New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 165247971 (0.850)134 (0.120) 39/252 21.1 12.0% intergenic (+211/‑331) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 165251 = 987 (0.870)intergenic (+215/‑327) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1107 total aligned reads displayed.

TAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTA‑AAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACT  >  CP016816/165124‑165378
                                                                                                                                 |                                                                                                                               
  atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATTCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCtttt                                                                                                                               >  1:1785480/1‑128 (MQ=255)
    atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGATCTTGTAAAAAATAGAtttttt                                                                                                                             >  1:1089559/1‑128 (MQ=255)
    atTTAGTTTAATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTAATATCTTTTTAGATATTATTTGTATACTCAA‑ATTTTT‑AATAAATTAATTTGAACTTGTAAAAAATAGCttttta                                                                                                                             >  2:1623078/1‑127 (MQ=255)
      ttAGTTTCATTAATTTATCGCACTTGTATGATTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTTAACTTGTAAAAAATAGCtttttttt                                                                                                                           >  2:656895/1‑128 (MQ=255)
       tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttt                                                                                                                          >  1:2290012/1‑128 (MQ=255)
         gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGAAA‑ATTATT‑AAAAAATTAATTTGAAATTGTAAAAAATATCttttttttttt                                                                                                                        >  1:1171886/1‑128 (MQ=255)
          tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttt                                                                                                                       >  2:1236736/1‑128 (MQ=255)
          tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttt                                                                                                                       >  1:1431684/1‑128 (MQ=255)
           ttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttttt                                                                                                                      >  1:1284987/1‑128 (MQ=255)
              aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttttttt                                                                                                                   >  2:2264744/1‑128 (MQ=255)
              aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATACAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATATCtatttttttttttatt                                                                                                                   >  2:1583366/1‑128 (MQ=255)
                      aTCGCAATTGTATGAATTATTAATAAACTAAAAATATTATTTTTTTATTTATTTTTTTTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTTTAAAAAATATCtttttttttttttttatataatgg                                                                                                           <  2:842087/128‑10 (MQ=255)
                       tCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTATTTTTTTTTtataaatta                                                                                                          >  1:1204324/1‑123 (MQ=255)
                           aCTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttatttttttattaatttaatt                                                                                                      >  2:1171073/1‑116 (MQ=255)
                             ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTtattatttaaatataa                                                                                                    >  1:587340/1‑118 (MQ=255)
                             ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATTGaaaat                                                                                                    >  1:189288/1‑126 (MQ=255)
                             ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAatat                                                                                                   >  1:341174/1‑128 (MQ=255)
                              tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTTaaattatatat                                                                                                   >  2:465382/1‑119 (MQ=255)
                                 aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATATCTTTTTTTTTTTTTTTTTTAAAAAT‑TAAATATAAAt                                                                                               >  1:964812/1‑128 (MQ=255)
                                   ttaatAGTAAACAACAAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTTTACTTGTAAAAAAAACCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                              <  2:1972340/124‑1 (MQ=255)
                                   gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAAATAAAttt                                                                                             >  1:1473320/1‑128 (MQ=255)
                                     aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTTAAAAATAAATTTTa                                                                                           >  2:222357/1‑128 (MQ=255)
                                     aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGT‑AAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATTTAATTATAATTTTTAg                                                                                          >  1:842061/1‑128 (MQ=255)
                                       tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATTTAAAAATAAAtttttat                                                                                         >  2:368717/1‑125 (MQ=255)
                                       tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAgtt                                                                                        >  1:2451066/1‑126 (MQ=255)
                                       atgtaattaaataaaaaaaTTATATTTTTTTTTATTTTTTTTTTATTGAA‑ATTTTT‑AAAAAATTAATTTTAACTTTTAAAAAATA‑CCTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAgg                                                                                         <  2:2286834/117‑1 (MQ=255)
                                        aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTGAATAATAAATTTTAgtt                                                                                        >  2:1539460/1‑126 (MQ=255)
                                         ttaataaAATAAAAATATTATTTTTTTTTATATTTTTTTTTTTTTTAA‑ATTTTT‑TAAAAATTTATTTGAAATTTTAAAAAATTTCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                        <  1:408118/127‑1 (MQ=255)
                                            aGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTA‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTATTTTTTTTTAATAATTGAAAAATAAAATATAAGTAttta                                                                                   >  1:773906/1‑127 (MQ=255)
                                             ttaactaaaactaTTTTATTTTTTTTTTTTTTTTTTATTTGCAA‑ATTTTT‑AAAAAATTAATTTGAAATTTTAAAAAATTTC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAtttt                                                                                   <  1:2424452/126‑1 (MQ=255)
                                               aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTA‑AAT‑GAAATATAAATTTTATGTtttttttttt                                                                              >  2:2382358/1‑126 (MQ=255)
                                                actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATtttttt                                                                                >  2:1689390/1‑128 (MQ=255)
                                                aataaaaattTTATTTTTTTTTATATTTTTTGTATATTCAA‑ATTTTT‑AAAAAATTTATTTTTAATTTTAAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgtt                                                                                <  2:87644/126‑1 (MQ=255)
                                                 ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTA‑AATGGAAATATAAATTTTAGTTATttttttt                                                                               >  1:1955247/1‑127 (MQ=255)
                                                 ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAATGAAAAAAAAAATTTTATTTATtttttttt                                                                              >  2:521131/1‑126 (MQ=255)
                                                   aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATGTAAATATAAATTTTAGGTATtttttttta                                                                             >  1:818805/1‑125 (MQ=255)
                                                    aaaaattaatatttttAGATATTTTTTGTTAATTCAA‑AATTTT‑AAAAAATTAATTTTAAATTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTaa                                                                          <  2:1407532/117‑1 (MQ=255)
                                                       ctaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGTAAATATAAATTTTATGTATTTTGTTGTGTAAGt                                                                        >  2:1357049/1‑128 (MQ=255)
                                                       ctaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTAAAATAATAATTTTAGTTATTTTTTTTTATaat                                                                         >  2:563088/1‑127 (MQ=255)
                                                         tttatttttttttttatttttttttTTTTTAA‑ATTTTT‑TAAAAATTTATTTTTAATTTTTAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTa                                                                       <  2:12999/127‑1 (MQ=255)
                                                         attatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATGTAATTATAAATTTTAGGTTTTTTTTTTTATaatat                                                                       >  1:1356538/1‑125 (MQ=255)
                                                         attatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTAATTTTGTTTTATAATTAt                                                                      >  1:479659/1‑128 (MQ=255)
                                                          ttatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTAATATTTTTTATAAGTa                                                                       >  1:874414/1‑128 (MQ=255)
                                                          ttatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTAAT‑ATTTAAATATTAATTTAAGTTATttttttttatatttata                                                                     >  2:262718/1‑117 (MQ=255)
                                                           tatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGTATTTTTTTTTATAATtatata                                                                   >  1:1147473/1‑128 (MQ=255)
                                                            atCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTAATTTATttttttttatatttttat                                                                    >  1:625688/1‑116 (MQ=255)
                                                                ttttAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAATTTTTAAGTTTTTTGTTTAATATGTATCTaaat                                                                >  2:1045834/1‑127 (MQ=255)
                                                                 tttAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTAGTAAAAAATAGCTTTTTTTTTTTTTTTTTAT‑TTAT‑AAAATATAAATTTAAGGTATATTTTTTTATAA‑TATACaaaaaaa                                                             >  2:778794/1‑128 (MQ=255)
                                                                  ttttttatTTTTTTTTTATTATA‑ATTTTT‑AAAAAAATAATTTTTACTTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTaaaaaaa                                                             <  1:1847907/123‑1 (MQ=255)
                                                                  ttAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTTTTTACTAAGTTGCTaaaaaa                                                              >  2:1876693/1‑128 (MQ=255)
                                                                  ttAGATATTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTTTTGTCTAATTATATAAAAAAATa                                                           >  1:2205142/1‑128 (MQ=255)
                                                                   attttatTTTTTTTTTTTTCAA‑ATTTTT‑AAAAAATTTATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAAt                                                            <  1:203274/124‑1 (MQ=255)
                                                                    tttttttttttttATTTTCAA‑ATTTTT‑AAAAAATTTATTTTTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTTTTTTGTTGTCTAAGTATCTaaaaatag                                                            <  2:1896813/123‑4 (MQ=255)
                                                                      tttttttttttttATTTAT‑ATTTTT‑AAAAAATTATATTTTACTTTTTAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                          <  1:910610/125‑1 (MQ=255)
                                                                      ttatTTTTTTTATATTAAA‑ATTTTT‑AAAAAATAAATTTTAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                          <  2:1466484/127‑1 (MQ=255)
                                                                      atatTTTTTGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTAGTTATTTTGTTTTGTAATTATATAAAAAATTat                                                          >  1:446140/1‑127 (MQ=255)
                                                                       ttttttttttttttTCAA‑ATTTTT‑TAAAAATTTATTTGAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                         <  1:2341750/126‑1 (MQ=255)
                                                                       ttttttttttATATGATA‑ATTTTT‑TAAAAATTAATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGaa                                                        <  1:2219322/126‑1 (MQ=255)
                                                                          tttttGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGTTATTTTTTTGTCTAATTATATAAAAAAATAGAAAgt                                                     >  1:1646682/1‑127 (MQ=255)
                                                                           ttttttttattaaa‑aTTTTT‑AAAAAAATAATTTTTAATTTTTAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAgg                                                     <  2:181754/116‑1 (MQ=255)
                                                                           ttttGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTATTTTTTTTTATAATTATCTAAAAAAATAaaaatg                                                     >  1:1913216/1‑126 (MQ=255)
                                                                           ttttGTATATGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGTATTTTTTTTTATAATTATATAAAAAAAAATaaataa                                                    >  1:124819/1‑125 (MQ=255)
                                                                            ttttttttattaa‑aTTTTATAAAAAAATAATTTTAAATT‑TAAAAAAAATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAgg                                                     <  2:690529/117‑1 (MQ=255)
                                                                             ttttataTTCAATATTTTA‑AAA‑AATTAAATTTAAATTTTAAAAAAT‑TTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaa                                                   <  1:156812/125‑1 (MQ=255)
                                                                             ttttataTTAAA‑ATTTTT‑AAAAAATTAATTTTAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaa                                                   <  1:54953/125‑1 (MQ=255)
                                                                             tttatatttaaa‑aTTTTT‑AAAAATTTATTTTTAATTTTTAAAAAA‑ATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                  <  2:314653/118‑1 (MQ=255)
                                                                              tgtattttaaa‑aTTTTT‑TAAAAATTAAATTTTAATTTTTAAAAATA‑TTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                  <  1:2061358/119‑1 (MQ=255)
                                                                                  tatGTAA‑ATTTTA‑TAAAAATTAATTTTAACTTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAat                                              <  2:2014621/128‑1 (MQ=255)
                                                                                  tatGCAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTATGTTTTTTTTTTTATAATTATATAAAAAAATAAAAAGAAAAAAat                                              >  2:597824/1‑128 (MQ=255)
                                                                                      cAA‑ATTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAATTTTTATTTATTTTTTTTTAAATGTATTTTAAAAAATAGAAAGGAAAAAATAttt                                          >  1:1320066/1‑127 (MQ=255)
                                                                                       aa‑aTTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTGAAATATAAATTTTAGTTTTTTTTTTTTATAATTAACTAAAAAAATATAAATGAAAAAATATtttt                                        >  1:2113659/1‑128 (MQ=255)
                                                                                       aa‑aTTTTT‑AAAAAATTAATTTGAACTTGTAAAAAATAGCTTATTTATTTTTTTTTTATAT‑ATTAAAATA‑AAAATTTATTTAATTTATTTTTAAAAGATAAAAAAAAATAAAAATGAAAAAataaatta                                        >  1:2256568/1‑123 (MQ=255)
                                                                                        a‑aTTTTT‑ATAAAATTAATTTTTAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaa                                      <  1:736622/128‑1 (MQ=255)
                                                                                          aTTTTT‑AAAAAATTAATTTTTAATTTTTAAATATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaa                                      <  1:662634/128‑1 (MQ=255)
                                                                                            ttttttaaaaatttattTTAAATTTTATAAAATTTTTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTa                                       <  1:704957/119‑1 (MQ=255)
                                                                                                ataataatttattTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                 <  2:806995/123‑1 (MQ=255)
                                                                                                 aaaaaaTTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATGTAATTAAAAATTTAATGTTTTTTTTTTTATAAGTTTATAAAAAAAAATAAATGAAAAATTTTTTTTTAAAGTa                                 >  2:2456307/1‑128 (MQ=255)
                                                                                                  aaaaaataattTTAACTTGTAAAAAATAGC‑‑‑‑‑‑TTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTa                           <  1:513862/122‑1 (MQ=255)
                                                                                                     aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATTATTTATATATAAATTTTATTTTTTTTGTTTTATATTTATATAAAAAATTTAAATGTAAAAAATATTTTTAATAGTAATaat                            >  1:1995561/1‑126 (MQ=255)
                                                                                                     aattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAATTGTAATATAAATTTTTGGTATTTTTTTTGCAAAATATAAAAAAAAAAACAAATGAAAAAATATATATAAAAATAAAAca                            >  2:2320031/1‑127 (MQ=255)
                                                                                                      attaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAAAAAAAATTTTAGGTATTTTTTTGTCTAAGTTTAAAAAAAAATAGAAAGGAAAAAAAATTGTTAAAAGTaaaaat                            >  2:501196/1‑124 (MQ=255)
                                                                                                      attaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATGGAAATATAAATTTTAGTTATTTTTTTGTAAAAGTATATAAAAAAAAAAAAAGAAAAAAAT‑TTATTaaaaagataaaat                           >  2:2428285/1‑119 (MQ=255)
                                                                                                        taattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCAAATTATATAAAAAAATATAAAGGAAAAAATATTTTTAAAAGtaataataa                          >  2:2113715/1‑128 (MQ=255)
                                                                                                          attTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGATATATAATTTTTAGTTATTTTGTTGTAAAAGTATAAAAAAAAATAAAAATAAAAATATATTTTTAAAAGTAAAAATaaa                         >  1:2385947/1‑128 (MQ=255)
                                                                                                           tttGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTA‑AATTGAAAAAAAAATTTTATTTTTATTTTTTAAAAATTAAAAAAAAAAATAAAAATGAAAAAATATTTTAAAAATAAATAAAAAAat                       >  2:430454/1‑128 (MQ=255)
                                                                                                              gAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑TAATGTAAATATAAATTTTAGGTTTTTTTTTTTATAATTATATAAAAAAATATAAAGTAAAAAATATTGTTAAAATTAATAATAAAattat                    >  1:1522715/1‑128 (MQ=255)
                                                                                                              gAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTTTCAAAGTATCTAAAAAAATATAAAGGAAAAAAAATTTTTAAAAGTAATAAAAAAattat                    >  2:1918974/1‑128 (MQ=255)
                                                                                                              gAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTAAT‑ATGGAAAAATAATTTTTAGTTATTTTGTTTTGAAAATTTAAAAAAAAATAAAAATAAAAAAATATTTTTAAAATTAATAATAAAtttatt                   >  1:267240/1‑128 (MQ=255)
                                                                                                              gAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTTGGTATTTTGTTGTCTATGTATCTAAAAAAATACAACGTAAAAAAATTTGTTAAAAGTAATAATAAAattatt                   >  1:307440/1‑128 (MQ=255)
                                                                                                               aaCTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAATTATAAATTTTTGGTTTTTTGTTGTATAAGTATCAAAAAAAATATATAGTAAAAAATATTATTAATAATAATAATAAAattatt                   >  2:2159417/1‑128 (MQ=255)
                                                                                                                 ttttttaaaaaTATTTTTTTTTTTTTTTTTTTTTATAATGGTAATATAAATTTTAGGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                  <  2:933407/122‑1 (MQ=255)
                                                                                                                 cTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTGAAATATAAATTTTAGGTATTTTTTTTTAAAAGTATATAAAAAAATATAAAGTAAAAAATTTTTTTAATATTTATAATAAAATTAtttta                >  2:17475/1‑126 (MQ=255)
                                                                                                                 attttAAAAAATATCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                  <  2:1118329/124‑1 (MQ=255)
                                                                                                                     tAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTGAAATAAAAATTTTTGTTTTTTTTTTGTATAATTAAATAAAAAAATATAAAGTAAAAAATTTTTTTTAAATTAATAAAAAAATTTTTTTATGt             >  1:2172646/1‑128 (MQ=255)
                                                                                                                       aaaaaTAGC‑TTTTTTTTTTTTTTTTTTATATTGTAAATAAAAATTTTAGGTATTTTTTTGAGTAATTA‑AAAAAAAAATTAAAAAGAAAAAAAATTTTTTAAATTTATTAAAAAAATATTTaaatgaaa          >  1:1599164/1‑122 (MQ=255)
                                                                                                                           atatttttttttttttttttttttATAATTGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt        <  1:1693926/123‑1 (MQ=255)
                                                                                                                            atattttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta       <  2:1269048/124‑1 (MQ=255)
                                                                                                                                tttttttttttttttttttATAATGGAAATTAAATTTTTTCGTTTTTTGTTGAGTAAGTATCAAAAAAAAAAGAAAGGAAAAAATATTGTTAAATTTAATAATAAAATTATTAATTTTTAATaaaata   >  2:2058899/1‑126 (MQ=255)
                                                                                                                                 ttttttttttttttttttATAATTGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAATTAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACt  <  1:1727606/128‑1 (MQ=255)
                                                                                                                                 ttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTTTCTAAGTTTCTAAAAAAATTGAAAGTAAAAAATATTTTTAAAATTTATAATAAAATTATTAAATGTTTATTaaaaat  >  1:1008164/1‑126 (MQ=255)
                                                                                                                                 |                                                                                                                               
TAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTA‑AAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACT  >  CP016816/165124‑165378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.