New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =2283 (0.750)385 (0.140) 104/220 18.1 16.7% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 1853 (0.690)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2628 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAA  >  CP016816/165126‑165382
                                                                                                                                  |                                                                                                                                  
  atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATAAATTTGAACTTGTTAAAAATAGC‑‑tttttt                                                                                                                                  >  2:6487801/1‑128 (MQ=255)
   tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttttt                                                                                                                                 >  1:5525330/1‑128 (MQ=255)
    ttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttt                                                                                                                                >  1:5176009/1‑128 (MQ=255)
         ttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑‑ttttttttttttt                                                                                                                           >  1:1000505/1‑128 (MQ=255)
         ttCATTAATTAATATCACTTTTAATAATTATTAATAAACAAAAAATATTATCTTTTTAGTTATTTTTTGTATA‑TGAAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑‑ttttttttttttt                                                                                                                           <  1:844635/128‑1 (MQ=255)
          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tatttttttttttt                                                                                                                          >  2:400984/1‑128 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttttttttttt                                                                                                                        >  1:6437688/1‑128 (MQ=255)
            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAAAACC‑‑tttttttttttttttt                                                                                                                        >  2:4460940/1‑128 (MQ=255)
             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tatttttttattttttt                                                                                                                       >  2:2184707/1‑128 (MQ=255)
             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAAAAGC‑‑ttttttttttttttttt                                                                                                                       >  2:3281022/1‑128 (MQ=255)
              tAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttttttttttttt                                                                                                                      >  2:6107789/1‑128 (MQ=255)
              tAAATTATTGCACTTTTATTAATTTTTAATAAAATAAAAATATTATATTTTTTTATATTTTTTTTATA‑TTCAAATTTTTAAAAAATTAATTTTAACTTTTAAAAAATATC‑‑ttttttttttttttttta                                                                                                                      <  2:732626/128‑2 (MQ=255)
                aTTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTtata                                                                                                                    >  1:1500255/1‑128 (MQ=255)
                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑tttttttttttttttttttta                                                                                                                   >  2:5921219/1‑126 (MQ=255)
                  ttATCGCACTTGTATGAATTAGTAAGAAACTAAACCTATTATCTTTTTAGATATTTTTTGTATA‑TTCAAATTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑‑ttttttttttttttttttataa                                                                                                                  >  1:4718250/1‑124 (MQ=255)
                   tATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttttttttttttttttttata                                                                                                                 >  2:5017749/1‑124 (MQ=255)
                    aTCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑ttttttttttttttttttttattg                                                                                                                >  2:2277807/1‑123 (MQ=255)
                     tcgtagttGTATTAATTAGTAATAAAATAAAAAAATTATTATTTTATATATTTTTTTTTTT‑TTCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAAAATC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑gg                                                                                                             <  1:3064937/122‑1 (MQ=255)
                     tagCACTTGTATTAATTAGTAAGAAAAAAAAACTATTATCTTTTTAGATTTTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATATAAT‑gg                                                                                                             <  2:1541721/126‑1 (MQ=255)
                       gCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAAtata                                                                                                             >  1:742245/1‑125 (MQ=255)
                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑TTAAata                                                                                                        >  1:93722/1‑128 (MQ=255)
                            tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTtaattaaattataa                                                                                                        >  2:6339911/1‑116 (MQ=255)
                             ttATGAAATAGTAACAAAATAAAACTAATATCTTTTTAGATATATTTTGTTTA‑TGCAAAATTTTTAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑‑GTTTTTTTTTTTTTTATAAT‑GGAAATATAAAtt                                                                                                  <  1:2323939/127‑1 (MQ=255)
                             gtatttaTTAGTAATAAAATAAAAATTTTATCTTTTTAGATATTTTTTTTATA‑TTCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAAAAGC‑‑‑‑‑‑TTTTTTTTTTTTTTTATAAT‑GGAAATATAAAtt                                                                                                  <  1:443092/122‑1 (MQ=255)
                              tttGAAATATTAATAAAATAAAAATATTTTTTTTTTTTTTATTTTTTTTTAT‑TGCAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAAAATCT‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAAtata                                                                                                      <  2:309720/126‑1 (MQ=255)
                               ttGAATTTTTAATAAAATAAAAATATTATCTTTTTATATTTTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTTAAATTGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAAtt                                                                                                  <  2:3569796/127‑1 (MQ=255)
                               aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTAAAAT‑TTAAATATAAAt                                                                                                   >  2:1750670/1‑128 (MQ=255)
                                  aaTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑GAAAATATAAATTTTa                                                                                               >  1:3446043/1‑128 (MQ=255)
                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑GAAAATATAAAtttttgtt                                                                                            >  2:2054888/1‑124 (MQ=255)
                                       ttaattaaattaaaataTTTTATTTTTATTTATTTTTTTTTTT‑TTTTAATTTTTAAAAAATTAATTTTTAATTTTAAAAAAT‑TT‑‑GATTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTa                                                                                           <  1:183923/117‑1 (MQ=255)
                                         tataaaattaaaataTTTTATTTTTATTTTTTTTTTGTTTA‑TGCAAATTTTTTAAAAATTAATTTTAAATTTTAAAAAAT‑‑T‑‑TCTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGGTAttt                                                                                        <  1:6207627/119‑1 (MQ=255)
                                         aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTTGTTAtt                                                                                         >  1:5442570/1‑128 (MQ=255)
                                          cttactttctaatattatTTTTTTATATATTTTTTGTATA‑TTCTAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTAttt                                                                                        <  1:679200/116‑1 (MQ=255)
                                          aGAAAATAAAAATATTATCTTTTTATTTATTTTTTGTATA‑TTCAAATTTTTAAAAAATTTATTTTAAATTGTAAAAAATATC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTAttt                                                                                        <  1:2230636/128‑1 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTT‑TAAT‑TTAAATTAAAATTTTAATTAttttt                                                                                      >  2:1910476/1‑127 (MQ=255)
                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GTTATTTTAAATTTTAGTAAttttt                                                                                      >  2:2654832/1‑127 (MQ=255)
                                              actaaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑TTAAATATATTTTTTTGttttttttttt                                                                                   >  2:5323931/1‑127 (MQ=255)
                                                taaaactaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGTTATTttgttttat                                                                                >  2:6218181/1‑124 (MQ=255)
                                                ataaaaaattatATTTTTTAATTTTTTTTGTATA‑ATCAAAATTTAAAAAAATAAAATTTAAAATTTAAAAAAAATCATTTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTttgt                                                                                     <  2:1439684/121‑1 (MQ=255)
                                                  aaaattatataTTTTTATATATTTTTTTTTTA‑TGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATATC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCt                                                                                <  1:5361940/121‑1 (MQ=255)
                                                    actaTTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑TAAAATAAAAATTTTAATTATtttttttaataa                                                                              >  1:4161809/1‑122 (MQ=255)
                                                     attttatTTTTTTATATTTTTTTTTTATATTTAAAATTTTTAAAAAATTATTTTTAAATT‑TTAAAAATA‑T‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAg                                                                             <  1:3710205/125‑1 (MQ=255)
                                                        tttttttttttTATATTTTTTTTTTA‑TTCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATTTC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTAt                                                                          <  1:5277835/123‑1 (MQ=255)
                                                        ttatCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTT‑TAAT‑TTAAATAAAAATTTTTGTTTTTTTTTTGTCTaataaa                                                                          >  2:382603/1‑124 (MQ=255)
                                                         tataTTTTTAAATTATTTTTTTAAA‑TTAAAATTTTTAAAAAATAAATTTTTAATTTTAAAAAATATC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATc                                                                         <  2:277889/128‑1 (MQ=255)
                                                         tatTTTTTTTTATATTTTTTTTATA‑TTCAAATTTTTAAAAAATTAATTTTAAATTGTAAAAAATATC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATc                                                                         <  2:5132962/128‑1 (MQ=255)
                                                         tatCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GAAAATATAAATTTTAGTTATttttttttaaaattat                                                                          >  2:5411683/1‑118 (MQ=255)
                                                          atCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑TGAAATATAAATTTTATGTATTTTTTTTTATAATtatata                                                                       >  1:585465/1‑128 (MQ=255)
                                                              ttttAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAAAT‑TTAAATATAAATTATATTTATTTTATTGTATaataaaataaaa                                                                    >  2:6004771/1‑118 (MQ=255)
                                                                ttAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAATAAT‑TTAAATATAAATTTTAGGTTTTTTTTTTAATAATTATATaaaaaa                                                                  >  1:6329281/1‑128 (MQ=255)
                                                                 tAGATATTTTTTGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑TTAAAATAAAATTTTATGTATTTTTTTTTCTAATTTTAaaaaaaaa                                                                 >  1:3323706/1‑128 (MQ=255)
                                                                  atatatTTTTTTTATA‑TTTAAATTTTTAAAAAATTTATTTTAAATTTTTAAAAAT‑‑T‑‑TCTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATa                                                               <  1:2906419/126‑1 (MQ=255)
                                                                   ttttttttttttttt‑tGTAATTTTTTTAAAAATTTATTTGTAATTGTTAAAAAT‑‑T‑‑TGTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                              <  1:391618/124‑1 (MQ=255)
                                                                    tttttttttttttA‑TTAAAATTTTTAAAAAATTTAATTTAACTTTTAAAAAAATGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAg                                                              <  1:4976003/125‑1 (MQ=255)
                                                                    attttttttttATT‑TGCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGa                                                             <  2:343743/125‑1 (MQ=255)
                                                                         ttttGTATA‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAAT‑GGAAAAAAAAATTTTAGTTAATTTTTTTAATATTTATCAAAAAAAAAAGaaataaa                                                       >  2:1304135/1‑124 (MQ=255)
                                                                             ttata‑TTTAATTTTTTAAAAAATTAATTTTTAATTGTTAAAAAAATT‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTGAGTATCTAAAAAAATAGAAAGGaaa                                                      <  2:1117947/127‑1 (MQ=255)
                                                                              tata‑TGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑TTAAATATAAATTTTATGTATTTTTTTTTATAATTTTATAAAAAAATATAAAGTaaaaaa                                                   >  1:2657176/1‑128 (MQ=255)
                                                                                ta‑tGTAAATTTTTAAAAAATTAATTTTAATTTTTAAAAAAT‑‑T‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAata                                                 <  1:5711174/128‑1 (MQ=255)
                                                                                 tatttataTTTTTAAAAAATTTATTTTTAATTTTAAAAAATA‑T‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTCAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAat                                                  <  1:5598594/121‑1 (MQ=255)
                                                                                   tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAAT‑TTAAATATAAATTTTAGTTATTTTTTTTTATAATTATATAAAAAAATATAAAGTAAAAAATAttt                                              >  1:3202026/1‑127 (MQ=255)
                                                                                   tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAAT‑TTAAAAATTAATTTTAGGAATTTTGTATTAAAATTTTCTAAAAAAATAAAAAGAAATAAatatat                                              >  1:6044472/1‑126 (MQ=255)
                                                                                      aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTATTTATTTTTTTGAATAATTATAAAAAAAAATTAAAATGAAAATATATtttt                                            >  2:2916376/1‑128 (MQ=255)
                                                                                        aTTTTTAAAAAATTTATATTAAATTTTAAAAAATA‑T‑‑GTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTa                                           <  2:4302826/128‑1 (MQ=255)
                                                                                         ttttAAAA‑AATTAATTTTAAATTTTATAAAAT‑‑T‑‑TCTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaaaa                                        <  1:2150681/128‑1 (MQ=255)
                                                                                              taataatttattTTTAATTTTAAAAAATA‑T‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                     <  1:4049984/124‑1 (MQ=255)
                                                                                              taaaatttaattTTAAATTTTAAAAAATA‑T‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGTTATTTTGTTGTCTTAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                     <  2:4161809/122‑1 (MQ=255)
                                                                                               aaaaattaattTTAACTTTTAAAAAAAAG‑‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATa                                  <  2:5238961/125‑1 (MQ=255)
                                                                                                 aaattaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑TTAAATAAAAATTTTAGTTTTTTTTTTGTATAATTATATAAAAAAAAAAAAAGAAAAAAATATTTTTAAAATTaaaaa                                 >  2:1621687/2‑125 (MQ=255)
                                                                                                  aattaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATATT‑GGAAATTTAAATTTTAGTTTTTTTTTTTTATAATTATTTAAAAAAATATAAAGTAAAAATTATTTTTaaatttattaa                                 >  1:3560305/1‑120 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTTTAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTGTAATTATCTAAAAAAATAGAAAGGAAAAAATATTTTTAAAAGTAATaa                                 >  1:4855892/1‑127 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTT‑TAAT‑GGAAATATAAATTTTATTTATTTTGTTGTCTAAGTATATAAAAAAATATAATTTAAAAATTATTGTTAAAATTAATaat                                >  1:2047172/1‑126 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATATT‑GAAAATAAAAATTTTAGTTTTTTTTTTGTAAATTTATATAAAAAAAAAAAAATGAAAAAATTTTTTTAAAATAAataata                               >  2:5588648/1‑128 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATATT‑GAAAATTAAATTTTTAGTTTTTTTTTTTTGTAATTTAATAAAAAAATAAAAAGTAAAAAATTTTTTTaaatttaaaaataa                              >  1:6144551/1‑117 (MQ=255)
                                                                                                   attaattTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAAT‑TGAAATATAAATTTTAGTTATTTTTTTTTATAAGTATATAAAAAAATATAAAGTAAAAAATATTTTTAAAATtaataataa                              >  2:6603666/1‑128 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGTTTTTTTTTTGTAAAATTATATAAAAAAATAAAAAGTAAAAATTTTTTTTAAAATTAataata                               >  2:2514159/1‑128 (MQ=255)
                                                                                                    ttaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GGAAAAAAAAATTTTAGGTTTTTTTTTGTCTAAGTATCTAAAAAATTATAAAGTAAAAAATATTTTTAAAAGTAataata                               >  1:1597276/1‑128 (MQ=255)
                                                                                                      aattTTAAATTTTTAAAAATATC‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTaa                              <  1:2780314/128‑1 (MQ=255)
                                                                                                      aattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGTTATTTTGTTGTGTAAGTATATAAAAAATATTAAAGAAAAAAATATTGTTAAATGTAATACTaaat                            >  1:2529132/1‑127 (MQ=255)
                                                                                                       attTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAATTTTTAGGTATTTTTTTTTCTAATTTTATAAAAATTTATAAAGGAAAAATTTTTTTTTAAATTAATATTaaaa                            >  1:1152955/1‑128 (MQ=255)
                                                                                                         ttGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTAAAAT‑TTAAATATAATTTTTTTTTTTTTTTTTTTATATTTATAAAAAAAAATATAAATTAAAAAATTTTTTTAAAAATAATAATAAAatt                          >  1:1299393/1‑128 (MQ=255)
                                                                                                           gAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGTTTTTTTGTTGTATAAGTATCTAAAAAAATAGAAAGTAAAAAATATTGTTAAAAGTAATACTAAAAtttttt                      >  1:5073534/1‑128 (MQ=255)
                                                                                                             aCTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGTTATTTTTTTGTATAAGTAAATAAAAAAATATAAAGAAAAAAAATTTTTTAAATTTAATAATAAAATTAttt                      >  2:551893/1‑128 (MQ=255)
                                                                                                              cTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTT‑TAAT‑GTAAATATAAATTTTAGGTTTTTTTTTGTATAATTATATAAAAAAAAAAAAAGTAAAAAATATTTTAAAAATTAATAAAAAAATTATTTa                     >  2:5712140/1‑128 (MQ=255)
                                                                                                              cTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGTTATTTTTTTTTATATTTATCTAAAAAAATATAAAGTAAAAATTATTTTTAAATGTAATAATAAATTTATTaaa                    >  1:6549065/1‑128 (MQ=255)
                                                                                                                 gTAAAAAATAGCT‑TTTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTATTTATTTTTTTGTATAATTATATAAAAAAATATAAATTAAAAAATATTTTTAAAATTAAAAATAAAATTATTaaa                    >  1:5955583/1‑128 (MQ=255)
                                                                                                                 gTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GTAAATATAAATTTTAGGTATTTTTTTTTTTTATTATATAAAAAAATATAATTAAAAAAATATTTTTAAAATTAATAATAAAATTATTTAAt                   >  1:1961324/1‑128 (MQ=255)
                                                                                                                 gTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAAT‑GTAAATATAATTTTTAGTAAATTTTTTTTATAATTATATAAAAAAAAATAAAGTAAAAAAATTTATTAAATTAAATAATaaataattttaattt                 >  2:823231/1‑116 (MQ=255)
                                                                                                                  tAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTT‑‑TAAT‑GGAAATATAAATTTTAGGTTTTTTGTTTTCTAAGTATATAAAAAAATAGAAAGGAAAAAATATTTTTAAAATTAATAATAAAATTATTTAAtttt                >  1:5789740/1‑128 (MQ=255)
                                                                                                                    tttttaatatttttttttttttttttttttATAAT‑TGAAATATAAATTTTATGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATg                  <  1:4593341/117‑1 (MQ=255)
                                                                                                                      aaaTAGC‑‑TTTTTTTTTTTTTTTTTTTATAAT‑TTAAATTTAAATTTAAGATATTTTTTTGTTTAATTTAAAAAAAAAATAAAAAGTAAAAATTATT‑TTAAAAATTATAAAAAAAATAttttaatgatta             >  1:2429526/1‑119 (MQ=255)
                                                                                                                         attttttttttttttttttttttttATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaat             <  2:5818792/122‑1 (MQ=255)
                                                                                                                         aaaaatattttttttttttttttttATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaat             <  2:2368992/121‑1 (MQ=255)
                                                                                                                          aaatatttttttttttttttttttATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt            <  1:429961/123‑1 (MQ=255)
                                                                                                                           tttttttttttttttttttttttATAAT‑GGTAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta           <  2:4627058/124‑1 (MQ=255)
                                                                                                                           aaattttttttttttttttttttATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta           <  1:1716922/124‑1 (MQ=255)
                                                                                                                              ttttttttttttttttttttATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTaaaa        <  2:3007605/127‑1 (MQ=255)
                                                                                                                              agctttttttttttttttttATAATGGGAAAAAAAAATTTTTGTTTTTTTGTGGGAAATGTAACAAAAAAAATAAAATGTAAAAAAATTTTTTAAAAGTAATAAAAAATTTATTTAATTtaaatataa         >  2:4832048/4‑124 (MQ=255)
                                                                                                                               agcttttttttttttttttATAAT‑GGAAATATAATTTTTAGGTTTTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTTTAAAAAGTAATAATAAAATTATTAAATGTTAATTAAAAc       >  2:3678712/4‑128 (MQ=255)
                                                                                                                                 ttttttttttttttttttTAAT‑GGAAATAAAAATTTTATGTTTTTTTTTTTATAATTTTAAAAAAAAATATAAATGAAAAAATTTTTTTAAAATTAATAATAAAATTATTTAATTTTAATTAAAAAtt     >  1:1416077/1‑128 (MQ=255)
                                                                                                                                  |                                                                                                                                  
ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATA‑TGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTTATAAT‑GGAAATATAAATTTTAGGTATTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAA  >  CP016816/165126‑165382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.