BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 311148	616 (0.370)	404 (0.200) +TATA	94/192	17.5	33.4%	intergenic (‑71/‑243)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
*	?	CP016816	311149 =	888 (0.420)	404 (0.200) +TATA	94/192	17.5	33.4%	intergenic (‑72/‑242)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1326 total aligned reads displayed.

GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAA  >  CP016816/311022‑311276

gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATAcatt‑c‑a‑t‑‑‑‑t                                                                                                                                     >  2:1355834/1‑128 (MQ=255)

  aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tat                                                                                                                                   >  2:1631917/1‑128 (MQ=255)

     aGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatata                                                                                                                                >  1:767431/1‑128 (MQ=255)

     aGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatata                                                                                                                                >  2:3791607/1‑128 (MQ=255)

       ttGTAATAACTAATCGAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACTCACCTTATTAAAAAATAAAATACTTGTTACATACGATACAAAAAATATATAACATACATT‑C‑T‑A‑‑‑‑tataaata                                                                                                                              >  1:1261952/1‑128 (MQ=255)

       ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatata                                                                                                                              >  1:1784044/1‑128 (MQ=255)

       ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatata                                                                                                                              >  2:3706936/1‑128 (MQ=255)

       ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATACAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatata                                                                                                                              >  1:3704807/1‑128 (MQ=255)

         gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatataga                                                                                                                            >  1:2089713/1‑126 (MQ=255)

           aataaCTAATCCAAATGAACTTAAAATTGTAAATAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACAAT‑C‑A‑T‑‑‑‑tatatatatata                                                                                                                          >  2:3112178/1‑128 (MQ=255)

            ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatat                                                                                                                         >  2:740268/1‑128 (MQ=255)

            ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatat                                                                                                                         >  2:4248525/1‑128 (MQ=255)

               aCTAATACAAATGAACATAAAATATTAATTAACTTTTTCATTATACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatata                                                                                                                      <  2:1091421/128‑1 (MQ=255)

                cTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatat                                                                                                                     >  1:346818/1‑128 (MQ=255)

                cTAATACAAATGAACTTAAAATTTTAATTAAATTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatat                                                                                                                     <  1:4560358/128‑1 (MQ=255)

                 taatataaaTGAATTTATAATTTTAATAAAATTTTTAATTTTATACAAAAATTATAAAAAAATAAAATAATTGTTAAATAAGAATCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatata                                                                                                                    <  2:2182452/122‑1 (MQ=255)

                   atcaaaatcatattAAAATTTTTATTAACTTTTTAATTTTACAAACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATAAATT‑C‑A‑T‑‑‑‑tatatatatatatatata‑‑ta                                                                                                                <  1:1011972/116‑1 (MQ=255)

                   aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatata‑‑ta                                                                                                                >  2:3176360/1‑128 (MQ=255)

                    tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatata‑‑tat                                                                                                               >  2:2876617/1‑128 (MQ=255)

                     aaaaattaaattAAAATTTTAATTAAATTTTTCATTTTAAACACACCTTATTAAAAAATAAAATACTTTTTACATAATATTAAAAAAATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatata‑‑tata                                                                                                              <  1:1583569/126‑1 (MQ=255)

                       aaaTCAACTAAAAATTGTAATTAACTTTTTCATTTTACACACCCAATATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatata‑‑tatata                                                                                                            <  2:1505111/128‑1 (MQ=255)

                        aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑tatatatatatatatata‑‑tatataa                                                                                                           >  2:3620299/1‑127 (MQ=255)

                          tcaaCTTAAAATTTTATTTAACTTTTTCATATTAAACACCCCTAATAAAAAAATAAAATACTTTTTACATTATATTATAAACATATATAACATAAATT‑C‑A‑T‑‑‑‑tatatatatatatatata‑‑tatatat‑‑at                                                                                                       <  1:3099711/126‑2 (MQ=255)

                          tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑aa                                                                                                       >  1:4061918/1‑128 (MQ=255)

                                tAAAATTGTTTTTATATTTTTCATTTTAGACACCACTTATTAAAAAAATAAATATTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑T‑T‑TATATATATATATA‑‑TATATAT‑‑AATGCAatat                                                                                               <  2:1569604/128‑1 (MQ=255)

                                    aTTGTATTTAAATTTTTCATTTTACACACCCATAATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAatat                                                                                               <  2:1953069/128‑1 (MQ=255)

                                     ttGTAATTATCTTTTTCTTTTTACAGACAACTTATTAAAAAATAAAATAATTGTTAAATAATATTCAAAAAATATATAACATACAAT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATg                                                                                              <  2:3378059/128‑1 (MQ=255)

                                         atttAAATATTTAATTTTACACAAAACTTATTAAAAAAAAAAATACTTTTTAAATAATATTCAAAACATATATATCATAAATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGaa                                                                                      <  2:1867719/126‑1 (MQ=255)

                                          aTTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGa                                                                                       <  2:1178826/128‑1 (MQ=255)

                                             aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑ATTGAAATATTTAAATGaaaa                                                                                    >  2:4184192/1‑128 (MQ=255)

                                             aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGaaaa                                                                                    >  2:1274160/1‑128 (MQ=255)

                                             aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGAAATATGTAAATGAAAata                                                                                  >  1:2723429/1‑128 (MQ=255)

                                             aaCTTTTTCATTTTACAAACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑‑‑‑‑‑‑ATAAATATATATATATA‑‑TATATAT‑‑AAAGCAATATTTAATTGAAAata                                                                                  >  1:2327138/1‑128 (MQ=255)

                                               cTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATATAAATTAAAata                                                                                  >  1:946654/1‑128 (MQ=255)

                                                 ttttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTAAATATGTAAATGATAatatt                                                                                >  2:524148/1‑127 (MQ=255)

                                                   ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AAATCAATATGAAAATGAAAATATg                                                                                >  2:598235/1‑128 (MQ=255)

                                                    taaTTTTACACAAACATAATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTataat                                                                         <  2:4148664/126‑1 (MQ=255)

                                                     cATTTTATACACAAATTATTAAAAAATAAAATAATTTATAAATAAGATTATAAAAATATATAACATAAAAT‑A‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGt                                                                              <  2:1784044/128‑1 (MQ=255)

                                                      aTTTTACACACCACTTATTAAAAAATAAATTATTTTTTACATAAGATTCAAAAAATATATAACATACATT‑A‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTataat                                                                         <  1:2959237/128‑1 (MQ=255)

                                                       ttttACACACACCTTATTAAAAAATAAAATACTTGTTAAATACTATTAAAAACATATATAACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGtat                                                                            <  2:1705332/128‑1 (MQ=255)

                                                         ttaaactcaccTTATTAAAAAATAAAATACTTTTTACATATGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGc                                                                      <  1:3548543/119‑1 (MQ=255)

                                                         ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTCAATATTTAAATTAAAATATGTTataata                                                                        >  1:528965/1‑128 (MQ=255)

                                                          taaacacacATTATTAAAAAATAAAATAATTTTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCa                                                                     <  2:3918894/125‑1 (MQ=255)

                                                           acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTAAATATTTATAAGAAAATATTGTataata                                                                        >  1:4208677/1‑128 (MQ=255)

                                                             acacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑TTATATATATATATATATATATA‑‑TATATAT‑‑AATTCAATATTTAAATTAAAATATTTTataata                                                                        >  1:2463602/1‑128 (MQ=255)

                                                             acacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑TATTCTATATATAATTAAAAATATGGTATTATAGaaa                                                                    >  1:1336697/1‑128 (MQ=255)

                                                              cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTCAATATGTAAATGAAAATATGTTataatataaaa                                                                   >  2:788784/1‑123 (MQ=255)

                                                              cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATCCAATATGTAAAAGAAAAAATGTTATAATATCAAc                                                                   >  2:1018515/1‑128 (MQ=39)

                                                              cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATTCAATATGTAAATGAAAATATGTTATAATAGAAAcag                                                                 >  2:876425/1‑126 (MQ=255)

                                                                caccatattaAAAAATAAAATACTTGTTACAAACTATTAAAAACATATATAACATACATT‑C‑‑‑‑‑‑‑‑‑ATA‑ATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                             <  1:4492134/123‑1 (MQ=255)

                                                                   attattaAAAAATAAAATACTTGTTACATACGATTCAAAAAATATATAACATAAATT‑A‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                            <  1:1424138/127‑1 (MQ=255)

                                                                    ttattaAAAAATAAAATACTTGTTTCATACGATTAAAAACATATATAAAATACATT‑‑‑A‑T‑‑‑‑T‑‑‑TATATATATATATA‑‑TATATAT‑‑AATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaaa                                                         <  1:2404485/128‑1 (MQ=38)

                                                                    ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                             <  2:4597861/128‑1 (MQ=255)

                                                                     tattaAATAATAAAATAATTTTTTAATAAGATTAAAAAAATATATAAAATAAATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                            <  1:1180860/128‑1 (MQ=37)

                                                                     tattaAAAAATAAAATTATTTTTAAATACGATTCAAAAAATATATAATATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                            <  1:3365726/128‑1 (MQ=39)

                                                                     tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATACATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTTtat                                                            >  2:4518256/1‑128 (MQ=255)

                                                                     tattaAAAAATAAAATACTTGTTAAATACGATTCAAAACATATATAACATAAATT‑C‑A‑T‑‑‑‑TATATATATATATATATATTTATTTAT‑‑AATGAAAAATCAATAAAAAAATTTGTTataataagacaattat                                                              >  1:66054/1‑118 (MQ=255)

                                                                     tattaAAAAATAAAATAATTTTTATATAATATTCAAAACATATATAACATACATT‑A‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                            <  1:1501471/128‑1 (MQ=39)

                                                                        taAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAATTGAAAATATGGTATAATAGCAACAGTTTATaaa                                                         >  1:1990833/1‑128 (MQ=255)

                                                                         aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                        <  2:2763961/128‑1 (MQ=255)

                                                                          aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AAAAAAATATGTAAATAAAAATATTATATAATAAAAACAATTTATaaata                                                       >  1:2239227/1‑126 (MQ=255)

                                                                          aaaaaTAAAATACTTGTTAAATACGATTAAAAAAATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                       <  2:2089713/128‑1 (MQ=255)

                                                                          aaaaaTAAAATAATTGTTACATAAGATTAAAAAAATATATAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaa                                                     <  2:2461493/128‑1 (MQ=255)

                                                                            aaataaaataATTTTTAAATAATATTAAAAAAATATATAACATATATT‑CAA‑TA‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                       <  2:3453351/128‑1 (MQ=255)

                                                                             aataaaataaTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                  <  2:332370/128‑1 (MQ=255)

                                                                             aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGATATATGTAAATGAAAATATGTTATAATATCAAGCGTTTATATAgaa                                                      >  1:2155777/1‑126 (MQ=255)

                                                                              ataaaataCTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATTTAAATTAAAATATGTTATAATAGCAACAGTTTATAAAGTaaaa                                                   >  2:4328532/1‑128 (MQ=255)

                                                                               taaaataCTTGTTACATACTATTCAAAACATATATAACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaa                                                    <  1:2792499/128‑1 (MQ=255)

                                                                                 aaataCTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑TTATATATATATATATATATATA‑‑TATATAT‑‑AATGAAATATTTAAATGAAAATATGTTATAATAGAAAAAGTTTataaaataaa                                                    >  2:1449696/1‑128 (MQ=25)

                                                                                  aataCTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AAATCTATATTTAAATAAAAATATTGTATAATATAACGAGTTTATAAAGTAAAAAAAt                                               >  2:3039862/1‑128 (MQ=255)

                                                                                     aattGTTACATACTATTCAAAAAATATATAACATAAATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                          <  1:3636300/126‑1 (MQ=255)

                                                                                     aCTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATTTAAATTAAAATATTGTATAATATCAAACGTTAAAAAAGTAAAAAAATaat                                            >  1:839795/1‑126 (MQ=38)

                                                                                     aCTTGTTACATAAGATTCAAAACATATAAAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                          <  1:3761925/128‑1 (MQ=255)

                                                                                        tGTTTCATACTTTTCAAAACATATATTAGATAGATT‑‑‑‑‑T‑‑‑‑TTTATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                       <  1:3923825/128‑1 (MQ=255)

                                                                                        tGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATATAAAAAGCAAAATAAAAAAGAAAATATTTTATAATAAAAAAATTATATATATTAAAAAAATAgaa                                           >  2:4417462/1‑126 (MQ=255)

                                                                                         gTTACATACGATTCACAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAA‑‑AATACAATATATAAAAAAAAATATGTAATAATATCCCACGTATATAAAGTaataaaaaaatatca                                        >  1:3046618/1‑120 (MQ=255)

                                                                                          ttACATACGATTCAAAACATATATAACATACATT‑C‑A‑TTATATATATATATATATATATA‑‑TATATAT‑‑AATGCAATATTTAAATGAAAATATGTTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTa                                           >  2:464879/1‑128 (MQ=255)

                                                                                          ttACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGAAATATGTAAATGAAAATATTGTATTATAGAAACATTTTATAAAGTAAAAATATATtatata                                       >  1:1679838/1‑128 (MQ=37)

                                                                                            tcatattatacAAAACATATATATAATATATTAT‑ATT‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                       <  1:4417462/118‑1 (MQ=255)

                                                                                            aCATACGATTCAAAACATAAATAACATACATT‑C‑A‑‑‑‑‑‑TA‑ATATATATATATATA‑‑TAAATAT‑‑AAAGAAATATCTAAATGAAAATATTGTATAAAAGAAACATTTAATAAAGTAAAAAAATATAAAATAaact                                   >  2:2338904/1‑128 (MQ=255)

                                                                                             cATACTATTTAAAACATATATAATATACATT‑A‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtac                                    <  1:2592692/128‑1 (MQ=255)

                                                                                              aTACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTAAATATATAAATGAATATATGATATAATATCAACAGTATATATAGTAAAAAAATAGTAAAtataat                                   >  2:2017601/1‑126 (MQ=38)

                                                                                               tACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTCAATATTTATATGAAAATATGGTATAATAGCAACCTTTTATAAATTAAAAAAATAGTAAATAtacta                                  >  1:19061/1‑128 (MQ=39)

                                                                                                 ctaTTAAAAAAATATATAAAATATATT‑A‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                              <  1:4624804/126‑1 (MQ=255)

                                                                                                      cAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTCAATATTTAAATTAAAATATTGTATAATATCAACCGTTTATAAATTAAAAAAATATTATATATAATAattatta                           >  2:3519285/1‑127 (MQ=37)

                                                                                                        aaaCATATATAACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTTAATGAATATATGGTATAATAGCACCCGTTTATAAAGTATAAAAATAGTAAATATACTACTTAtat                           >  1:4121183/1‑126 (MQ=255)

                                                                                                            atatatAACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCTATATGTAAATGATAATATGGTATAATAGCAACAGGTTATAAAGTATAAATATAGTATATATACTACTTATTTACtaatat                   >  1:4272779/1‑127 (MQ=255)

                                                                                                             tatataACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                  >  1:2668062/1‑128 (MQ=255)

                                                                                                              atataACATACATT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                     <  1:3176360/128‑1 (MQ=255)

                                                                                                                ataACATACATT‑C‑A‑TTATATATATATATATATATATA‑‑TATATAT‑‑AATGAAATATATAAATGAAAATATTTTATAATATCAACATTTTATAAATTAAAAAAATAGTAAATATACTAATTATTTACtaat                     >  2:3870793/1‑128 (MQ=25)

                                                                                                                ataACATACATT‑C‑A‑T‑‑‑‑‑‑TATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGAAAAAGTTTATAAAGAAAAAAAATATTAAATATACTAATTATTATCTAATAAAATc               >  2:2670057/1‑128 (MQ=255)

                                                                                                                   acatacatT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCt              >  2:4044734/1‑128 (MQ=255)

                                                                                                                    catacatT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AAAGCAATATGTAAATTAAAATATGTTATAATAGAAACAGTTTATATAATAAAAAAATAGTAAATAAAATAAATATTAACTAATAAAAtata             >  1:3256419/1‑128 (MQ=255)

                                                                                                                     atacatT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATTAAAATATGTTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATATACTAATAATATCt              >  2:2547508/1‑128 (MQ=255)

                                                                                                                     atacatT‑C‑A‑TTA‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGAAATATGTAAAATAAAATATGATATAATAGCAACCTTTTATAAAGTAAAAAAATAGAAAATATACTACTTATTTAATAATAatatat              >  1:1118208/1‑126 (MQ=37)

                                                                                                                     atacatT‑A‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTACAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt            <  2:2939380/128‑1 (MQ=255)

                                                                                                                      tacatT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATTATATATATAAATAAAAATATTTTATTATAGACAAAGTTTATAAATAAAAAAAATAGTATATATAATAGATATTAAATAAAAAAATCTAtt           >  1:3835625/1‑128 (MQ=16)

                                                                                                                          ataaattcattatatatatatatatatata‑‑tatatat‑‑aATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt              <  1:600063/116‑1 (MQ=255)

                                                                                                                           t‑c‑a‑t‑‑‑‑tATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttat      <  1:2876617/128‑1 (MQ=255)

                                                                                                                                      tatatatatatatatata‑‑tatatat‑‑aATTAAATATGTAAATGAAAATATGGTATAATAGCAACCTTTTATAAATTAAAAAAATAGTAAATAAACTAATTATTTAATAATAAAATATATTTTTATATaa  >  2:2402464/1‑128 (MQ=255)

GTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATT‑C‑A‑T‑‑‑‑TATATATATATATATATA‑‑TATATAT‑‑AATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAA  >  CP016816/311022‑311276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.