New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 1652471052 (0.570)399 (0.220) 70/250 30.5 27.4% intergenic (+211/‑331) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 165251 = 1061 (0.570)intergenic (+215/‑327) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1363 total aligned reads displayed.

TTGATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTA  >  CP016816/165120‑165373
                                                                                                                                |                                                                                                                               
ttGATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGACCTTGTAAAAAATa                                                                                                                                 >  2:3602761/1‑128 (MQ=255)
 tGATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAg                                                                                                                                >  1:1577408/1‑128 (MQ=255)
    taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTTTATGCTA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtt                                                                                                                             >  2:3985687/1‑128 (MQ=255)
    taataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtt                                                                                                                             >  1:3092682/1‑128 (MQ=255)
     aataTTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttt                                                                                                                            >  1:1854155/1‑128 (MQ=255)
      atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttt                                                                                                                           >  1:94347/1‑128 (MQ=255)
        atTTAGTTTCATTAATTTATCGCACTTGTATGAAATAGTAAGAAACTAAAACTATTATCTTTTTAGAAATTTTTTGTATATGCAA‑ATATTTAAAAAATTAATATTATCTTGTAAAAAATAgagtttaa                                                                                                                         >  2:2561738/1‑121 (MQ=255)
         tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttt                                                                                                                        >  2:752321/1‑128 (MQ=255)
         tttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttt                                                                                                                        >  2:2380036/1‑128 (MQ=255)
           tAGTTTCATTAATTTTTCGCACTTGTATGAATTAGTAAGAAACTAAAACTAATATCTTTTTAGATATTTTTTGTATATTCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttt                                                                                                                      <  1:2683539/128‑1 (MQ=255)
           tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttt                                                                                                                      >  2:2777232/1‑128 (MQ=255)
           tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttt                                                                                                                      >  1:2244040/1‑128 (MQ=255)
             ttttCAATAATTTATCTCACTTGTATGAATTATTAACTAAATAAAAAAATTATATTTTTATATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTTAACTTGTAAAAAAAAGCttttttttttt                                                                                                                    <  1:3301739/127‑1 (MQ=255)
             gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCttttttttttt                                                                                                                    >  2:500023/1‑128 (MQ=255)
              tttCATTTATTATTCGGAAATGTTTGAATTATTAAGAAACTAAAACTAATATCTTTTTATATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACATGTAAAAAAAACCtttttttttttt                                                                                                                   <  1:3535664/128‑1 (MQ=255)
              tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGAtttttttttttt                                                                                                                   >  2:854376/1‑128 (MQ=255)
              tttAATTAATTTATAGCAATTTTATTAATTAGTAATAAAATAAAACAATTAATTTTTTATATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttt                                                                                                                   <  1:3719601/128‑1 (MQ=255)
               ttaaTTAATTTATCGGACTTGTATTATATAATAATAAACTAAAAATATTATATTTTTAGATATTTTTTGTATATTCAA‑ATTTTTAAAAAATTAATTTTAACTTGTAAAAAAAACCttttttttttttt                                                                                                                  <  1:1982524/125‑1 (MQ=255)
               ttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATCttttttttttttt                                                                                                                  >  2:1186809/1‑128 (MQ=255)
                  aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCtttttttttttttttt                                                                                                               >  2:2211360/1‑128 (MQ=255)
                  aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGAtttttttttttttttt                                                                                                               >  1:757643/1‑128 (MQ=255)
                  aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGAttttttttttttttat                                                                                                               >  1:3789843/1‑126 (MQ=255)
                          aTCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTtataaatg                                                                                                       >  1:468427/1‑124 (MQ=255)
                                 ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTAAAataa                                                                                               >  1:1799181/1‑127 (MQ=255)
                                 ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAAtata                                                                                              >  2:3519293/1‑128 (MQ=255)
                                  tGTATTAATTATTAATAAAATAAAAATATTATATTTTTATATATTTTTTTTATATTCAA‑ATTTTTAAAAAATTAATTTTAACTTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                            <  2:3447387/128‑1 (MQ=255)
                                   ttttttatttttAAGAAAATAAAAAAATTTTAATTTTATATATTTTTTGTTTAATCAA‑ATTTTTAAAAAATTAATTTTTAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                            <  2:1265254/117‑1 (MQ=255)
                                    tttttatttttaataaAATAAAAATTTTTTTTTTTTTTTTATTTTTTTTTTATTTAA‑ATTTTTAAAAAATTAATTTTTAATTTTAAAAAAT‑‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATAAAt                                                                                           <  2:2947415/118‑1 (MQ=255)
                                    tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑TTTTTAAAA‑AATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTATTTATAATTTAAATATAAAtt                                                                                          >  1:2845053/1‑128 (MQ=255)
                                    tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATTATTTAAATATaa                                                                                             >  1:3432532/1‑128 (MQ=255)
                                     tttaaatattaataaAATAAAAATTTTATATTTTTATATATTTTTTTTATATTCAA‑AATTTTAAAAAATAAATTTGAACTTTTAAAAAAAAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                          <  2:1320332/119‑1 (MQ=255)
                                       tacatattAACAAACAAAAACAATTATCTTTTTACTTTTTTTATTTTAATGCAA‑AATTATAAAAAAATAATTTGAAAATTTAAAAAAAACC‑‑ATTTTTTTTTTTTTTTTATAATGGAAATATAAAtttt                                                                                        <  2:3765914/121‑1 (MQ=255)
                                         aTTACTAAGAAACTAAAAAAATTATATTTTTATATATTTTTTGTATTAGCAA‑ATTTTTAAAAAATTAATTTTAACTTTTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                    <  2:1874613/128‑1 (MQ=255)
                                           tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTA‑ATTTAAAATAAAAATTTAAgt                                                                                     >  1:3471613/1‑127 (MQ=255)
                                            attaataaAATAAAAATATTATATTTTTATATATTTTTTTTATATGTAA‑ATTTTTTAAAAATTAATTTGAAATTGTAAAAAATTGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                  <  2:3845783/126‑1 (MQ=255)
                                            aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTattta                                                                                   >  2:3014655/1‑124 (MQ=255)
                                             ttAAGCAACTAAAAATATTATTTTTTTTTTTATTTTTTGTTTAATCAA‑ATTTTTAAAAAATTAATTTTTACTTTTAAAAAA‑A‑TTCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                  <  2:3913566/127‑1 (MQ=255)
                                             gTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTT‑T‑ATTGAAATATAAATTTTTGTTAt                                                                                  >  2:1085818/1‑128 (MQ=255)
                                             gTAAGAAAATAAAAAAATTTTCTTTTTATATATTTTTTTTATATGCAA‑ATTTTTAAAAAATTAATTTGTAATTGTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                  <  2:2098902/128‑1 (MQ=255)
                                               aaGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑TCTATTTTTTTTTTTTTTTATAATTTAAATAAAATTTTTATGTAtta                                                                                >  1:2515569/1‑127 (MQ=255)
                                                ataaaataaaaattATATTTTTTTAGATATTTTTTTTATAATATA‑TTTTTTAAAAAATTAATTTGTAATTTTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAttt                                                                                <  1:2752460/126‑1 (MQ=255)
                                                aGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTAAAAATTAAAATAAAAATTTTATTTAtttt                                                                               >  2:1523609/1‑128 (MQ=255)
                                                 gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTAAAATATAAATTTAATTTAtttt                                                                               >  2:1939528/1‑128 (MQ=255)
                                                    actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAAATTAAAATAAAATTTTTaataatttttat                                                                            >  1:2615521/1‑117 (MQ=255)
                                                      taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATAAAATTTTTAGTTATttttttttaa                                                                        >  2:927433/1‑124 (MQ=255)
                                                      taaaaataTTATTATTTTTTTTAATTTTTTTATATTTAA‑ATTTTTTAAAAAATAATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑c                                                                        <  1:291544/128‑1 (MQ=255)
                                                       taaaataTTAATTTTTTACTTTTTTTTTGTTTATTCAATATTTTAAAA‑AAAAAAATTCAAATTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTa                                                                      <  1:1145545/127‑1 (MQ=255)
                                                       aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTATAAAATGTAAAATTAAATTTTTGTTATTTTTTTGT‑c                                                                        >  1:2162666/1‑128 (MQ=255)
                                                       aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAAAGTAAATATAAATTTAATTAATTTTTTTTT‑CTa                                                                      >  1:411046/1‑128 (MQ=255)
                                                        aaattaTTATATTTTTAGTTATTTTTTTTTAATTGAA‑ATTTTTAAAAAATTAAATTGAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTa                                                                      <  1:1206521/128‑1 (MQ=255)
                                                        aaaataTTTTTTTTTTTTTTATTTTTTTTATTATTAA‑TTTTTTTAAAAATTTATTTTTAATTTTTAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑Ct                                                                       <  2:1401004/128‑1 (MQ=255)
                                                          aattatatatttttttatattttttTTATATTAAA‑ATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAg                                                                    <  1:2425596/123‑1 (MQ=255)
                                                           aatttatTTTTTTTTATTATTTTTTTATATTCAA‑ATTTTTAAAAAATTAAATTTTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAg                                                                    <  2:3286613/125‑1 (MQ=255)
                                                            ttttatCTTTTTATATATTTTTTGTATATTAAA‑ATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTa                                                                  <  1:3636885/126‑1 (MQ=255)
                                                            tattatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGAAAAAAAAAATTTTAGtttttttttttaataatta                                                                   >  1:816496/1‑119 (MQ=255)
                                                            tattatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATTAAAATATAAAATTTATTTATTTTTTTTT‑ATAATTaa                                                                 >  1:2362133/1‑127 (MQ=255)
                                                            tattatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTATATAATTGAATTATAAATTTTAGTTATTTTGTTTT‑ATAAGTa                                                                  >  1:337329/1‑128 (MQ=255)
                                                            tattatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTAt                                                                 <  1:3011072/128‑1 (MQ=255)
                                                             attatCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTATGTATTTttttgtaaaattat                                                                  >  2:2033763/1‑120 (MQ=255)
                                                              tttatttttttGATATTTTTTGTATATTGAA‑ATTTTTAAATAATTAATTTGTACTTGTAAAAAATAG‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTAt                                                                 <  1:3200264/123‑1 (MQ=255)
                                                                  cTTTTTAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTAGTTATTTTTTTTT‑ATaatttaataaa                                                            >  1:2101125/1‑119 (MQ=255)
                                                                    ttttATATATTTTTTTTATATTTAA‑ATTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTaaaaaa                                                         <  1:534971/128‑1 (MQ=255)
                                                                    ttttAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTATTTATTTTTTTTT‑AAAAGAATATaaaa                                                           >  2:2844021/1‑128 (MQ=255)
                                                                    ttttAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTTATTTTTTTGT‑ATAATTATATaaaaaa                                                         >  1:228027/1‑128 (MQ=255)
                                                                      ttAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAATTATAAATTTTAGTTATTTTTTTTT‑CTAATTAAATaaaaaaa                                                        >  2:674420/1‑128 (MQ=255)
                                                                      ttAGATATTTTTTGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTAGGTATTTTTTTTT‑ATAATTATAAAAAAAAATa                                                      >  1:886102/1‑128 (MQ=255)
                                                                       tattttttttttttATTTTTAA‑ATTTTTTAAAAATTTATTTTTAATTTTTAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAAt                                                       <  1:597525/122‑1 (MQ=255)
                                                                        ttattttttttttATATTAAA‑TTTTTTTAAAAATTAATTTTTAATTTTTAAAAAT‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAg                                                     <  2:576100/123‑1 (MQ=255)
                                                                          ttatTTTTTGTATATGCAA‑TTTTTTAAAAAATTAATTTGTAATTGTAAAAAATTGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGa                                                    <  1:2025106/127‑1 (MQ=255)
                                                                              tttttGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTATTTTTTTTTTTTT‑ATAATTTTCTAAAAAAATATaatg                                                 >  2:1777870/1‑126 (MQ=255)
                                                                              tttttGTATATGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTATGTATTTTTTTGT‑ATAAGTATATAAAAAAATAaaaatta                                               >  1:1283845/1‑125 (MQ=255)
                                                                               ttttttttattaaa‑aTTTTTTAAAAATTAATTTTAAATTTTATAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGa                                               <  1:1009766/116‑1 (MQ=255)
                                                                                ttttattataaaa‑aTTTTAAAA‑AATTAATTTTAAATTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGaaa                                             <  1:3985687/117‑1 (MQ=255)
                                                                                  tGTATATTTAA‑TTTTTTAAAAAATTAATTTTAAATTTTATAAAATA‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGaaaa                                            <  1:3915845/128‑1 (MQ=255)
                                                                                   gtttatGCAA‑ATTTTTAAAAAATTATTTTGTACTTGTTAAAAATTG‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGaaaaa                                           <  2:159973/125‑1 (MQ=255)
                                                                                     atttgaaa‑aTTTTTAAAAAATTTATTTGAAGTTTTAAAAAA‑‑‑‑TTGTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAatat                                       <  2:2499724/122‑1 (MQ=255)
                                                                                        tGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATTTAAATATAAATTTTATTTATTTTTTTGT‑AAAATTAAAAAAAAAAATATAAATTAAAAAAAAtt                                      >  2:3386798/1‑128 (MQ=255)
                                                                                        tGCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGTTATTTTTTTGT‑ATAATTATATAAAAAAAATAAAAGTAAAAAatttat                                     >  2:3698915/1‑124 (MQ=255)
                                                                                         gCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTAGTTATTTTTTTTT‑ATAATTAAATAAAAAAATATaaaatatcggaatag                                      >  2:421609/1‑116 (MQ=255)
                                                                                         gCAA‑ATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTTT‑ATAATTATCTAAAAAAATATAAAGTAAAAAATAtttt                                    >  1:1719644/1‑126 (MQ=255)
                                                                                            a‑aTTTTTAAAAAATTTATTTTAAATTTTAAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTa                                  <  1:1611582/128‑1 (MQ=255)
                                                                                            a‑aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTT‑‑TAATGGAAATATAAATTTTAGTTTTTTTTTTTT‑ATAAGTATATAAAAAAATATAAATGAAAAAATATTTTTa                                  >  1:3840757/1‑128 (MQ=255)
                                                                                            a‑aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTATTTTTTTGT‑ATAATTATATAAAAAAATAGAAATTAAAAAATTTTGTTaa                                 >  1:3587149/1‑128 (MQ=255)
                                                                                              aTTTTTAAAAAATTAATTTTAACTTTTTAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaaa                                <  1:696308/128‑1 (MQ=255)
                                                                                              aTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAttt                                                                                <  2:3239166/81‑1 (MQ=255)
                                                                                               ttttTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTA‑AATGGAAAAATAATTATTATTTATTTTTTTTT‑ATAATTATATAAAAAAATAGAAATGAAAAAATATTTTTata                                >  1:636163/1‑126 (MQ=255)
                                                                                                tttAAAA‑AATTAATTTTAAATTTTTAAAAATA‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAg                              <  2:1464362/128‑1 (MQ=255)
                                                                                                tttAAAA‑AATAAATTTTAAATTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGt                             <  2:3181972/128‑1 (MQ=255)
                                                                                                     aaaaattatttTGAACTTGTAAAAAATAG‑‑GTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAt                          <  1:1428890/125‑1 (MQ=255)
                                                                                                     aaaaattaattTTTAATTGTAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAAt                          <  2:1017201/125‑1 (MQ=255)
                                                                                                     aaaaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAATTATAAATTTTAGGTTTTTTTTTGT‑ATAAGTATAATAAAAAATATAAATTAAAAAATATTTTTAAATTTAAt                          >  2:2690443/4‑128 (MQ=255)
                                                                                                       aaattaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTA‑GTATTTTTTTTTAATAATTAAAAAAAAAAAATAAAAGTAAAAAATATT‑TTAAAAATaaataa                       >  2:226796/2‑124 (MQ=255)
                                                                                                         attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATGTATTTTATTTT‑AAAATAAAAAAAAAAAATA‑AAAATAAAAAAAATTTTTaaaaaataaaaaaa                     >  2:1700270/1‑118 (MQ=255)
                                                                                                         attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTATAATGGAAATTAAAATTTTTGGTTTTTTGTTGT‑ATAAGTATATAAAAAAATATAAAGGAAAAAATATTTTTAAAAGTAATACTa                      >  1:3235359/1‑128 (MQ=255)
                                                                                                             attTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATAATGGAAATTAAAATTTTTTGTATTTTTTTTT‑ATAATTATATAAAAAAATAGAAAGAAAAAAATATTTTTAAAATTAATAATaaaa                   >  1:3144736/1‑128 (MQ=255)
                                                                                                                 gAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTT‑‑‑TAATGTAAAAATAAATTTTTGGTTTTTTTTTGT‑CTAAGTATATAAAAAAATAGAAATTAAAAAATTTTTTTAAAAGTATTAATAAAATTAttt             >  2:3101856/1‑128 (MQ=255)
                                                                                                                 gAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTATAATGGAATTATAAATTTTAGGTATTTTTTTTT‑ATATTTATATAAATAAATATAAATCAAAAAATTTTTTTAAAATTAAATCTAAAATTAttt             >  1:1045500/1‑128 (MQ=255)
                                                                                                                 gAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑ATAATTATCTAAAAAAATATAAAGGAAAAAATATTGTTAAAAGTAATAATATAATTATTTaa           >  1:1385714/1‑128 (MQ=255)
                                                                                                                  aaattttAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt             <  1:1492386/122‑1 (MQ=255)
                                                                                                                      tttAAAAAATA‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATg         <  1:134091/126‑1 (MQ=255)
                                                                                                                                |                                                                                                                               
TTGATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAA‑ATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGT‑CTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTA  >  CP016816/165120‑165373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.