Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913266,3580TG41.3% 111.7 / 14.1 64T66P (ACC→CCC) yafYlipoprotein, inner membrane; degP regulator; CP4‑6 prophage
Reads supporting (aligned to +/- strand):  ref base T (7/30);  new base G (26/0);  total (34/30)
Fisher's exact test for biased strand distribution p-value = 1.20e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTATTCCAGTTTGATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGTCATCACTTCTGTCATCGCATGCGAT  >  NC_000913/266218‑266499
                                                                                                                                              |                                                                                                                                             
gTATTCCAGTTTGATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTTGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGGAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAATCCTGCAAGTTGGGACCgg                                                                                                                                       <  2:352221/149‑1 (MQ=255)
   ttCCAGTTTGATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGGAAAAACCGCCAGGGGGGGCCGGATaa                                                                                                                                   >  1:206736/1‑150 (MQ=255)
     ccAGTTTGATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAAACTGCAAGGGGGGACCGGATaa                                                                                                                                   >  1:869316/1‑148 (MQ=255)
      cAGTTTGATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAagtag                                                                                                                               <  2:735888/151‑1 (MQ=255)
          ttGATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCa                                                                                                                            <  1:779292/150‑1 (MQ=255)
            gATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAAACTGCAAGGGGGGGCCGGGAAAGTAGGCAAcc                                                                                                                         >  1:95868/1‑151 (MQ=255)
             aTGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCt                                                                                                                        <  2:366473/151‑1 (MQ=255)
              tGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAAACCGCAAGGGGGGGCCGGGTAAGTAGGCaaac                                                                                                                         >  1:187260/1‑147 (MQ=255)
               gTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCtgt                                                                                                                      <  1:566349/151‑1 (MQ=255)
               gTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGGGGGGCCGGATAAGTAGTCAAcc                                                                                                                         >  1:146273/1‑148 (MQ=255)
               gTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAAACTGCCACGGGGGCGCCGGGAAGTAGGCAACCtgt                                                                                                                      >  2:557542/1‑151 (MQ=255)
                 tATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCtgtg                                                                                                                     <  2:498215/150‑1 (MQ=255)
                 tATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCtgtg                                                                                                                     <  2:378181/150‑1 (MQ=255)
                 tATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCtgtg                                                                                                                     <  1:787154/150‑1 (MQ=255)
                  aTCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGAc                                                                                                                   <  1:506196/151‑1 (MQ=255)
                    cGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGGGGGGCCGGATAAGTAGTCAACCTGTGAcc                                                                                                                  >  1:124949/1‑150 (MQ=255)
                    cGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGGGGGGCCGGAAAAGTAGTCAACCTGTGAcc                                                                                                                  >  1:585908/1‑150 (MQ=255)
                    cGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAAACTCCAAGGGGGGAGCGGGTaaagaggccaac                                                                                                                         >  2:435893/1‑133 (MQ=255)
                        aaTACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCAttct                                                                                                             <  2:852912/151‑1 (MQ=255)
                            cacaGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAAACTGCAAGGGGGGGCCGGATAAATAGTCAACCTGTGGCCATTCTTCGc                                                                                                         >  2:166782/1‑151 (MQ=255)
                             acaGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCt                                                                                                        <  1:803766/151‑1 (MQ=255)
                               aGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGa                                                                                                      <  1:433897/151‑1 (MQ=255)
                                gcgcATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAAGCTGTGACCATTCTTCGCTg                                                                                                       <  2:932546/149‑1 (MQ=255)
                                    aTTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAAACTGCAAGGGGGGGCCGGGTAAGTAGTCAACCTGTGACCATTCTTTGCTGAc                                                                                                     >  1:931363/1‑147 (MQ=255)
                                     ttCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAACCTGCAAGGGGGGACCGGATAAGTAGTCAACCTGGGACCCTTCTTCGCTGAcatca                                                                                                 >  2:881963/1‑150 (MQ=255)
                                        atcaGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAAACCGCAAGGGGGGGCCGGATAAAAAGGCAAACTGTGGACATTCTTCGCTGACAtcctcc                                                                                              >  2:358753/1‑150 (MQ=255)
                                           aGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAAACTGCAAGGGGGGACCGGATAAGTAGTCAAACCGTGACCATTCTTCGCTGACATCATcc                                                                                              >  1:396172/1‑147 (MQ=255)
                                              ggCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGCAAAACCTGACAAGCGGGGGCGGGAAAGGAGGCAACCTATGTCCATTCTTCCCTGAAAACAACCttgtg                                                                                         >  1:634607/1‑149 (MQ=255)
                                                    aCGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACca                                                                                 <  1:820355/151‑1 (MQ=255)
                                                       gTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCCGCCAGGGGGGGCCCGGTAAGAAGGCAACCTGTGACCATTCTTTGCTTACATCATCCTGGTGGCCGAcccc                                                                                >  2:418303/1‑147 (MQ=255)
                                                         tttttCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGGAAAACCTGCAAGGTGGGACCGGATAAGGATTAAACCTGTGACCATTCTTCTCTGACATCATCCTTGTGGTTGAACACATc                                                                             >  1:249237/1‑150 (MQ=255)
                                                          ttttCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCa                                                                            <  2:69064/150‑1 (MQ=255)
                                                           tttCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCAc                                                                           <  1:58637/150‑1 (MQ=255)
                                                             tCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAAACCGCCAGGGGGGGCCGGGGAAGTAGTCAACCCGTGACCATTCTTTCCCGACATCATCCTGGGGGCTGACcacaac                                                                             >  2:791821/1‑144 (MQ=255)
                                                              ccTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGGGGGGCCCGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGGTGGCCACATCAc                                                                           >  2:420733/1‑147 (MQ=255)
                                                               cTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGTAAAAACTGCAAGGGGGGGCCGGATAAATAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGaa                                                                       >  1:237605/1‑150 (MQ=255)
                                                                  cATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAAcgc                                                                   <  2:537114/151‑1 (MQ=255)
                                                                  cATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAAcgc                                                                   <  1:31510/151‑1 (MQ=255)
                                                                   atatCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAAcgcg                                                                  <  1:589475/151‑1 (MQ=255)
                                                                       ccACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGGAAAACCCGGCAGGGGGGGGCCGGAAAATAAGCAAACTGTGGCCATTCTTCGCCGACATAATCCTGGTGGCTGACCACATCACTGAAACCCGGAgg                                                              >  2:236176/1‑151 (MQ=255)
                                                                           gAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTg                                                          <  2:143078/151‑1 (MQ=255)
                                                                           gAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTg                                                          <  1:316226/151‑1 (MQ=255)
                                                                               tagtagtaACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACCTAAAACCTGCAAGGTGGGGCCGGATAAGTAGTCAACCTGTGCCCATTTTTCGCTGGCATCATTCTGGGGGGCGGCCCCATCACCGAAACGCGGTggggggggg                                                       >  2:144634/1‑145 (MQ=255)
                                                                                agtagtaACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGAAGTAAAAACTGCCAGGTGGGGCCGGAGAAGTAGTCAACCTGTGACCCTTTTTTGGTGACAACCTTCCGGTGGCCGGCCACCTAACTGAAAAGCGggggggggggggc                                                     >  1:277523/1‑144 (MQ=255)
                                                                                        cTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGACGAAAAAACTGCAAGGAGGGACCGGATAAATAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTTGTGGCTGACCACAACACTGAAAAGCGGTGGGGTGAGGGCCCTTAAtt                                             >  1:489844/1‑151 (MQ=21)
                                                                                         tGCCATCCTCGCAGCCATCGGGCGACTGGCGGGGCCGGAAAACCTGCCAGGGGGGGCCGGGTAAGTAGTCAACCCGTGACCATTCTTCGCTGACATCATCCCGGGGGCTGACCACATCACTGAAACGCGGGGGGGGGGGGGCCCTTAAttt                                            >  2:224839/1‑151 (MQ=18)
                                                                                              tCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTTCCAGGGGGGACCGGGTAAGGAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAAAGCGGTGGGGGGGGGGCCTTTAATTTACt                                         >  2:194063/1‑149 (MQ=18)
                                                                                               ccTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGa                                       <  2:256450/150‑1 (MQ=255)
                                                                                               ccTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGAt                                      <  1:915942/151‑1 (MQ=255)
                                                                                                    cAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCt                                 <  2:624883/151‑1 (MQ=255)
                                                                                                     aGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCtt                                <  1:70174/151‑1 (MQ=255)
                                                                                                     aGCCATCGGGCGACTGGCGGGGACCTAAAACCTGCCAGGGGGGACCCGGTAAGAAGTCAACACGTGACCATTTTTTGCCGAAATCACACTGGGGGGTGGCCCCATCACTGAAACGCGGGGGGGGGAGGTGCTTtaa                                               >  2:443915/1‑136 (MQ=255)
                                                                                                      gCCATCGGGCGACTGGCGGGGACGTAAAAACTGCCAGGGGGGGCCGGATAAGAAGGCAACCTGTGACCATTCTTCGCTGACATCATCCTGGGGGGTGAACACATCACTTAAACGCGGTGGGGGGGGGGCCTTAAATTTACTGATgggcct                                >  2:528409/1‑146 (MQ=17)
                                                                                                        cATCGGGCGACTGGCGGGTACGTAAAAACTGCAAGGGGGGGCCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGGGGGGGCCTTTAATTTACTGATGGCCTTc                               >  1:808011/1‑149 (MQ=21)
                                                                                                         aTCGGGCGACTGGCGGGGACGTAAAACCTGCAAGGGGGGACCGGATAAGTAGTCAAACTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGGGGGGGGAGGGCCTTAAATTTACTGATGGCCTTCAgg                            >  1:421853/1‑151 (MQ=18)
                                                                                                           cGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGCGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGt                           <  1:386251/150‑1 (MQ=255)
                                                                                                            gggCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGtca                         <  2:514353/151‑1 (MQ=255)
                                                                                                             ggCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGtcat                        <  2:158370/151‑1 (MQ=255)
                                                                                                               cGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGtcatca                      <  2:690864/151‑1 (MQ=255)
                                                                                                                  cTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGGCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGGGAGGTCCTTAAATTTACTGATGGCCTTCAGGTCATCACtt                   >  2:250805/1‑151 (MQ=255)
                                                                                                                           aCGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGTCATCACTTCTGTCATc           <  1:714522/150‑1 (MQ=255)
                                                                                                                              tAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGTCATCACTTCTGTCATCGCAt       >  2:575942/1‑151 (MQ=255)
                                                                                                                                    ccTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGTCATCACTTCTGTCATCGCATGCGAt  >  1:11426/1‑151 (MQ=255)
                                                                                                                                       gCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGTCATCACTTCTGTCATCGCATGCGAt  >  2:927929/1‑148 (MQ=255)
                                                                                                                                              |                                                                                                                                             
GTATTCCAGTTTGATGTTATCGGCAATACACAGCGCATTCATCAGTGGCTGGACGGTTTTTTCCTGCATATCCACGAGGTAGTAGTAACTGCCATCCTCGCAGCCATCGGGCGACTGGCGGGTACGTAAAACCTGCAAGGTGGGACCGGATAAGTAGTCAACCTGTGACCATTCTTCGCTGACATCATCCTGGTGGCTGACCACATCACTGAAACGCGGTGGGGTGAGGTCCTTAAATTTACTGATGGCCTTCAGGTCATCACTTCTGTCATCGCATGCGAT  >  NC_000913/266218‑266499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: