128‑1 (MQ=255)
                                                                     ttttttttttAT‑ATTCAAATTTTTTAAAAAATTATTTTTAA‑TTTTAAAAAAT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGa                                                           <  1:1520633/126‑1 (MQ=255)
                                                                     tatTTTTTGTAT‑ATTCAAA‑TTTTAAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTATTTTATTTA‑AATAAAAATTAAAATTTAATGAATTTTATAGTCAAAGTAACTaaaaaa‑aaata                                                           >  2:2113525/1‑124 (MQ=255)
                                                                        ttttttTAT‑ATTTAAA‑TTTTTAAAAAATTAATTTTTAATTTTAAAAAATA‑T‑ATTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAg                                                        <  2:343481/128‑1 (MQ=255)
                                                                             gTAT‑ATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATTTATTTTTTTTTATAATTATATAAAAAA‑AAATAAATTaaaa                                                   >  1:1426049/1‑128 (MQ=255)
                                                                              tat‑aTGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTATGAAATTTTTTATAAAATTATATAAAAAA‑ATATAAATTaaaaaa                                                 >  2:5026/1‑128 (MQ=255)
                                                                                t‑atGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATATTGTAAATTTAAATTTTAGTTATTTTGTTTTGTAATTATATTAAAAA‑ATTAAATTGaaaaaaa                                                >  2:2428825/1‑127 (MQ=255)
                                                                                  attgaaa‑TTTTTAAAAAATAAAATTTAAATTTTCAAAAATATC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAat                                                <  1:2222560/124‑1 (MQ=255)
                                                                                   ttcAAA‑TTTTTTAAAAATTAATTTGAAATTTTTAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATAtt                                             <  2:615331/126‑1 (MQ=255)
                                                                                    gCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGTATAATTATATAAAAAA‑ATTTAAAGGAAAAAATAtt                                             >  1:168034/1‑128 (MQ=255)
                                                                                     cAAT‑TTTTAAAAAAATTATTTTTAACTTTTAAAAAATTG‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTg                                            <  2:784039/128‑1 (MQ=255)
                                                                                     cAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGTAATTATAAATTTTAGGTTTTTTGTTTTATATTTTTATAAAAAA‑ATTAAAAGTAAAAAAttttt                                            >  1:1989559/1‑127 (MQ=255)
                                                                                      ata‑TTTTTAAA‑AAATAATTTTTAATTGTTAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGtt                                          <  2:1361108/126‑1 (MQ=255)
                                                                                      aaa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTT‑‑TAATTGAAATATAAATTTTAGTTTTTTTTTTTTATAATTAACTAAAAAA‑ATATAAATGAAAAAATATtttt                                          >  1:2113659/1‑128 (MQ=255)
                                                                                       aa‑TTTTTATAAAATTAATTTTTAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTaa                                        <  1:736622/128‑1 (MQ=255)
                                                                                       aa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATATTGTAAATTTAAATTTTAGGTATTTTTTTGTATAATTATTTAAAAAA‑ATATAATGGaaaaataatttt                                           >  1:446100/1‑121 (MQ=255)
                                                                                        a‑TTTTTAAAAAATTAATTTTTAATTTTTAAATATA‑‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTaa                                        <  1:662634/128‑1 (MQ=255)
                                                                                           tttttaaaaattaattTTAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTaaa                                       <  1:306528/120‑1 (MQ=255)
                                                                                             ttaaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAAAAAAAATTTTATTTATTTTTTTTTAAAATTATAAAAAAAA‑ATATAAATTAAAAAATTTTTTTAAAATTa                                   >  2:3735/3‑128 (MQ=255)
                                                                                              taaaaaaTTAATTTTAAATTTTAAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGt                                    <  2:810229/127‑1 (MQ=255)
                                                                                                aaaaattaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTATA‑ATTGAAAATAT‑ATTTTTTTTTTTTTTTTTGAGAAATTTTAAAAAAAA‑ATATAAACTAAAAAAATTTGTTAAAAATatt                                 >  2:1615158/4‑126 (MQ=255)
                                                                                                  aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAATAAAAATTTTTGTTATTTTTTTGTATAATAATAAAAAAAA‑ATAAAAAAGAAAAAATAATTTTAAAATTaaaa                                >  2:434363/2‑126 (MQ=255)
                                                                                                  aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAATTAAAATTTTTTTTTATTTTTTTTTATAATTTTATAAAAAA‑ATATAAATAAAAAAATATTTTTaaatttataa                                >  2:2465790/2‑121 (MQ=255)
                                                                                                   aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTTTATATTTTTATTAAAAA‑ATAGAAAGTAAAAAATATTGTTAAaataaataa                               >  1:117088/1‑127 (MQ=255)
                                                                                                   aattaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATTGTAATATAAATTTTTGGTATTTTTTTTGCAAAATATAAAAAAAA‑AAACAAATGAAAAAATATATATAAAAATAAAAca                              >  2:2320031/1‑127 (MQ=255)
                                                                                                    attaattTGAACTTGTATAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATATTGTTAATAAAATTTTTAGGTTTTTTGTTTTATAATTATAAAAAAAA‑ATAGAAAATAAAAAATTTTTTTAAAATTAATaaaaa                            >  1:2205619/1‑124 (MQ=255)
                                                                                                    attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAAATTTAGGTATTTTGTTTTAAATTTATAAAAAAAA‑ATAAAAATGAAAAAATATTTTTAAAAGTAAAACTa                             >  1:1243527/1‑128 (MQ=255)
                                                                                                     ttaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATTAAAAAAAAAATTTTAGGATTTTTTTTTTATAAATATATAAAAAA‑AATAAATGTAAAAAAAATTTTTataataaaaatta                             >  2:2158745/1‑119 (MQ=255)
                                                                                                        attTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGGAAATATAAATTTTAGTTTTTTTTTTTTATAAGTAAATAAAAAATATA‑AAAATAAAAAATTTTTTTAAAATTAATAaaaaaa                          >  2:2058099/1‑128 (MQ=255)
                                                                                                              aCTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTTAATTGAAATAAAAATTTTAGGTTTTTTTTTTTTTAATTATATAAAAAA‑ATATAAATTAAAAATTATTTTTTAAATTAATACTAAAattata                     >  1:704455/1‑127 (MQ=255)
                                                                                                               attttAAAAAATATC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                    <  2:1118329/124‑1 (MQ=255)
                                                                                                                ttGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGGAAATATAAATTTTATGTATTTTGTTGTAAAATTAAAAAAAAAA‑ATAAAAATTAAAAAATATTATTAAAATTTATAATAAAATTATTTaa                  >  1:1938277/1‑128 (MQ=255)
                                                                                                                   ttttattaattttttttttttttttttttttATAATTGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAAt                 <  1:396501/116‑1 (MQ=255)
                                                                                                                   tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAATAAAAATTTTTGTTTTTTTTTTGTATAATTAAATAAAAAA‑ATATAAAGTAAAAAATTTTTTTTAAATTAATAAAAAAATTTTTTTATGt               >  1:2172646/1‑128 (MQ=255)
                                                                                                                       aaaTAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGTAATTTAATTTTTAGGTATTTTTTTGTTTAAGTATATAAAAAA‑ATAGAAAGGAAAATTATTTGTTAAAATTATTAAGTAAATtttttatttttatt           >  1:1562697/1‑126 (MQ=255)
                                                                                                                           atattttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:1269048/124‑1 (MQ=255)
                                                                                                                             tagctttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATATAAAAAA‑ATAGAAAGGAAAAAATATTTTTAAAAGTAATAATAAAATTATTTAATGTTAATTaaa       >  1:846565/5‑128 (MQ=255)
                                                                                                                              gcttttttttttttttttttATAATAAAAATAAAAATTTTATTATTTTTTTTTTATAATTTAATAAAAAA‑AAATAAAGTAAAAAAAATTTTTAAAATAAAAAAAAAAATTTTTTAATTTTAATTaaaa      >  2:570539/3‑128 (MQ=255)
                                                                                                                                ttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTTTCTAAGTTTCTAAAAAA‑ATTGAAAGTAAAAAATATTTTTAAAATTTATAATAAAATTATTAAATGTTTATTaaaaat    >  1:1008164/1‑126 (MQ=255)
                                                                                                                                 tttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACtt   <  1:548880/128‑1 (MQ=255)
                                                                                                                                 tttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACtt   <  1:2414071/128‑1 (MQ=255)
                                                                                                                                 tttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTATAAGTATATAAAAAA‑ATAGAAAGTAAAAAATATTTTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAAAtt   >  1:2287362/1‑128 (MQ=255)
                                                                                                                                  ttttttttttttttttATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  2:1463797/128‑1 (MQ=255)
                                                                                                                                  ttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTTTTTTATAATTATATAAAAAA‑AAAAAATGGAAAAAAAATTGTTAAAATTAATAATAAAATTATTTAAAGTTAATAAAAAATta  >  1:1891251/1‑128 (MQ=255)
                                                                                                                                  ttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  1:2257971/128‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTAT‑ATGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAA‑ATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.